Alignment Contig 6459

                          .    :    .    :    .    :    .    :    .    :    .    :

JMSF015F04+ GGGTTAAAAGAAATAGTAGGCATAGGAAAAACAAAACTAGTGATGAGGATGGCCTCATCA
JMSF030O11+ TTAAAAGAAATAGTAGGCATAGGAAAAACAAAACTAGTGATGAGGATGGCCTCATCA
JMSF012C06+ ACTAGTGATGAGGATGGCCTCATCA
JMSF025N14+ ACTAGTGATGAGGATGGCCTCATCA
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consensus GGGTTAAAAGAAATAGTAGGCATAGGAAAAACAAAACTAGTGATGAGGATGGCCTCATCA

. : . : . : . : . : . :
JMSF015F04+ TCATCATCTTCATTTTTCTTCTCTCTCTTGTTCATCATCATCTTTGCTATTTTCTCATCA
JMSF030O11+ TCATCATCTTCATTTTTCTTCTCTCTCTTGTTCATCATCATCTTTGCTATTTTCTCATCA
JMSF012C06+ TCATCATCTTCATTTTTCTTCTCTCTCTTGTTCATCATCATCTTTGCTATTTTCTCATCA
JMSF025N14+ TCATCATCTTCATTTTTCTTCTCTCTCTTGTTCATCATCATCTTTGCTATTTTCTCATCA
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consensus TCATCATCTTCATTTTTCTTCTCTCTCTTGTTCATCATCATCTTTGCTATTTTCTCATCA

. : . : . : . : . : . :
JMSF015F04+ GCAGTGGGAGAATCAAAGACAAGTTATTTCCCAGGTGGAAGCTACCTGCAAGCTTCACTG
JMSF030O11+ GCAGTGGGAGAATCAAAGACAAGTTATTTCCCAGGTGGAAGCTACCTGCAAGCTTCACTG
JMSF012C06+ GCAGTGGGAGAATCAAAGACAAGTTATTTCCCAGGTGGAAGCTACCTGCAAGCTTCACTG
JMSF025N14+ GCAGTGGGAGAATCAAAGACAAGTTATTTCCCAGGTGGAAGCTACCTGCAAGCTTCACTG
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consensus GCAGTGGGAGAATCAAAGACAAGTTATTTCCCAGGTGGAAGCTACCTGCAAGCTTCACTG

. : . : . : . : . : . :
JMSF015F04+ AAGAAACAAGGCAAGATTAT
JMSF030O11+ AAGAAACAAGGCAAGATTATTGGGAAGAAGCCAAAGCTGCCATATGAAGTTCAATATTTC
JMSF012C06+ AAGAAACAAGGCAAGATTATTGGGAAGAAGCCAAAGCTGCCATATGAAGTTCAATATTTC
JMSF025N14+ AAGAAACAAGGCAAGATTATTGGGAAGAAGCCAAAGCTGCCATATGAAGTTCAATATTTC
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consensus AAGAAACAAGGCAAGATTATTGGGAAGAAGCCAAAGCTGCCATATGAAGTTCAATATTTC

. : . : . : . : . : . :
JMSF030O11+ CCACAAGTTGTTGACCACTTCAGTTTTATACCCAGTGGCTACAAAATCTTCTACCAGAAA
JMSF011I05+ AGAAA
JMSF012C06+ CCACAAGTTGTTGACCACTTCAGTTTTATACCCAGTGGCTACAAAATCTTCTACCAGAAA
JMSF025N14+ CCACAAGTTGTTGACCACTTCAGTTTTATACCCAGTGGCTACAAAATCTTCTACCAGAAA
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consensus CCACAAGTTGTTGACCACTTCAGTTTTATACCCAGTGGCTACAAAATCTTCTACCAGAAA

. : . : . : . : . : . :
JMSF030O11+ TACCTCATCAACAAGGACCATTGGCAAAAGGGAGGCCCAATGTTTGTGTACACTGGGAAT
JMSF011I05+ TACCTCATCAACAAGGACCATTGGCAAAAGGGAGGCCCAATGTTTGTGTACACTGGGAAT
JMSF012C06+ TACCTCATCAACAAGGACCATTGGCAAAAGGGAGGCCCAATGTTTGTGTACACTGGGAAT
JMSF025N14+ TACCTCATCAACAAGGACCATTGGCAAAAGGGAGGCCCAATGTTTGTGTACACTGGGAAT
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consensus TACCTCATCAACAAGGACCATTGGCAAAAGGGAGGCCCAATGTTTGTGTACACTGGGAAT

. : . : . : . : . : . :
JMSF030O11+ GAAGGAGATATTGATTGGTTTGCTGCAAATACTGGCTTCATGCTTGATATTGCCCCAAAG
JMSF011I05+ GAAGGAGATATTGATTGGTTTGCTGCAAATACTGGCTTCATGCTTGATATTGCCCCAAAG
JMSF012C06+ GAAGGAGATATTGATTGGTTTGCTGCAAATACTGGCTTCATGCTTGATATTGCCCCAAAG
JMSF025N14+ GAAGGAGATATCGATTGGTTTGCTGCAAATACTGGCTTCATGCTTGATATTGCCCCAAAG
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consensus GAAGGAGATATTGATTGGTTTGCTGCAAATACTGGCTTCATGCTTGATATTGCCCCAAAG

. : . : . : . : . : . :
JMSF030O11+ TTTCATGCTCTTCTACTCTTCATTGAGCATAGGTTTTATGGAGAATCAATGCCATTTGGG
JMSF011I05+ TTTCATGCTCTTCTACTCTTCATTGAG-----GTTTTATGGAGAATCAATGCCATTTGGG
JMSF012C06+ TTTCATGCTCTTCTACTCTTCATTGAGCATAGGTTTTATGGAGAATCAATGCCATTTGGG
JMSF025N14+ TTTCATGCTCTTCTACTCTTCATTGAGCATAGGTTTTATGGAGAATCAATGCCATTTGGG
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consensus TTTCATGCTCTTCTACTCTTCATTGAGCATAGGTTTTATGGAGAATCAATGCCATTTGGG

. : . : . : . : . : . :
JMSF030O11+ AAGCAATCCTACAAGTCTGCAAAGACATTGGGGTACTTGAATTCACAGCAGGCATTGGCT
JMSF011I05+ AAGCAATCCTACAAGTCTGCAAAGACATTGGGGTACTTGAATTCACAGCAGGCATTGGCT
JMSF012C06+ AAGCAATCCTACAAGTCTGCAAAGACATTGGGGTACTTGAATTCAC
JMSF025N14+ AAGCAATCCTACAAGTCTGCAAAGACATTGGGGTACTTGAATTCACAGCAGGCATTGGCT
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consensus AAGCAATCCTACAAGTCTGCAAAGACATTGGGGTACTTGAATTCACAGCAGGCATTGGCT

. : . : . : . : . : . :
JMSF030O11+ GATTATGCCATTCTTATAAGGAGTTTGAAGAAAAATCTATCTTCTGAGGCTTCCCCTGTT
JMSF011I05+ GATTATGCCATTCTTATAAGGAGTTTGAAGAAAAATCTATCTTCTGAGGCTTCCCCTGTT
JMSF025N14+ GATTATGCCATTCTTATAAGGAGTTTGAAGAAAAATCTATCTTCTGAGGCTTCCCCTGTT
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consensus GATTATGCCATTCTTATAAGGAGTTTGAAGAAAAATCTATCTTCTGAGGCTTCCCCTGTT

. : . : . : . : . : . :
JMSF030O11+ GTGGTGTTTGGTGGCTCCTATGGAGGAATGCTTGCTGCTTGGTTCA
JMSF011I05+ GTGGTGTTTGGTGGCTCCTATGGAGGAATGCTTGCTGCTTGGTTCA
JMSF025N14+ GTGGTGTTTGGTGGCTCCTATGGAGGAATGCTTGCTGCTTGGTTCAGACTCAAATACCCA
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consensus GTGGTGTTTGGTGGCTCCTATGGAGGAATGCTTGCTGCTTGGTTCAGACTCAAATACCCA

. : . : . : . : . : . :
JMSF025N14+ CACGTGGCAATTGGTGCATTGGCATCTTCAGCCCCAAT
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consensus CACGTGGCAATTGGTGCATTGGCATCTTCAGCCCCAAT