Alignment Contig 5973

                          .    :    .    :    .    :    .    :    .    :    .    :

JMFF024N14+ ATCAATATCAGATTCTCTCTCCTGTTCTTCTCTCTCTAATGCTTGTGGTGCCATCTCGGC
JMFF030B08+ ATCAATATCAGATTCTCTCTCCTGTTCTTCTCTCTCTAATGCTTGTGGTGCCATCTCGGC
JMFF012P03+ ATCAATATCAGATTCTCTCTCCTGTTCTTCTCTCTCTAATGCTTGTGGTGCCATCTCGGC
JMFF027E11+ CTCTAATGCTTGTGGTGCCATCTCGGC
JMFF038C23+ TCTCCTGTTCTTCTCTCTCTAATGCTTGTGGTGCCATCTCGGC
JMFF011A01+ TCTCCTGTTCTTCTCTCTCTAATGCTTGTGGTGCCATCTCGGC
JMFS051C09+ CTGTTCTTCTCTCTCTAATGCTTGTGGTGCCATCTCGGC
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consensus ATCAATATCAGATTCTCTCTCCTGTTCTTCTCTCTCTAATGCTTGTGGTGCCATCTCGGC

. : . : . : . : . : . :
JMFF024N14+ TGCAAACAATCAAGCCCAGCCGCTGGTGATCGCTGTGTTGTCGATCTCCTCAAGATTCTG
JMFF030B08+ TGCAAACAATCAAGCCCAGCCGCTGGTGATCGCTGTGTTGTCGATCTCCTCAAGATTCTG
JMFF012P03+ TGCAAACAATCAAGCCCAGCCGCTGGTGATCGCTGTGTTGTCGATCTCCTCAAGATTCTG
JMFF027E11+ TGCAAACAATCAAGCCCAGCCGCTGGTGATCGCTGTGTTGTCGATCTCCTCAAGATTCTG
JMFF038C23+ TGCAAACAATCAAGCCCAGCCGCTGGTGATCGCTGTGTTGTCGATCTCCTCAAGATTCTG
JMFF011A01+ TGCAAACAATCAAGCCCAGCCGCTGGTGATCGCTGTGTTGTCGATCTCCTCAAGATTCTG
JMFS051C09+ TGCAAACAATCAAGCCCAGCCGCTGGTGATCGCTGTGTTGTCGATCTCCTCAAGATTCTG
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consensus TGCAAACAATCAAGCCCAGCCGCTGGTGATCGCTGTGTTGTCGATCTCCTCAAGATTCTG

. : . : . : . : . : . :
JMFF024N14+ ATTTCATAGATAAATGACTTGTTGAGGTGATATAGTAAGAAAGTTCCTAATAAATGGCAT
JMFF030B08+ ATTTCATAGATAAATGACTTGTTGAGGTGATATAGTAAGAAAGTTCCTAATAAATGGCAT
JMFF012P03+ ATTTCATAGATAAATGACTTGTTGAGGTGATATAGTAAGAAAGTTCCTAATAAATGGCAT
JMFF027E11+ ATTTCATAGATAAATGACTTGTTGAGGTGATATAGTAAGAAAGTTCCTAATAAATGGCAT
JMFF038C23+ ATTTCATAGATAAATGACTTGTTGAGGTGATATAGTAAGAAAGTTCCTAATAAATGGCAT
JMFF011A01+ ATTTCATAGATAAATGACTTGTTGAGGTGATATAGTAAGAAAGTTCCTAATAAATGGCAT
JMFS051C09+ ATTTCATAGATAAATGACTTGTTGAGGTGATATAGTAAGAAAGTTCCTAATAAATGGCAT
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consensus ATTTCATAGATAAATGACTTGTTGAGGTGATATAGTAAGAAAGTTCCTAATAAATGGCAT

. : . : . : . : . : . :
JMFF024N14+ CAGTGGGTGTACCACCTGCTTCTGGTATGAGAGAATCCAGTGGTCACACTGTTGGTGTTG
JMFF030B08+ CAGTGGGTGTACCACCTGCTTCTGGTATGAGAGAATCCAGTGGTCACACTGTTGGTGTTG
JMFF012P03+ CAGTGGGTGTACCACCTGCTTCTGGTATGAGAGAATCCAGTGGTCACACTGTTGGTGTTG
JMFF027E11+ CAGTGGGTGTACCACCTGCTTCTGGTATGAGAGAATCCAGTGGTCACACTGTTGGTGTTG
JMFF038C23+ CAGTGGGTGTACCACCTGCTTCTGGTATGAGAGAATCCAGTGGTCACACTGTTGGTGTTG
JMFF011A01+ CAGTGGGTGTACCACCTGCTTCTGGTATGAGAGAATCCAGTGGTCACACTGTTGGTGTTG
JMFS051C09+ CAGTGGGTGTACCACCTGCTTCTGGTATGAGAGAATCCAGTGGTCACACTGTTGGTGTTG
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consensus CAGTGGGTGTACCACCTGCTTCTGGTATGAGAGAATCCAGTGGTCACACTGTTGGTGTTG

. : . : . : . : . : . :
JMFF024N14+ ATAGTTTGCCTGAGGAGATGAATGACATGAAAATCAGGGATGATAAGGATATGGAAGCAG
JMFF030B08+ ATAGTTTGCCTGAGGAGATGAATGACATGAAAATCAGGGATGATAANGATATGGAAGCAG
JMFF012P03+ ATAGTTTGCCTGAGGAGATGAATGACATGAAAATCAGGGATGATAAGGATATGGAAGCAG
JMFF027E11+ ATAGTTTGCCTGAGGAGATGAATGACATGAAAATCAGGGATGATAAGGATATGGAAGCAG
JMFF038C23+ ATAGTTTGCCTGAGGAGATGAATGACATGAAAATCAGGGATGATAAGGATATGGAAGCAG
JMFF011A01+ ATAGTTTGCCTGAGGAGATGAATGACATGAAAATCAGGGATGATAAGGATATGGAAGCAG
JMFS051C09+ ATAGTTTGCCTGAGGAGATGAATGACATGAAAATCAGGGATGATAAGGATATGGAAGCAG
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consensus ATAGTTTGCCTGAGGAGATGAATGACATGAAAATCAGGGATGATAAGGATATGGAAGCAG

. : . : . : . : . : . :
JMFF024N14+ CAGTTGTTGATGGTAATGGGACTGAGGCAGGTCACATAATAGTGACAACTATTGGTGGTC
JMFF030B08+ CAGTTGTTGANGGTAATGGGACTGAGGCAGGTCACATAATAGTGAC
JMFF012P03+ CAGTTGTTGATGGTAATGGGACTGAGGCAGGTCACATAATAGTGACAACTATTGGTGGTC
JMFF027E11+ CAGTTGTTGATGGTAATGGGACTGAGGCAGGTCACATAATAGTGACAACTATTGGTGGTC
JMFF038C23+ CAGTTGTTGATGGTAATGGGACTGAGGCAGGTCACATAATAGTGACAACTATTGGTGGTC
JMFF011A01+ CAGTTGTTGATGGTAATGGGACTGAGGCAGGTCACATAATAGTGACAACTATTGGTGGTC
JMFS051C09+ CAGTTGTTGATGGTAATGGGACTGAGGCAGGTCACATAATAGTGACAACTATTGGTGGTC
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consensus CAGTTGTTGATGGTAATGGGACTGAGGCAGGTCACATAATAGTGACAACTATTGGTGGTC

. : . : . : . : . : . :
JMFF024N14+ AAAATGGTCAACCAAAACAGACTATAAGTTACATGGCTGAACGAATTGTTGGGCATGGAT
JMFF012P03+ AAAATGGTCAACCAAAACAGACTATAAGTTACATGGCTGAACGAATTGTTGGGCATGGAT
JMFF027E11+ AAAATGGTCAACCAAAACAGACTATAAGTTACATGGCTGAACGAATTGTTGGGCATGGAT
JMFF038C23+ AAAATGGTCAACCAAAACAGACTATAAGTTACGTGGCTGAACGAATTGTTGGGCATGGAT
JMFF011A01+ AAAATGGTCAACCAAAACAGACTATAAGTTACGTGGCTGAACGAATTGTTGGGCATGGAT
JMFS051C09+ AAAATGGTCAACCAAAACAGACTATAAGTTACATGGCTGAACGAATTGTTGGGCATGGAT
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consensus AAAATGGTCAACCAAAACAGACTATAAGTTACATGGCTGAACGAATTGTTGGGCATGGAT

. : . : . : . : . : . :
JMFF024N14+ CATTTGGTGTAGTATTTCAGGCTAAATGCTTAGAAACTGGTGAAACTGTTGCTATAAAGA
JMFF012P03+ CATTTGGTGTAGTATTTCAGGCTAAATGCTTAGAAACTGGTGAAACTGTTGCTATAAAGA
JMFF027E11+ CATTTGGTGTAGTATTTCAGGCTAAATGCTTAGAAACTGGTGAAACTGTTGCTATAAAGA
JMFF038C23+ CATTTGGTGTAGTATTTCAGGCTAAATGCTTAGAAACTGGTGAAACTGTTGCTATAAAGA
JMFF011A01+ CATTTGGTGTAGTATTTCAGGCTAAATGCTTAGAAACTGGTGAAACTGTTGCTATAAAGA
JMFS051C09+ CATTTGGTGTAGTATTTCAGGCTAAATGCTTAGAAACTGGTGAAACTGTTGCTATAAAGA
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consensus CATTTGGTGTAGTATTTCAGGCTAAATGCTTAGAAACTGGTGAAACTGTTGCTATAAAGA

. : . : . : . : . : . :
JMFF024N14+ AAGTTCTTCAAGACAA
JMFF012P03+ AAGTTCTTCAAGACAAAAGATACAAGAACCGGGAATTACAGACCATGCGTCTTCTTGACC
JMFF027E11+ AAGTTCTTCAAGACAAAAGATACAAGAACCGGGAATTACAGACCGTGCGTCTTCTTGACC
JMFF038C23+ AAGTTCTTCAAGACAAAAGATACAAGAACCGGGAATTACAGACCATGCGTCTTCTTGACC
JMFF011A01+ AAGTTCTTCAAG
JMFS051C09+ AAGTTCTTCAAGACAAAAGATACAAGAACCGGGAATTACAGACCATTCGTCTTCTTGACC
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consensus AAGTTCTTCAAGACAAAAGATACAAGAACCGGGAATTACAGACCATGCGTCTTCTTGACC

. : . : . : . : . : . :
JMFF012P03+ ACCCAAATGTAGTGTCATTGAAGCACTGCTTCTTTTCTACAACTGATAAGGATGAACTGT
JMFF027E11+ ACCCAAATGTAGTGTCATTGAAGCACTGCTTCTTTTCTACAACTGATAAGGATGAACTGT
JMFF038C23+ ACCCAAATGTAGTGTCATTGAAGCACTGCTTCTTTTCTACAACTGATAAGGATGAACTGT
JMFS051C09+ ACCCAAATGTAGTGTCATTGAAGCACTGCTTCTTTTCTACAACTGATAAGGATGAACTGT
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consensus ACCCAAATGTAGTGTCATTGAAGCACTGCTTCTTTTCTACAACTGATAAGGATGAACTGT

. : . : . : . : . : . :
JMFF012P03+ ATCTTAATCTGGTTCT
JMFF027E11+ ATCTTA
JMFF038C23+ ATCTTAATCTGGTTCTTGAATATGTACCTGAAA
JMFS051C09+ ATCTTAATCTGGTTCT
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consensus ATCTTAATCTGGTTCTTGAATATGTACCTGAAA