Alignment Contig 5111

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JMSF026A20+ TGGCGCCCAGCTCGTAGTGTAGTTTTGGATTTTATATTTCTTTTTTTT-CTTTTTAATTT
JMSF018J08+ GGCGCCCAGCTCGTAGTGTAGTTTTGGATTTTATATTTCTTTTTTTTTCTTTTTAATTT
rJMSF016L11- GGCGCCCAGCTCGTAGTGTAGTTTTGGATTTTATATTTCTTTTTTTTTCTTTTTAATTT
JMSF016L11+ GGCGCCCAGCTCGTAGTGTAGTTTTGGATTTTATATTTCTTTTTTTTTCTTTTTAATTT
JMSF042G21+ GGCGCCCAGCTCGTAGTGTAGTTTTGGATTTTATATTTCTTTTTTTT-CTTTTTAATTT
JMSF013J09+ GCGCCCAGCTCGTAGTGTAGTTTTGGATTTTATATTTCTTTTTTTTTCTTTTTAATTT
JMSF002H03+ GCGCCCAGCTCGTAGTGTAGTTTTGGATTTTATATTTCTTTTTTTTTCTTTTTAATTT
JMFF019K24+ GCGCCCAGCTCGTAGTGTAGTTTTGGATTTTATATTTCTTTTTTTTTCTTTTTAATTT
JMSF013J01+ GGCGCCCAGCTCGTAGTGTAGTTTTGGATTTTATATTTCTTTTTTTTTCTTTTTAATTT
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consensus TGGCGCCCAGCTCGTAGTGTAGTTTTGGATTTTATATTTCTTTTTTTTTCTTTTTAATTT

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JMSF026A20+ TTTTTCTCTGATTTTACGAATAATTGCAATAATCACTACTGATCTATCCATCGTCTTGAG
JMSF018J08+ TTTTTCTCTGATTTTACGAATAATTGCAATAATCACTACTGATCTATCCATCGTCTTGAG
rJMSF016L11- TTTTTCTCTGATTTTACGAATAATTGCAATAATCACTACTGATCTATCCATCGTCTTGAG
JMSF016L11+ TTTTTCTCTGATTTTACGAATAATTGCAATAATCACTACTGATCTATCCATCGTCTTGAG
JMSF042G21+ TTTTTCTCTGATTTTACGAATAATTGCAATAATCACTACTGATCTATCCATCGTCTTGAG
JMSF013J09+ TTTTTCTCTGATTTTACGAATAATTGCAATAATCACTACNGATCTATCCATCGTCTTGAG
JMSF002H03+ TTTTTCTCTGATTTTACGAATAATTGCAATAATCACTACTGATCTATCCATCGTCTTGAG
JMFF019K24+ TTTTTCTCTGATTTTACGAATAATTGCAATAATCACTACTGATCTATCCATCGTCTTGAG
JMSF013J01+ TTTTTCTCTGATTTTACGAATAATTGCAATAATCACTACTGATCTATCCATCGTCTTGAG
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consensus TTTTTCTCTGATTTTACGAATAATTGCAATAATCACTACTGATCTATCCATCGTCTTGAG

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JMSF026A20+ CTGGAGGTGTGGATTCGTTAAGGAATCAAACCTGTCAATCTCAGATTAGGGTTTCCCGCC
JMSF018J08+ CTGGAGGTGTGGATTCGTTAAGGAATCAAACCTGTCAATCTCAGATTAGGGTTTCCCGCC
rJMSF016L11- CTGGAGGTGTGGATTCGTTAAGGAATCAAACCTGTCAATCTCAGATTAGGGTTTCCCGCC
JMSF016L11+ CTGGAGGTGTGGATTCGTTAAGGAATCAAACCTGTCAATCTCAGATTAGGGTTTCCCGCC
JMSF042G21+ CTGGAGGTGTGGATTCGTTAAGGAATCAAACCTGTCAATCTCAGATTAGGGTTTCCCGCC
JMSF013J09+ CTGGAGGTGTGGATTCGTTAAGGAATCAAACCTGTCAATCTCAGATTAGGGTTTCCCGCC
JMSF002H03+ CTGGAGGTGTGGATTCGTTAAGGAATCAAACCTGTCAATCTCAGATTAGGGTTTCCCGCC
JMFF019K24+ CTGGAGGTGTGGATTCGTTAAGGAATCAAACCTGTCAATCTCAGATTAGGGTTTCCCGCC
JMSF013J01+ CTGGAGGTGTGGATTCGTTAAGGAATCAAACCTGTCAATCTCAGATTAGGGTTTCCCGCC
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consensus CTGGAGGTGTGGATTCGTTAAGGAATCAAACCTGTCAATCTCAGATTAGGGTTTCCCGCC

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JMSF026A20+ TTTGATAATCGGTCGCGCCATTTCCC-TAATATATACACTTTATTATAGGCAGATACATA
JMSF018J08+ TTTGATAATCGGTCGCGCCATTTCCCGTAATATATACACTTTATTATAGGCA
rJMSF016L11- TTTGATAATCGGTCGCGCCATTTCCCGTAATATATACACTTTATTATAGGCAGATACATA
JMSF016L11+ TTTGATAATCGGTCGCGCCATTTCCCGTAATATATACACTTTATTATAGGCAGATACATA
JMSF042G21+ TTTGATAATCGGTCGCGCCATTTCCCGTAATATATACACTTTATTATAGGCAGATACATA
JMSF013J09+ TTTGATAATCGGTCGCGCCATTTCCCGTAATATATACACTTTATTATAGGCAGATACATA
JMSF002H03+ TTTGATAATCGGTCGCGCCATTTCCCGTAATATATACACTTTATTATAGGCAGATACATA
JMFF019K24+ TTTGATAATCGGTCGCGCCATTTCCCGTAATATATACACTTTATTATAGGCAGATACATA
JMSF013J01+ TTTGATAATCGGTCGCGCCATTTCCCGTAATATATACACTTTATTATAGGCAGATACATA
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consensus TTTGATAATCGGTCGCGCCATTTCCCGTAATATATACACTTTATTATAGGCAGATACATA

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JMSF026A20+ TATTTCTATTTCTATATCTATATCTAATCCGCAGAAAATTTTCAGTTTTTTTCTTCGGAA
rJMSF016L11- TATTTCTATTTCTATATCTATATCTAATCCGCAGAAAATTTTCAGTTTTTTTCTTCGGAA
JMSF016L11+ TATTTCTATTTCTATATCTATATCTAATCCGCAGAAAATTTTCAGTTTTTTTCTTCGGAA
JMSF042G21+ TATTTCTATTTCTATATCTATACCTAATCCGCAGAAAATTTTCAGTTTTTTTCTTCGGAA
JMSF013J09+ TATTTCTATTTCTATATCTATATCTAATCCGCAGAAAATTTTCAGTTTTTTTCTTCGGAA
JMSF002H03+ TATTTCTATTTCTATATCTATATCTAATCCGCAGAAAATTTTCAGTTTTTTTCTTCGGAA
JMFF019K24+ TATTTCTATTTCTATATCTATATCTAATCCGCAGAAAATTTTCAGTTTTTTTCTTCGGAA
JMSF013J01+ TATTTCTATTTCTATATCTATATCTAATCCGCAGAAAATTTTCAGTTTTTTTCTTCGGAA
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consensus TATTTCTATTTCTATATCTATATCTAATCCGCAGAAAATTTTCAGTTTTTTTCTTCGGAA

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JMSF026A20+ ATTTCTAATCGAGATTTTTCATTGTTGTTCCGTATATATNAAAAAAAAA
rJMSF016L11- ATT
JMSF016L11+ ATTTCTAATCGAGATTTTTCATTGTTGTTCCGTATATATAAAAAAAAAA
JMSF042G21+ ATTTCTAATCGAGATTTTTCATTGTTGTTCCGTATATATAAAAAAAAAA
JMSF013J09+ ATTTCTAATCGAGATTTTTCATTGTTGTTCCGTATAT
JMSF002H03+ ATTTCTAATCGAGATTTTTCATTGTTGTTCCGTATAT
JMFF019K24+ ATTTCTAATCGAGATTTTTCATTGTTGTTCCGTATATAT
JMSF013J01+ ATTTCTAATCGAGATTTTTCATTGTTGTTCCGCATATATNANAAAAAAA
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consensus ATTTCTAATCGAGATTTTTCATTGTTGTTCCGTATATATAAAAAAAAAA