Alignment Contig 4650

                          .    :    .    :    .    :    .    :    .    :    .    :

JMFF045L23+ CCGGTGTGCTTTGAAATGTTCTGTTCATATTGAATTTTTGATGAATTTTAGTTTCTTCCA
JMFF028M06+ GTGTGCTTTGAAATGTTCTGTTCATATTGAATTTTTGATGAATTTTAGTTTCTTCCA
JMFF011B04+ GTGTGCTTTGAAATGTTCTGTTCATATTGAATTTTTGATGAATTTTAGTTTCTTCCA
JMFF040L12+ GTGTGCTTTGAAATGTTCTGTTCATATTGAATTTTTGATGAATTTTAGTTTCTTCCA
____________________________________________________________
consensus CCGGTGTGCTTTGAAATGTTCTGTTCATATTGAATTTTTGATGAATTTTAGTTTCTTCCA

. : . : . : . : . : . :
JMFF045L23+ TCAATCATCATACCATTAGTTGAATTAGAGTCATGGGAAGTTCTGGGGAGTGCAGAGCTA
JMFF028M06+ TCAATCATCATACCATTAGTTGAATTAGAGTCATGGGAAGTTCTGGGGAGTGCAGAGCTA
JMFF011B04+ TCAATCATCATACCATTAGTTGAATTAGAGTCATGGGAAGTTCTGGGGAGTGCAGAGCTA
JMFF040L12+ TCAATCATCATACCATTAGTTGAATTAGAGTCATGGGAAGTTCTGGGGAGTGCAGAGCTA
____________________________________________________________
consensus TCAATCATCATACCATTAGTTGAATTAGAGTCATGGGAAGTTCTGGGGAGTGCAGAGCTA

. : . : . : . : . : . :
JMFF045L23+ AACCCATTGACGTTCCGGCGAGCGGGTTGGTTTGGGTCCGCCGGCGAAATGGACAGTGGT
JMFF028M06+ AACCCATTGACGTTCCGGCGAGCGGGTTGGNTTGGGNCCGCCGGCGAAATGGACAGTGGT
JMFF011B04+ AACCCATTGACGTTCCGGCGAGCGGGTTGGTTTGGGTCCGCCGGCGAAATGGACAGTGGT
JMFF040L12+ AACCCATTGACGTTCCGGCGAGCGGGTTGGTTTGGGTCCGCCGGCGAAATGGACAGTGGT
____________________________________________________________
consensus AACCCATTGACGTTCCGGCGAGCGGGTTGGTTTGGGTCCGCCGGCGAAATGGACAGTGGT

. : . : . : . : . : . :
JMFF045L23+ GGCCGGGCCAAATTTTGTGCCCGGAAGAGTTGCCCGAGAGAAGTTCGGTTTCTGGGAGAT
JMFF028M06+ GGCCGGGCCAAATTTTGTGCCCGGAAGAGTTGCCCGAGAGAAGTTCGGTTTCTGGGAGAT
JMFF011B04+ GGCCGGGCCAAATTTTGTGCCCGGAAGAGTTGCCCGAGAGAAGTTCGGTTTCTGGGAGAT
JMFF040L12+ GGCCGGGCCAAATTTTGTGCCCGGAAGAGTTGCCCGAGAGAAGTTCGGTTTCTGGGAGAT
____________________________________________________________
consensus GGCCGGGCCAAATTTTGTGCCCGGAAGAGTTGCCCGAGAGAAGTTCGGTTTCTGGGAGAT

. : . : . : . : . : . :
JMFF045L23+ CTGGAACTCCAGTTAAACTCCTTGGATTAAAGGATACATGTATAGACTGGCATAATCTTG
JMFF028M06+ CTGGAACTCCAGTTAAACTCCTTGGAT
JMFF011B04+ CTGGAACTCCAGTTAAACTCCTTGGATTAAAGGATACATGTATAGACTGGCATAATCTTG
JMFF040L12+ CTGGAACTCCAGTTAAACTCCTTGGATTAAAGGATACATGTATAGACTGGCATAATCTTG
____________________________________________________________
consensus CTGGAACTCCAGTTAAACTCCTTGGATTAAAGGATACATGTATAGACTGGCATAATCTTG

. : . : . : . : . : . :
JMFF045L23+ AGAACTCTAAGCGAGTTAGGGCTTTTCGTTGTGGGGAGTATGATAAGTGCATTGAGAAAG
JMFF011B04+ AGAACTCTAAGCGAGTTAGGGCTTTTCGTTGTGGGGAGTATGATAAGTGCATTGAGAAAG
JMFF040L12+ AGAACTCTAAGCGAGTTAGGGCTTTTCGTTGTGGGGAGTATGATAAGTGCATTGAGAAAG
____________________________________________________________
consensus AGAACTCTAAGCGAGTTAGGGCTTTTCGTTGTGGGGAGTATGATAAGTGCATTGAGAAAG

. : . : . : . : . : . :
JMFF045L23+ CTTTGTTAGTTGCAGCTAGTGGTTCTAGGAAGGCAGTGAAATATAACCGCAGAGAAGATG
JMFF011B04+ CTTTGTTAGTTGCAGCTAGTGGTTCTAGGAAGGCAGTGAAATATAACCGCAGAGAAGATG
JMFF040L12+ CTTTGTTAGTTGCAGCTAGTGGTTCTAGGAAGGCAGTGAAATATAACCGCAGAGAAGATG
____________________________________________________________
consensus CTTTGTTAGTTGCAGCTAGTGGTTCTAGGAAGGCAGTGAAATATAACCGCAGAGAAGATG

. : . : . : . : . : . :
JMFF045L23+ CCATTCTTCATGCTCTTGAGATTGAAAGAAGTTTCCTTGGAAAAGCTAATCCCAGTTTTT
JMFF011B04+ CCATTCTTCATGCTCTTGAGATTGAAAGAAGTTTCCTTGGAAAAGCTAATCCCAGTTTTT
JMFF040L12+ CCATTCTTCATGCTCTTGAGATTGAAAGAAGTTTCCTTGGAAAAGCTAATCCCAGTTTTT
____________________________________________________________
consensus CCATTCTTCATGCTCTTGAGATTGAAAGAAGTTTCCTTGGAAAAGCTAATCCCAGTTTTT

. : . : . : . : . : . :
JMFF045L23+ CTTTGGGATTAGATAAGCAAAATGGAGGGCAAAATCTTATTGGAGAGTTACCTGCTTCGT
JMFF011B04+ CTTTGGGATTAGATAAGCAAAATGGAGGGCAAAATCTTATTGGAGAGTTACCTGCTTCGT
JMFF040L12+ CTTTGGGATTAGATAAGCAAAATGGAGGGCAAAATCTTATTGGAGAGTTACCTGCTTCGT
____________________________________________________________
consensus CTTTGGGATTAGATAAGCAAAATGGAGGGCAAAATCTTATTGGAGAGTTACCTGCTTCGT

. : . : . : . : . : . :
JMFF045L23+ CCCGAGAAGGAATTGAAAATGTGAATGGGGATTATAGTAGCTCTGAAGATAATTCACGTT
JMFF011B04+ C
JMFF040L12+ CCCGAGAAGGAATTGAAAATGTGAATGGGGATTATAGTAGCTCTGAAGA
____________________________________________________________
consensus CCCGAGAAGGAATTGAAAATGTGAATGGGGATTATAGTAGCTCTGAAGATAATTCACGTT

. : . : . : . : . : . :
JMFF045L23+ CAAAACCTAAATTATCGCACTCT
____________________________________________________________
consensus CAAAACCTAAATTATCGCACTCT