Alignment Contig 4547

                          .    :    .    :    .    :    .    :    .    :    .    :

JMFF021O08+ ACTCTTCTTCTTCGCAGAGTTTTATTAATTTCTCTTCGAATTTATCGTTTTCCTTTTGGG
JMFF027O14+ ACTCTTCTTCTTCGCAGAGTTTTATTAATTTCTCTTCGAATTTATCGTTTTCCTTTTGGG
JMFF023N14+ ACTCTTCTTCTTCGCAGAGTTTTATTAATTTCTCTTCGAATTTATCGTTTTCCTTTTGGG
____________________________________________________________
consensus ACTCTTCTTCTTCGCAGAGTTTTATTAATTTCTCTTCGAATTTATCGTTTTCCTTTTGGG

. : . : . : . : . : . :
JMFF021O08+ TATTCGATACTTGGTATATATGGCGGAAGAAACTAAGGCACCCGCTCAAGAGACGCCGGC
JMFF027O14+ TATTCGATACTTGGTATATATGGCGGAAGAAACTAAGGCACCCGCTCAAGAGACGCCGGC
JMFF023N14+ TATTCGATACTTGGTATATATGGCGGAAGAAACTAAGGCACCCGCTCAAGAGACGCCGGC
____________________________________________________________
consensus TATTCGATACTTGGTATATATGGCGGAAGAAACTAAGGCACCCGCTCAAGAGACGCCGGC

. : . : . : . : . : . :
JMFF021O08+ ACAAGAAGTGGCGCCGGCGACGGCGCCGGTGCCGGAGGCCGCAGCTGAGGTTGTGGAGAA
JMFF027O14+ ACAAGAAGTGGCGCCGGCGACGGCGCCGGTGCCGGAGGCCGCAGCTGAGGTTGTGGAGAA
JMFF023N14+ ACAAGAAGTGGCGCCGGCGACGGCGCCGGTGCCGGAGGCCGCAGCTGAGGTTGTGGAGAA
JMFF036K13+ AAGTGGCGCCGGCGACGGCGCCGGTGCCGGAGGCCGCANCTGAGGTTGTGGAGAA
JMFF018K08+ AAGTGGCGCCGGCGACGGCGCCGGTGCCGGAGGCCGCAGCTGAGGTTGTGGAGAA
JMFF034F01+ AAGTGGCGCCGGCGACGGCGCCGGTGCCGGAGGCCGCAGCTGAGGTTGTGGAGAA
____________________________________________________________
consensus ACAAGAAGTGGCGCCGGCGACGGCGCCGGTGCCGGAGGCCGCAGCTGAGGTTGTGGAGAA

. : . : . : . : . : . :
JMFF021O08+ GGAGGCGACGCCGGAGCCGGAGCCTGAGAAGACGGCTGAGGAGGAGAAGGAGAAGGCTGC
JMFF027O14+ GGAGGCGACGCCGGAGCCGGAGCCTGAGAAGACGGCTGAGGAGGAGAAGGAGAAGGCTGC
JMFF023N14+ GGAGGCGACGCCGGAGCCGGAGCCTGAGAAGACGGCTGAGGAGGAGAAGGAGAAGGCTGC
JMFF036K13+ GGAGGCGACGCCGGAGCCGGAGCCTGAGAAGACGGCTGAGGAGGAGAAGGAGAAGGCTGC
JMFF018K08+ GGAGGCGACGCCGGAGCCGGAGCCTGAGAAGACGGCTGAGGAGGAGAAGGAGAAGGCTGC
JMFF034F01+ GGAGGCGACGCCGGAGCCGGAGCCTGAGAAGACGGCTGAGGAGGAGAAGGAGAAGGCTGC
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consensus GGAGGCGACGCCGGAGCCGGAGCCTGAGAAGACGGCTGAGGAGGAGAAGGAGAAGGCTGC

. : . : . : . : . : . :
JMFF021O08+ GGTTACGGAGTCGGGTTCGTTTAAGGAGGAGAGCAACAAGGTGGAGGAGCTTCCCAACCC
JMFF027O14+ GGTTACGGAGTCGGGTTCGTTTAAGGAGGAGAGCAACAAGGTGGAGGAGCTTCCCAACCC
JMFF023N14+ GGTTACGGAGTCGGGTTCGTTTAAGGAGGAGAGCAACAAGGTGGAGGAGCTTCCCAACCC
JMFF036K13+ GGTTACGGAGTCGGGTTCGTTTAAGGAGGAGAGCAACNAGGTGGAGGAGCTTCCCAACCC
JMFF018K08+ GGTTACGGAGTCGGGTTCGTTTAAGGAGGAGAGCAACAAGGTGGAGGAGCTTCCCAACCC
JMFF034F01+ GGTTACGGAGTCGGGTTCGTTTAAGGAGGAGAGCAACAAGGTGGAGGAGCTTCCCAACCC
____________________________________________________________
consensus GGTTACGGAGTCGGGTTCGTTTAAGGAGGAGAGCAACAAGGTGGAGGAGCTTCCCAACCC

. : . : . : . : . : . :
JMFF021O08+ GGAGAAGAAGGCGTTGGATGAGTTTAAGGCGTTGGTTCAGGAGGCTTTGAACAACCACGA
JMFF027O14+ GGAGAAGAAGGCGTTGGATGAGTTTAAGGCGTTGGTTCAGGAGGCTTTGAACAACCACGA
JMFF023N14+ GGAGAAGAAGGCGTTGGATGAGTTTAAGGCGTTGGTTCAGGAGGCTTTGAACAACCACGA
JMFF036K13+ GGAGAAGAAGGCGTTGGATGAGTTTAAGGCGTTGGTTCANGAGGCTTTGAACAACCACGA
JMFF018K08+ GGAGAAGAAGGCGTTGGATGAGTTTAAGGCGTTGGTTCAGGAGGCTTTGAACAACCACGA
JMFF034F01+ GGAGAAGAAGGCGTTGGATGAGTTTAAGGCGTTGGTTCAGGAGGCTTTGAACAACCACGA
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consensus GGAGAAGAAGGCGTTGGATGAGTTTAAGGCGTTGGTTCAGGAGGCTTTGAACAACCACGA

. : . : . : . : . : . :
JMFF021O08+ CTTTACCGCTAAGCCTAAGGAGGAGGAGAAGAAACCCGCCGCCGCCGCCGCTCCGGTTGC
JMFF027O14+ CTTTACCGCTAAGCCTAAGGAGGAGGAGAAGAAACCCGCCGCCGCCGCCGCTCCGGTTGC
JMFF023N14+ CTTTACCGCTAAGCCTAAGGAGGAGGAGAAGAAACCCGCCGCCGCCGCCGCTCCGGTTGC
JMFF036K13+ CTTTACCGCTAAGCCTAAGGAGGAGGAGAAGAAACCCGCCGCCGCCGCCGCTCCGGTTGC
JMFF018K08+ CTTTACCGCTAAGCCTAAGGAGGAGGAGAAGAAACCCGCCGCCGCCGCCGCTCCGGTTGC
JMFF034F01+ CTTTACCGCTAAGCCTAAGGAGGAGGAGAAGAAACCCGCCGCCGCCGCCGCTCCGGTTGC
____________________________________________________________
consensus CTTTACCGCTAAGCCTAAGGAGGAGGAGAAGAAACCCGCCGCCGCCGCCGCTCCGGTTGC

. : . : . : . : . : . :
JMFF021O08+ GGAAGAGCAACCCAAGCCGGAGGAGGATAAGAAAGAATCCGAGGCTGCGCCGGAGCCGAC
JMFF027O14+ GGAAGAGCAACCCAAGCCGGAGGAGGATAAGAAAGAATCCGAGGCTGCGCCGGAGCCGAC
JMFF023N14+ GGAAGAGCAACCCAAGCCGGAGGAGGATAAGAAAGAATCCGAGGCTGCGCCGGAGCCGAC
JMFF036K13+ GGAAGAGCAACCCAAGCCGGAGGAGGATAAGAAAGAATCCGAGGCTGCGCCGGAGCCGAC
JMFF018K08+ GGAAGAGCAACCCAAGCCGGAGGAGGATAAGAAAGAATCCGAGGCTGCGCCGGAGCCGAC
JMFF034F01+ GGAAGAGCAACCCAAGCCGGAGGAGGATAAGAAAGAATCCGAGGCTGCGCCGGAGCCGAC
____________________________________________________________
consensus GGAAGAGCAACCCAAGCCGGAGGAGGATAAGAAAGAATCCGAGGCTGCGCCGGAGCCGAC

. : . : . : . : . : . :
JMFF021O08+ CAAGGAAGCGCCTGTGTCGG
JMFF027O14+ CAAGGAAGCGCCTGTGTCGGAAGAGAAGAAAGACGCGGAAGCGCCGCCCAAGGCGGAGGA
JMFF023N14+ CAAGGAAGCGCCTGTGTCGGAAGAGAAGAAAGACGCGGAAGCGCCGCCCAAGGCGGAGGA
JMFF036K13+ CAATGAAGCGCCTGTGTCNGAAGAGAANAAAGACGCGGAAGCGCCGCCCAA
JMFF018K08+ CAAGGAAGCGCCTGTGTCGGAAGAGAAGAAAGACGCGGAAGCGCCGCCCAAGGCGGAGGA
JMFF034F01+ CAAGGAAGCGCCTGTGTCGGAAGAGAAGAAAGACGCGGAAGCGCCGCCCAAGGCGGAGGA
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consensus CAAGGAAGCGCCTGTGTCGGAAGAGAAGAAAGACGCGGAAGCGCCGCCCAAGGCGGAGGA

. : . : . : . : . : . :
JMFF027O14+ GGAGAAAAAGG
JMFF023N14+ GGAGAAAAAGG
JMFF018K08+ GGAGAAAAAGGAGGAGGTGAAAGAAACAGAGAAAGAGATTCCACCGCCACCCACGGAGGC
JMFF034F01+ GGAGAAAAAGGAGGAGGTGAAAGAAACAGAGAAAGAGATTCCACCGCCACCCACGGAGGC
____________________________________________________________
consensus GGAGAAAAAGGAGGAGGTGAAAGAAACAGAGAAAGAGATTCCACCGCCACCCACGGAGGC

. : . : . : . : . : . :
JMFF018K08+ GCCGTCCGCCGAGCCTTCGGTGGTTGTCGAGAAA
JMFF034F01+ GCCGTCCGCCGAGCCTTCGGTGGTTGTCGAGAAACTCNAA
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consensus GCCGTCCGCCGAGCCTTCGGTGGTTGTCGAGAAACTCNAA