Alignment Contig 4445

                          .    :    .    :    .    :    .    :    .    :    .    :

JMFF002I17+ GGTTGCCTTGTTGGCCCAACTTCCGCATTTTCGGACAAATATATCCACGTGTCTCTCACA
JMFF013F11+ GGTTGCCTTGTTGGCCCAACTTCCGCATTTTCGGACAAATATATCCACGTGTCTCTCACA
____________________________________________________________
consensus GGTTGCCTTGTTGGCCCAACTTCCGCATTTTCGGACAAATATATCCACGTGTCTCTCACA

. : . : . : . : . : . :
JMFF002I17+ CATGGGAGTTGCGCTTCGTCAGTGGGTAGAGCGCAAATACAGTTCACTGGAAAGCAGGCG
JMFF013F11+ CATGGGAGTTGCGCTTCGTCAGTGGGTAGAGCGCAAATACAGTTCACTGGAAAGCAGGCG
JMSF001F10+ GCAAATACAGTTCACTGGAAAGCAGGCG
____________________________________________________________
consensus CATGGGAGTTGCGCTTCGTCAGTGGGTAGAGCGCAAATACAGTTCACTGGAAAGCAGGCG

. : . : . : . : . : . :
JMFF002I17+ CACCAATTTGCACTCCATTGCTGTAAATCTGAGCTCAGCTCGCCTCACCTCGGCTCTTCG
JMFF013F11+ CACCAATTTGCACTCCATTGCTGTAAATCTGAGCTCAGCTCGCCTCACCTCGGCTCTTCG
JMSF001F10+ CACCAATTTGCACTCCATTGCTGTAAATCTGAGCTCAGCTCGCCTCACCTCGGCTCTTCG
JMSF018F12+ GCACTCCATTGCTGTAAATCTGAGCTCAGCTCGCCTCACCTCGGCTCTTCG
____________________________________________________________
consensus CACCAATTTGCACTCCATTGCTGTAAATCTGAGCTCAGCTCGCCTCACCTCGGCTCTTCG

. : . : . : . : . : . :
JMFF002I17+ TCTCCTTGGTTCTTAGGATTCTTGCACTCCATCTGTTTGATAAAAGTCTATGGCGACTGG
JMFF013F11+ TCTCCTTGGTTCTTAGGATTCTTGCACTCCATCTGTTTGATAAAAGTCTATGGCGACTGG
JMSF001F10+ TCTCCTTGGTTCTTAGGATTCTTGCACTCCATCTGTTTGATAAAAGTCTATGGCGACTGG
JMSF018F12+ TCTCCTTGGTTCTTAGGATTCTTGCACTCCATCTGTTTGATAAAAGTCTATGGCGACTGG
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consensus TCTCCTTGGTTCTTAGGATTCTTGCACTCCATCTGTTTGATAAAAGTCTATGGCGACTGG

. : . : . : . : . : . :
JMFF002I17+ GTGCTGCGTTGCTGCTACTCACACTGACTGTGGGCTCGGCCGTTCTTGTATTGGTTTGCC
JMFF013F11+ GTGCTGCGTTGCTGCTACTCACACTGACTGTGGGCTCGGCCGTTCTTGTATTGGTTTGCC
JMSF001F10+ GTGCTGCGTTGCTGCTACTCACACTGACTGTGGGCTCGGCCGTTCTTGTATTGGTTTGCC
JMSF018F12+ GTGCTGCGTTGCTGCTACTCACACTGACTGTGGGCTCGGCCGTTCTTGTATTGGTTTGCC
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consensus GTGCTGCGTTGCTGCTACTCACACTGACTGTGGGCTCGGCCGTTCTTGTATTGGTTTGCC

. : . : . : . : . : . :
JMFF002I17+ CTCTATTTCTTCTAGGACTGCGGGTACTAGACATAGTCATGGCAGTTCCTTCAAGATGAA
JMFF013F11+ CTCTATTTCTTCTAGGACTGCGGGTACTAGACATAGTCATGGCAGTTCCTTCAAGATGAA
JMSF001F10+ CTCTATTTCTTCTAGGACTGCGGGTACTAGACATAGTCATGGCAGTTCCTTCAAGATGAA
JMSF018F12+ CTCTATTTCTTCTAGGACTGCGGGTACTAGACATAGTCATGGCAGTTCCTTCAAGATGAA
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consensus CTCTATTTCTTCTAGGACTGCGGGTACTAGACATAGTCATGGCAGTTCCTTCAAGATGAA

. : . : . : . : . : . :
JMFF002I17+ GCCCAGTGGAGGGTGTCGAATTCGG
JMFF013F11+ GCCCAGTGGAGGGTGTCGAATTCGG
JMSF001F10+ GCCCAGTGGAGGGTGTCGAATTCGGTGCCAGTCCACTAGTACGGATGAGCGCAAAACAAA
JMSF018F12+ GCCCAGTGGAGGGTGTCGAATTCGGTGCCAGTCCACTAGTACGGATGAGCGCAAAACAAA
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consensus GCCCAGTGGAGGGTGTCGAATTCGGTGCCAGTCCACTAGTACGGATGAGCGCAAAACAAA

. : . : . : . : . : . :
JMSF001F10+ AATGAATTTGTTAGACAATGCAAGCAATCTCCTCACTAATCTGTTGAGTGGGG
JMSF018F12+ AATGAATTTGTTAGACAATGCAAGCAATCTCCTCACTAATCTGTTGAGTGGGGGAAAAAT
____________________________________________________________
consensus AATGAATTTGTTAGACAATGCAAGCAATCTCCTCACTAATCTGTTGAGTGGGGGAAAAAT

. : . : . : . : . : . :
JMSF018F12+ TGGGTCCATGCCTACTGCTGAAGGTGCTGTTTCTGATCTTTTTGGTCGGCCACTTTTCTT
____________________________________________________________
consensus TGGGTCCATGCCTACTGCTGAAGGTGCTGTTTCTGATCTTTTTGGTCGGCCACTTTTCTT

. : . : . : . : . : . :
JMSF018F12+ CTCACTGTACGACTGGTTCTTAAAGTATGGCTCGGTGTATAAACTTGCTTTTGGGCCGAA
____________________________________________________________
consensus CTCACTGTACGACTGGTTCTTAAAGTATGGCTCGGTGTATAAACTTGCTTTTGGGCCGAA

. : . : . : . : . : . :
JMSF018F12+ AGCATTCGTAGTTGTATCAGATCCCATTGTGGCAAGGCATATTCTTCGTGAAAATGCATT
____________________________________________________________
consensus AGCATTCGTAGTTGTATCAGATCCCATTGTGGCAAGGCATATTCTTCGTGAAAATGCATT

. : . : . : . : . : . :
JMSF018F12+ CTCATATGA
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consensus CTCATATGA