Alignment Contig 4150

                          .    :    .    :    .    :    .    :    .    :    .    :

rJMFF048P15+ GTTTTTTTGGCAGATCATAAAAACCTTTACTTGCACAAACATAGATTATATGTTTACACA
rJMFF049P02+ AAACATAGATTATATGTTTACACA
rJMFF036F14+ GTTTACACA
rJMSF041G05+ CACA
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consensus GTTTTTTTGGCAGATCATAAAAACCTTTACTTGCACAAACATAGATTATATGTTTACACA

. : . : . : . : . : . :
rJMFF048P15+ CTACAAAACTACGTATTGCTTTAAACACAAACTAATAAGGGTACAACATAGAAGTTGATC
rJMFF049P02+ CTACAAAACT-CATTTTGCTTTAAACACAAACTAATAAGGGTACAACATAGAAGTTGATC
rJMFF036F14+ CTACAAAACT-CATTTTGCTTTAAACACAAACTAATAAGGGTACAACATAGAAGTTGATC
rJMFF017H13+ TTGCTTTAAACACAAACTAATAAGGGTACAACATAGAAGTTGATC
rJMSF041G05+ CTACAAAACT-CATTTTGCTTTAAACACAAACTAATAAGGGTACAACATAGAAGTTGATC
rJMSF041E18+ CTACAAAACT-CATTTTGCTTTAAACACAAACTAATAAGGGTACAACATAGAAGTTGATC
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consensus CTACAAAACT-CATTTTGCTTTAAACACAAACTAATAAGGGTACAACATAGAAGTTGATC

. : . : . : . : . : . :
rJMFF048P15+ CAAAACATGCAATATACTATCAGACATGTGTGCACACAGCTATATATACGATGACACGAG
rJMFF049P02+ CAAATAATGCAATATCATATCAGAGATGTGTGCACACAGCTATATATACGATGACACGAG
rJMFF036F14+ CAAATAATGCAATATCATATCAGAGATGTGTGCACACAGCTATATATACGATGACACGAG
rJMFF017H13+ CAAATAATGCAATATCATATCAGAGATGTGTGCACACAGCTATATATACGATGACACGAG
rJMSF041G05+ CAAATAATGCAATATCATATCAGAGATGTGTGCACACAGCTATATATACGATGACACGAG
rJMSF041E18+ CAAATAATGCAATATCATATCAGAGATGTGTGCACACAGCTATATATACGATGACACGAG
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consensus CAAATAATGCAATATCATATCAGAGATGTGTGCACACAGCTATATATACGATGACACGAG

. : . : . : . : . : . :
rJMFF048P15+ CGAGATAACGGTGGATTGCGTGTGAAGCCTACCTCAAGTGAAAGAGCCAACAACTGAAGA
rJMFF049P02+ CGAGATAACGGTGGATTGCGTGTGAAGCCTACCTCAAGTGAAAGAGCGAACAACTGAAGA
rJMFF036F14+ CGAGATAACGGTGGATTGCGTGTGAAGCCTACCTCAAGTGAAAGAGCGAACAACTGAAGA
rJMFF017H13+ CGAGATAACGGTGGATTGCGTGTGAAGCCTACCTCAAGTGAAAGAGCGAACAACTGAAGA
rJMSF041G05+ CGAGATAACGGTGGACTGCGTGTGAAGCCTACCTCAAGTGAAAGAGCGAACAACTGAAGA
rJMSF041E18+ CGAGATAACGGTGGATTGCGTGTGAAGCCTACCTCAAGTGAAAGAGCGAACAACTGAAGA
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consensus CGAGATAACGGTGGATTGCGTGTGAAGCCTACCTCAAGTGAAAGAGCGAACAACTGAAGA

. : . : . : . : . : . :
rJMFF048P15+ GGTCGTAACCAAACCTGAAAGAAGGCCGACGATGATTGCACTGTTGTAGGCCGTGGGCTC
rJMFF049P02+ GGTCGTAACCAAACCTGAAAGAAGGCCGACGATGATTGCACTGTTGTAGGTCGTGGGCTC
rJMFF036F14+ GGTCGTAACCAAACCTGAAAGAAGGCCGACGATGATTGCACTGTTGTAGGTCGTGGGCTC
rJMFF017H13+ GGTCGTAACCAAACCTGAAAGAAGGCCGACGATGATTGCACTGTTGTAGGTCGTGGGCTC
rJMSF041G05+ GGTCGTAACCAAACCTGAAAGAAGGCCGACGATGATTGCACTGTTGTAGGTCGTGGGCTC
rJMSF041E18+ GGTCGTAACCAAACCTGAAAGAAGGCCGACGATGATTGCACTGTTGTAGGTCGTGGGCTC
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consensus GGTCGTAACCAAACCTGAAAGAAGGCCGACGATGATTGCACTGTTGTAGGTCGTGGGCTC

. : . : . : . : . : . :
rJMFF048P15+ CGCTTGCATCGAG
rJMFF049P02+ CGCTTGCATCGAGTTGTTCCTCGAATCAATATACGTCTCGTTTAGAAATGGTCCACCGAC
rJMFF036F14+ CGCTTGCATCGAGTTGTTCCTCGAATCAATATACGTCTCGTTTAGAAATGGTCCACCGAC
rJMFF017H13+ CGCTTGCATCGAGTTGTTCCTCGAATCAATATACGTCTCGTTTAGAAATGGTCCACCGAC
rJMSF041G05+ CGCTTGCATCGAGTTGTTCCTCGAATCAATATACGTCTCGTTTAGAAATGGTCCACCGAC
rJMSF041E18+ CGCTTGCATCGAGTTGTTCCTCGAATCAATATACGTCTCGTTTAGAAATGGTCCACCGAC
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consensus CGCTTGCATCGAGTTGTTCCTCGAATCAATATACGTCTCGTTTAGAAATGGTCCACCGAC

. : . : . : . : . : . :
rJMFF049P02+ GAGTCCCCCAACCGCAACGTTGGGGTTAGGTTGGGTGGATTCGAGCCACTTGAAGCCATC
rJMFF036F14+ GAGTCCCCCAACCGCAACGTTGGGGTTAGGTTGGGTGGATTCGAGCCACTTGAAGCCATC
rJMFF017H13+ GAGTCCCCCAACCGCAAGGTTGGGGTTAGGTTGGGTGGATTCGAGCCACTTGAAGCCATC
rJMSF041G05+ GAGTCCCCCAACCGCAACGTTGGGGTTAGGTTGGGTGGATTCGAGCCACTTGAAGCCATC
rJMSF041E18+ GAGTCCCCCAACCGCAACGTTGGGGTTAGGTTGGGTGGATTCGAGCCACTTGAAGCCATC
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consensus GAGTCCCCCAACCGCAACGTTGGGGTTAGGTTGGGTGGATTCGAGCCACTTGAAGCCATC

. : . : . : . : . : . :
rJMFF049P02+ TTTGCACCCGGTTGTTGCATCGGTGGGTATCGAGGCTCCTCGATGGTGAACGTATTTCGG
rJMFF036F14+ TTTGCACCCGGTTGTTGCATCGGTGGGTATCGAGGCTCCTCGATGGTGAACGTATTTCGG
rJMFF017H13+ TTTGCACCCGGTTGTTGCATCGGTGGGTATCGAGGCTCCTCGATGGTGAACGTATTTCGG
rJMSF041G05+ TTTGCACCCGGTTGTTGCATCGGTGGGTATCGAGGCTCCTCGATGGTGAACGTATTTCGG
rJMSF041E18+ TTTGCACCCGGTTGTTGCATCGGTGGGTATCGAGGCTCCTCGATGGTGAACGTATTTCGG
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consensus TTTGCACCCGGTTGTTGCATCGGTGGGTATCGAGGCTCCTCGATGGTGAACGTATTTCGG

. : . : . : . : . : . :
rJMFF049P02+ GTAGTTGTCCCCATACCCAACGAGATAACTCATCTTCATTGGATTGTCACCCAAAACATA
rJMFF036F14+ GTAGTTGTCCCCATACCCAACGAGATAACTCATCTTCATTGGATTGTCACCCAAAACATA
rJMFF017H13+ GTAGTTGTCCCCATACCCAACGAGATAACTCATCTTCATTGGATTGTCACCCAAAACATA
rJMSF041G05+ GTAGTTGTCCCCATACCCAACGAGATAACTCATCTTCATTGGATTGTCACCCAAAACATA
rJMSF041E18+ GTAGTTGTCCCCATACCCAACGAGATAACTCATCTTCATTGGATTGTCACCCAAAACATA
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consensus GTAGTTGTCCCCATACCCAACGAGATAACTCATCTTCATTGGATTGTCACCCAAAACATA

. : . : . : . : . : . :
rJMFF049P02+ ATCAGCCTGTGACATGGCAAACTTCCGCAGATCAGACGGGGTATAATATTTCCCATCGCA
rJMFF036F14+ ATCAGCCTGTGACATGGCAAACTTCCGCAGATCAGACGGGGTATAATATTTCCCATCGCA
rJMFF017H13+ ATCAGCCTGTGACATGGCAAACTTCCGCAGATCAGACGGGGTATAATATTTCCCAGCGCA
rJMSF041G05+ ATCAGCCTGTGACATGGCAAACTTCCGCAGATCAGACGGGGTATAATATTTCCCATCGCA
rJMSF041E18+ ATCAGCCTGTGACATGGCAAACTTCCGCAGATCAGACGGGGTATAATATTTCCCATCGCA
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consensus ATCAGCCTGTGACATGGCAAACTTCCGCAGATCAGACGGGGTATAATATTTCCCATCGCA

. : . : . : . : . : . :
rJMFF049P02+ CGTTATCTTTGCAG
rJMFF036F14+ CGTTATCTTTGCAGTGCGAGACGAAAGCATGTAATCGCTGTAGACTACAGCTAAGAAGGC
rJMFF017H13+ CGTTATCTTTGCAGTGCGAGACGAAAGCATGTAATCGCTGTAGACTACAGCTAAGAAGGC
rJMSF041G05+ CGTTATCTTTGCAGTGCGAGACGAAAGCATGTAATCGCTGTAGACTACAGCTAAGAAGGC
rJMSF041E18+ CGTTATCTTTGCAGTGCGAGACGAAAGCATGTAATCGCTGTAGACTACAGCTAAGAANGC
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consensus CGTTATCTTTGCAGTGCGAGACGAAAGCATGTAATCGCTGTAGACTACAGCTAAGAAGGC

. : . : . : . : . : . :
rJMFF036F14+ CGAGGCTACCGGATGCTGCAAAGCGTTCCATTGGCTTATCCATACTAAA-CCCGAATCGG
rJMFF017H13+ CGAGGCTACCGGATGCTGCAAAGCGTTCCATTGGCTTATCCATACTAAA-CCCGAATCGG
rJMSF041G05+ CGAGGCTACCGGATGCTGCAAAGCGTTCCATTGGCTTATCCATACTAAAACCCGAATCGG
rJMSF041E18+ CGAGGCTACCGGATGCTGCAAAGCGTTCCATTGGCTTATCCATACTAAA-CCCGAATCGG
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consensus CGAGGCTACCGGATGCTGCAAAGCGTTCCATTGGCTTATCCATACTAAA-CCCGAATCGG

. : . : . : . : . : . :
rJMFF036F14+ TTCTGCTGGAAGTGGCTGTA
rJMFF017H13+ TTCTGCTGGAAGTGGCTGTA
rJMSF041G05+ TTCTGCTGAAAGTGGCTGTA
rJMSF041E18+ TTCTGCTGGAAGTGGCTGTAGGAGATTTCGGTAAGAGCCCACACATAACTGCNTTCTGCA
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consensus TTCTGCTGGAAGTGGCTGTAGGAGATTTCGGTAAGAGCCCACACATAACTGCNTTCTGCA

. : . : . : . : . : . :
rJMSF041E18+ GTGCTCCTATACTTCAA
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consensus GTGCTCCTATACTTCAA