Alignment Contig 4023

                          .    :    .    :    .    :    .    :    .    :    .    :

rJMFF023H11+ CCACCAGTAAATGAAACAACAAGTGATTTCAAGTTGGAAAATATAGCTACACATATTCAG
rJMFF018H12+ AAATATAGCTACACATATTCAG
rJMFF029D10+ AAATATAGCTACACATATTCAG
rJMSF038K06+ CATATTCAG
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consensus CCACCAGTAAATGAAACAACAAGTGATTTCAAGTTGGAAAATATAGCTACACATATTCAG

. : . : . : . : . : . :
rJMFF023H11+ CAATGACCTTACTACAATACACAGAAACAACAAATTAAAAGTGAGAAGGCAGGCAGATTG
rJMFF018H12+ CAATGACCTTACTACAATACACAGAAACAACAAATTAAAAGTGAGAAGGCAGGCAGATTG
rJMFF029D10+ CAATGACCTTACTACAATACACAGAAACAACAAATTAAAAGTGAGAAGGCAGGCAGATTG
rJMSF038K06+ CAATGACCTTACTACAATACACAGAAACAACAAATTAAAAGTGAGAAGGCAGGCAGATTG
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consensus CAATGACCTTACTACAATACACAGAAACAACAAATTAAAAGTGAGAAGGCAGGCAGATTG

. : . : . : . : . : . :
rJMFF023H11+ AAGCTGTATTTTAATGATCATAACACTGGTTACTCATATTTGGCCACTGATCATTAAAGT
rJMFF018H12+ AAGCTGTATTTTAATGATCATAACACTGGTTACTCATATT-GGCCACTGATCATTAAAGT
rJMFF029D10+ AAGCTGTATTTTAATGATCATAACACTGGTTACTCATATTTGGCCACTGATCATTAAAGT
rJMSF038K06+ AAGCTGTATTTTAATGATCATAACACTGGTTACTCATATTTGGCCACTGATCATTAAAGT
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consensus AAGCTGTATTTTAATGATCATAACACTGGTTACTCATATTTGGCCACTGATCATTAAAGT

. : . : . : . : . : . :
rJMFF023H11+ ACAGCTACAAAATAAACACGACCGCAACCATAAAGACTGCAAAACTGAACGAGGATTTTA
rJMFF018H12+ ACAGCTACAAAATAAACACGACCGCAACCATAAAGACTGCAAAACTGAACGAGGATTTTA
rJMFF029D10+ ACAGCTACAAAATAAACACGACCGCAACCATAAAGACTGCAAAACTGAACGAGGATTTTA
rJMSF038K06+ ACAGCTACAAAATAAACACGACCGCAACCATAAAGACTGCAAAACTGAACGAGGATTTTA
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consensus ACAGCTACAAAATAAACACGACCGCAACCATAAAGACTGCAAAACTGAACGAGGATTTTA

. : . : . : . : . : . :
rJMFF023H11+ CAAAACAAAACGCAGCACGAACGAACCTAATTCTTACCATCTTTGATGGCTTTATCATCT
rJMFF018H12+ CAAAACAAAACGCAGCACGAACGAACCTAATTCTTACCATCTTTGATGGCTTTATCATCT
rJMFF029D10+ CAAAACAAAACGCAGCACGCACGAACCTAATTCTTACCATCTTTGATGGCTTTATCATCT
rJMSF038K06+ CAAAACAAAACGCAGCACGAACGAACCTAATTCTTACCATCTTTGATGGCTTTATCATCT
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consensus CAAAACAAAACGCAGCACGAACGAACCTAATTCTTACCATCTTTGATGGCTTTATCATCT

. : . : . : . : . : . :
rJMFF023H11+ ACAACTACTTGGAACTTCTTGTACTCGTATTCTTTAGGCTCTGGAGTGAGCTCCTCGGGC
rJMFF018H12+ ACAACTACTTGGAACTTCTTGTACTCGTATTCTTTAGGCTCTGGAGTGAGCTCCTCGGGC
rJMFF029D10+ ACAACTACTTGGAACTTCTTGTACTCGTATTCTTTAGGCTCTGGAGTGAGCTCCTCGGGC
rJMSF038K06+ ACAACTACTTGGAACTTCTTGTACTCGTATTCTTTAGGCTCTGGAGTGAGCTCCTCGGGC
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consensus ACAACTACTTGGAACTTCTTGTACTCGTATTCTTTAGGCTCTGGAGTGAGCTCCTCGGGC

. : . : . : . : . : . :
rJMFF023H11+ ACAATAGGCCGCCTGTTTCTCAAGACGCTCCAAACGAACAACACCATGAGTGTCCCTAGC
rJMFF018H12+ ACAATAGGCCGCCTGTTTCTCAAGACGCTCCAAACGAACAACACCATGAGTGTCCCTAGC
rJMFF029D10+ ACAATAGGCCGCCTGTTTCTCAAGACGCTCCAAACGAACAACACCATGAGTGTCCCTAGC
rJMSF038K06+ ACAATAGGCCGCCTGTTTCTCAAGACGCTCCAAACGAACAACACCATGAGTGTCCCTAGC
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consensus ACAATAGGCCGCCTGTTTCTCAAGACGCTCCAAACGAACAACACCATGAGTGTCCCTAGC

. : . : . : . : . : . :
rJMFF023H11+ GCTCCACACCCGGTACCAAAGATCAAAGCGCCGAGGATTTTCAACCCACGTTCGTCGCTT
rJMFF018H12+ GCTCCACACCCGGTACCAAAGATCAAAGCGCCGAGGATTTTCAACCCACATTCGTCGCTT
rJMFF029D10+ GCTCCACACCCGGTACCAAAGATCAAAGCGCCGAGGATTTTCAACCCACATTCGTCGCTT
rJMSF038K06+ GCTCCACACCCGGTACCAAAGATCAAAGCGCCGAGGATTTTCAACCCACATTCGTCGCTT
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consensus GCTCCACACCCGGTACCAAAGATCAAAGCGCCGAGGATTTTCAACCCACATTCGTCGCTT

. : . : . : . : . : . :
rJMFF023H11+ CTCTTGGGAACACTCAGCTGCTCGGGTTTCCCCACACGAAAGGCCTTGGGATCCAACGGC
rJMFF018H12+ CTCTTGGGAACACTCAGCTGCTCGGGTTTCCCCACACGAAAGGCCTTGGGATCCAACGGC
rJMFF029D10+ CTCTTGGGAACACTCAGCTGCTCGGGTTTCCCCACACGAAAGGCCTTGGGATCCAACGGC
rJMSF038K06+ CTCTTGGGAACACTCAGCTGCTCGGGTTTCCCCACACGAAAGGCCTTGGGATCCAACGGC
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consensus CTCTTGGGAACACTCAGCTGCTCGGGTTTCCCCACACGAAAGGCCTTGGGATCCAACGGC

. : . : . : . : . : . :
rJMFF023H11+ TGAGAATGCATCCAATCTGGAGCAGCCCTTAACTTGAAACTCCATGAATATACATTACAC
rJMFF018H12+ TGAGAATGCATCCAATCTGGAGCAGCCCTTAACTTGAAACTCCATGAATATACATTACAC
rJMFF029D10+ TGAGAATGCATCCAATCTGGAGCAGCCCTTAACTTGAAACTCCATGAATATACATTACAC
rJMSF038K06+ TGAGAATGCATCCAATCTGGAGCAGCCCTTAACTTGAAACTCCATGAATATACATTACAC
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consensus TGAGAATGCATCCAATCTGGAGCAGCCCTTAACTTGAAACTCCATGAATATACATTACAC

. : . : . : . : . : . :
rJMFF023H11+ TTGTGGGATTGGTTCCACAATCTTGATGTGCTTAACCCAACAAACACCTCATCCTCTTTC
rJMFF018H12+ TTGTGGGATTGGTTCCACAATCTTGATGTGCTTAACCCAACAAACACCTCATCCTCTTTC
rJMFF029D10+ TTGTGGGATTGGTTCCACAATCTTGATGTGCTTAACCCAACAAACACCTCATCCTCTTTC
rJMSF038K06+ TTGTGGGATTGGTTCCACAATCTTGATGTGCTTAACCCAACAAACACCTCATCCTCTTTC
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consensus TTGTGGGATTGGTTCCACAATCTTGATGTGCTTAACCCAACAAACACCTCATCCTCTTTC

. : . : . : . : . : . :
rJMFF023H11+ CACATTTGGGATAAGTCAACAAAGCAAGAAAGCAGTGGATAACCTGGCCTAATCTCACC
rJMFF018H12+ CACATTTGGGATAAGTCAACAAAGCAAGAAAGCAGTGGATAACCTGGCCTAATCTCACCC
rJMFF029D10+ CACATTTGGGATAAGTCAACAAAGCAAGAAAGCAGTGGATAACCTGGCCTAATCTCACCC
rJMSF038K06+ CACATTTGGGATAAGTCAACAAAGCAAGAAAGCAGTGGATAACCTGGCCTAATCTCACCC
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consensus CACATTTGGGATAAGTCAACAAAGCAAGAAAGCAGTGGATAACCTGGCCTAATCTCACCC

. : . : . : . : . : . :
rJMFF018H12+ CATTTGCTCAACCTCACCTCCAATCTCTTTGAGCTTGCTTCATAATCAATCCAAGATTGC
rJMFF029D10+ CATTTGCTCAACCTCACCTCCNATCTCTTTGAGCTTGCTTCATAATCAATCCAAGATTGC
rJMSF038K06+ CATTTGCTCAACCTCACCTCCAATCTCTTTGAGCTTGCTTCATAATCAATCCAAGATTGC
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consensus CATTTGCTCAACCTCACCTCCAATCTCTTTGAGCTTGCTTCATAATCAATCCAAGATTGC

. : . : . : . : . : . :
rJMFF018H12+ AACTTTTCACCACTATTGAGCTCCAAATTGATGGATGAAACATTCC
rJMFF029D10+ AACTTTTCACCACTATTGAGCTCCCAATTGATGGAT
rJMSF038K06+ AACTTTTCACCACTATTGAGCTCCAAATTGATGGATGAAACATTCCCCACTTTAACAGAT
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consensus AACTTTTCACCACTATTGAGCTCCAAATTGATGGATGAAACATTCCCCACTTTAACAGAT

. : . : . : . : . : . :
rJMSF038K06+ ACCAAACTGCTCAAGTCAACCCCAACATGATTCCCATTAACATCCCCATATTTATCATCC
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consensus ACCAAACTGCTCAAGTCAACCCCAACATGATTCCCATTAACATCCCCATATTTATCATCC

. : . : . : . : . : . :
rJMSF038K06+ TTCAATATATCAAACTCAACCCCAAGAAACTTGTAATTCTCCTTCTCCCCAT
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consensus TTCAATATATCAAACTCAACCCCAAGAAACTTGTAATTCTCCTTCTCCCCAT