Alignment Contig 3892

                          .    :    .    :    .    :    .    :    .    :    .    :

JMSF049B10+ GTTCCATATTTTTCTAAACATGTCATAATATAAACTATGAGCCTATTTTGTTAAGGCAAG
JMSF018K17+ AAG
____________________________________________________________
consensus GTTCCATATTTTTCTAAACATGTCATAATATAAACTATGAGCCTATTTTGTTAAGGCAAG

. : . : . : . : . : . :
JMSF049B10+ TTTTTGAAATTCCATAAGTCATTCTATGATCAATATGTGCTTTCAGATAGTTATTCAGAT
JMSF018K17+ TTTTTGAAATTCCATAAGTCATTCTATGATCAATATGTGCTTTCAGATAGTTATTCAGAT
____________________________________________________________
consensus TTTTTGAAATTCCATAAGTCATTCTATGATCAATATGTGCTTTCAGATAGTTATTCAGAT

. : . : . : . : . : . :
JMSF049B10+ AAGTTATCCAGTTTATACTCTGTGCCATACTGAATATTTTAATTCTACTAGAAATTATCA
JMSF018K17+ AAGTTATCCAGTTTATACTCTGTGCCATACTGAATATTTTAATTCTACTAGAAATTATCA
____________________________________________________________
consensus AAGTTATCCAGTTTATACTCTGTGCCATACTGAATATTTTAATTCTACTAGAAATTATCA

. : . : . : . : . : . :
JMSF049B10+ TGAAGTGATTATGTTATGAGTTATGACATCTTTTTTATATTACTAAGCTTTATATCTGTG
JMSF018K17+ TGAAGTGATTATGTTATGAGTTATGACATCTTTTTTATATTACTAAGCTTTATATCTGTG
____________________________________________________________
consensus TGAAGTGATTATGTTATGAGTTATGACATCTTTTTTATATTACTAAGCTTTATATCTGTG

. : . : . : . : . : . :
JMSF049B10+ CTATTTACCTGTAAAATGATGCCAAATTGCCAATATCATCCAATGTTGAATGTATTCTGT
JMSF018K17+ CTATTTACCTGTAAAATGATGCCAAATTGCCAATATCATCCAATGTTGAATGTATTCTGT
____________________________________________________________
consensus CTATTTACCTGTAAAATGATGCCAAATTGCCAATATCATCCAATGTTGAATGTATTCTGT

. : . : . : . : . : . :
JMSF049B10+ CATAGAAAGTTTCATGATGAGTGTTACAAGTGATGAACTCTAAAGAGATTGGATATGTAA
JMSF018K17+ CATAGAAAGTTTCATGATGAGTGTTACAAGTGATGAACTCTAAAGAGATTGGATATGTAA
____________________________________________________________
consensus CATAGAAAGTTTCATGATGAGTGTTACAAGTGATGAACTCTAAAGAGATTGGATATGTAA

. : . : . : . : . : . :
JMSF049B10+ CATTGATTTTGCTTTTGCATTTGACAAATTGACTGCGCTCTTGAGGTATTTGTGGGGTTG
JMSF018K17+ CATTGATTTTGCTTTTGCATTTGACAAATTGACTGCGCTCTTGAGGTATTTGTGGGGTTG
____________________________________________________________
consensus CATTGATTTTGCTTTTGCATTTGACAAATTGACTGCGCTCTTGAGGTATTTGTGGGGTTG

. : . : . : . : . : . :
JMSF049B10+ AGGGGTTAAAGATGTAGGAATTTGAGGGATCAAATTTAATCTCAGTTCCAAACTTTGTAT
JMSF018K17+ AGGGGTTAAAGATGTAGGAATTTGAGGGATCAAATTTAATCTCAGTTCCAAACTTTGTAT
____________________________________________________________
consensus AGGGGTTAAAGATGTAGGAATTTGAGGGATCAAATTTAATCTCAGTTCCAAACTTTGTAT

. : . : . : . : . : . :
JMSF049B10+ TGAGCAGGAGTTCCACAAAAGCAGAATGACGAGATCATCTATGATGCCTACTTCGGCTTA
JMSF018K17+ TGAGCAGGAGTTCCACAAAAGCAGAATGACGAGATCATCTATGATGCCTACTTCGGCTTA
JMSF024K20+ AGGAGTTCCACAAAAGCAGAATGACGAGATCATCTATGATGCCTACTTCGGCTTA
JMFF018G02+ AGGAGTTCCACAAAAGCAGAATGACGAGATCATCTATGATGCCTACTTCGGCTTA
JMFF044H10+ AGGAGTTCCACAAAAGCAGAATGACGAGATCATCTATGATGCCTACTTCGGCTTA
____________________________________________________________
consensus TGAGCAGGAGTTCCACAAAAGCAGAATGACGAGATCATCTATGATGCCTACTTCGGCTTA

. : . : . : . : . : . :
JMSF049B10+ CATTCCCCCCGAAGATTCTTCATTTAATCAAGATGTTATTGATGCTGTTGAGAAGAGTAT
JMSF018K17+ CATTCCCCCCGAAGATTCTTCATTTAATCAAGATGTTATTGATGCTGTTGAGAAGAGTAT
JMSF024K20+ CATTCCCCCCGAAGATTCTTCATTTAATCAAGATGTTATTGATGCTGTTGAGAAGAGTAT
JMFF018G02+ CATTCCCCCCGAAGATTCTTCATTTAATCAAGATGTTATTGATGCTGTTGAGAAGAGTAT
JMFF044H10+ CATTCCCCCCGAAGATTCTTCATTTAATCAAGATGTTATTGATGCTGTTGAGAAGAGTAT
____________________________________________________________
consensus CATTCCCCCCGAAGATTCTTCATTTAATCAAGATGTTATTGATGCTGTTGAGAAGAGTAT

. : . : . : . : . : . :
JMSF049B10+ GAAGAAGTATGCGGACAATCTCATGCGTTTCCTCGAGGGGCTTAGTTCACGCCTATCTCA
JMSF018K17+ GAAGAAGTATGCGGACNATCTCATGCGTT
JMSF024K20+ GAAGAAGTATGCGGACAATCTCATGCGTTTCCTCGAGGGGCTTAGTTCACGCCTATCTCA
JMFF018G02+ GAAGAAGTATGCGGACAATCTCATGCGTTTCCTCGAGGGGCTTAGTTCACGCCTATCTCA
JMFF044H10+ GAAGAAGTATGCGGACAATCTCATGCGTTTCCTCGAGGGGCTTAGTTCACGCCTATCTCA
JMSF038L23+ GCTTAGTTCACGCCTATCTCA
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consensus GAAGAAGTATGCGGACAATCTCATGCGTTTCCTCGAGGGGCTTAGTTCACGCCTATCTCA

. : . : . : . : . : . :
JMSF049B10+ GTTGGAATTATATTGTTACAATCTTGATAAATCCATTGG
JMSF024K20+ GTTGGAATTATATTGTTACAATCTTGATAAATCCATTGGAGAAATGCGTTCTGATTTGGT
JMFF018G02+ GTTGGAATTATATTGTTACAATCTTGATAAATCCATTGGAGAAATGCGTTCTGATTTGGT
JMFF044H10+ GTTGGAATTATATTGTTACAATCTTGATAAATCCATTGGAGAAATGCGTTCTGATTTGGT
JMSF038L23+ GTTGGAATTATATTGTTACAATCTTGATAAATCCATTGGAGAAATGCGTTCTGATTTGGT
____________________________________________________________
consensus GTTGGAATTATATTGTTACAATCTTGATAAATCCATTGGAGAAATGCGTTCTGATTTGGT

. : . : . : . : . : . :
JMSF024K20+ TCATGATCATGGAGAAACAGATTCCAAACTCAAATCTCTTGAGAAACATCTCCAGGAGGT
JMFF018G02+ TCATGATCATGGAGAAACAGATTCCAAACTCAAATCTCTTGAGAAACATCTCCAG
JMFF044H10+ TCATGATCATGGAGAAACAGATTCCAAACTCAAATCTCTTGAGAAACATCTCCAGGAGGT
JMSF038L23+ TCATGATCATGGAGAAACAGATTCCAAACTCAAATCTCTTGAGAAACATCTCCAGGAGGT
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consensus TCATGATCATGGAGAAACAGATTCCAAACTCAAATCTCTTGAGAAACATCTCCAGGAGGT

. : . : . : . : . : . :
JMSF024K20+ CCACAGGTCTGTACAAATCCTGAGAGATAAGCAAGAACTTGCTGATGCCCAGAAGGAACT
JMFF044H10+ CCACAGGTCTGTACAAATCCTGAGAGATAAGCAAGAACTTGCTGATGCCCAGAAGGAACT
JMSF038L23+ CCACAGGTCTGTACAAATCCTGAGAGATAAGCAAGAACTTGCTGATGCCCAGAAGGAACT
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consensus CCACAGGTCTGTACAAATCCTGAGAGATAAGCAAGAACTTGCTGATGCCCAGAAGGAACT

. : . : . : . : . : . :
JMSF024K20+ GGCGAAGCTTCAGCTTGCACAAAAGGAATCGGGTTCAGCTAACAATTCTCAGCA
JMFF044H10+ GGCGAAGCTTCAGCTTGCACAANAGGAATCGGGTTCAGCTAACAATTCTCAGCA
JMSF038L23+ GGCGAAGCTTCAGCTTGCACAAAAGGAATCGGGTTCAGCTAACAATTCTCAGCAGAATGA
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consensus GGCGAAGCTTCAGCTTGCACAAAAGGAATCGGGTTCAGCTAACAATTCTCAGCAGAATGA

. : . : . : . : . : . :
JMSF038L23+ GGAGAGAGCGTCTCAACCTGCTTCCGATACCAAAAGGAGTGATAGCCCTTGTGAATTGCA
____________________________________________________________
consensus GGAGAGAGCGTCTCAACCTGCTTCCGATACCAAAAGGAGTGATAGCCCTTGTGAATTGCA

. : . : . : . : . : . :
JMSF038L23+ CGGGCAGCAACTGGCACTTGCATTGCCGCACCAAGTAGCACCACCGCAAACTTCACATAC
____________________________________________________________
consensus CGGGCAGCAACTGGCACTTGCATTGCCGCACCAAGTAGCACCACCGCAAACTTCACATAC

. : . : . : . : . : . :
JMSF038L23+ TACCAGACATATGGAGCAGCCACAACAGCCATCCGTCCCGCCAATTCCATCCCAAGTTAT
____________________________________________________________
consensus TACCAGACATATGGAGCAGCCACAACAGCCATCCGTCCCGCCAATTCCATCCCAAGTTAT

. : . : . : . : . : . :
JMSF038L23+ TACGCAATCACAGGGATACTATCTGTCACCGACCCAGATGCCGCTGTCTCAAGGTCAATA
____________________________________________________________
consensus TACGCAATCACAGGGATACTATCTGTCACCGACCCAGATGCCGCTGTCTCAAGGTCAATA

. : . : . : . : . : . :
JMSF038L23+ CATGCCATCTGAGTCTCAGTACCGGACTCCCCAAATGCAAGAAGTTGCTAGGCTGCCACC
____________________________________________________________
consensus CATGCCATCTGAGTCTCAGTACCGGACTCCCCAAATGCAAGAAGTTGCTAGGCTGCCACC

. : . : . : . : . : . :
JMSF038L23+ ACAACCTGCACAAGCTCAACTAAATCAGACCACGCCGGTTCAACCGGGACTTCCATATCA
____________________________________________________________
consensus ACAACCTGCACAAGCTCAACTAAATCAGACCACGCCGGTTCAACCGGGACTTCCATATCA

. : . : . : . : . : . :
JMSF038L23+ GCAGCCGTGGTTGCCGCAGTTACCTCAGCAGACCCAACAACCACAGCCACAACAACCATC
____________________________________________________________
consensus GCAGCCGTGGTTGCCGCAGTTACCTCAGCAGACCCAACAACCACAGCCACAACAACCATC

. : . : . : . : . : . :
JMSF038L23+ TATGCAACCACAGGCTAGACCATCATCATCTGCTGTTT
____________________________________________________________
consensus TATGCAACCACAGGCTAGACCATCATCATCTGCTGTTT