Alignment Contig 3794

                          .    :    .    :    .    :    .    :    .    :    .    :

JMSF037B19+ GGCGACGTCGGAGGTCCATCGCCGCTCAGTCAACCGTCGTCCAGTTCGTCGCCCATCTGC
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consensus GGCGACGTCGGAGGTCCATCGCCGCTCAGTCAACCGTCGTCCAGTTCGTCGCCCATCTGC

. : . : . : . : . : . :
JMSF037B19+ TCCCGTCGGCCATCGGTGTCGAAGTCTCATCGTCTGCGTCGTCGCAGTGTACTGACTTCT
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consensus TCCCGTCGGCCATCGGTGTCGAAGTCTCATCGTCTGCGTCGTCGCAGTGTACTGACTTCT

. : . : . : . : . : . :
JMSF037B19+ AGTTCTAGTACAATGGCCACGGGCTTCTCTTTTTCCAACTCTTCATCATCTTCCTCACCT
JMSF003N08+ TACAATGGCCACGGGCTTCTCTTTTTCCAACTCTTCATCATCTTCCTCACCT
JMSF019G19+ TACAATGGCCACGGGCTTCTCTTTTTCCAACTCTTCATCATCTTCCTCACCT
JMSF039C08+ TACAATGGCCACGGGCTTCTCTTTTTCCAACTCTTCATCATCTTCCTCACCT
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consensus AGTTCTAGTACAATGGCCACGGGCTTCTCTTTTTCCAACTCTTCATCATCTTCCTCACCT

. : . : . : . : . : . :
JMSF037B19+ TTCTCCTTCACCTCAACCCCTAGTGCCGCTGCCACCACCTCATCCTCGTCCCCATTTGGG
JMSF003N08+ TTCTCCTT
JMSF019G19+ TTCTCCTTCACCTCAACCCCTAGTG
JMSF039C08+ TTCTCCTTCACCTCAACCCCTAGTGCCGCTGCCACCACCTCATCCTCGTCCCCATTTGGG
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consensus TTCTCCTTCACCTCAACCCCTAGTGCCGCTGCCACCACCTCATCCTCGTCCCCATTTGGG

. : . : . : . : . : . :
JMSF037B19+ TTTTCTATGTCAAACCCTAGCTTCAGTACTTCATCCACCAGTTTCGGATTTGGCACTGCC
JMSF039C08+ TTTTCTATGTCAAACCCTAGCTTCAGTACTTCATCCACCAGTTTCGGATTTGGCACTGCC
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consensus TTTTCTATGTCAAACCCTAGCTTCAGTACTTCATCCACCAGTTTCGGATTTGGCACTGCC

. : . : . : . : . : . :
JMSF037B19+ TCTTCTGCTGCCACAACTTCATCTGTTACTACTGCTACTACTTCGCCATTTGGACCTAGT
JMSF039C08+ TCTTCTGCTGCCACAACTTCATCTGTTACTACTGCTACTACTTCGCCATTTGGACCTAGT
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consensus TCTTCTGCTGCCACAACTTCATCTGTTACTACTGCTACTACTTCGCCATTTGGACCTAGT

. : . : . : . : . : . :
JMSF037B19+ GTGGGTATCACTCCATCCATATTTGGAGCTAATTCCAGTTCCGGAGCATCAACAAATTTA
JMSF039C08+ GTGGGTATCACTCCATCCATATTTGGAGCTAATTCCAGTTCCGGAGCATCAACAAATTTA
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consensus GTGGGTATCACTCCATCCATATTTGGAGCTAATTCCAGTTCCGGAGCATCAACAAATTTA

. : . : . : . : . : . :
JMSF037B19+ TTTGGATCTGGCGCTTTTGGTTCATCTGCCACCGCAGCTTCATCTGCTACTACAGGTTCT
JMSF039C08+ TTTGGATCTGGCGCTTTTGGTTCATCTGCCACCGCAGCTTCATCTGCTACTACAGGTTCT
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consensus TTTGGATCTGGCGCTTTTGGTTCATCTGCCACCGCAGCTTCATCTGCTACTACAGGTTCT

. : . : . : . : . : . :
JMSF037B19+ ACTTCACCATTTGGATCTGGCGTGTTTACCACTTCCAATGCATTTGGAGCTTCTTTGGGT
JMSF039C08+ ACTTCACCATTTGGATCTGGCGTGTTTACCACTTCCAATGCATTTGGAGCTTCTTTGGGT
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consensus ACTTCACCATTTGGATCTGGCGTGTTTACCACTTCCAATGCATTTGGAGCTTCTTTGGGT

. : . : . : . : . : . :
JMSF037B19+ TCTGGATCTTCAACAAATTTATTTGGATCTGCTTCTTCCCTCCCGACCACAACCTCCGTT
JMSF039C08+ TCTGGATCTTCAACAAATTTATTTGGATCTGCTTCTTCCCTCCCGACCACAACCTCCGTT
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consensus TCTGGATCTTCAACAAATTTATTTGGATCTGCTTCTTCCCTCCCGACCACAACCTCCGTT

. : . : . : . : . : . :
JMSF037B19+ AGTTCCCCAATGTTTGGAGCAACTTCTTTTGGAGCTTCTACACCTTTTGGGTCTTCCTTG
JMSF039C08+ AGTTCCCCAATGTTTGGAGCAACTTCTTTTGGAGCTTCTACACCTTTTGGGTCT
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consensus AGTTCCCCAATGTTTGGAGCAACTTCTTTTGGAGCTTCTACACCTTTTGGGTCTTCCTTG

. : . : . : . : . : . :
JMSF037B19+ GGCTCTGGATCCTCTGGATCTTCATCTAATTCAGGTACAGTGNCCTCTACTGTATCACTG
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consensus GGCTCTGGATCCTCTGGATCTTCATCTAATTCAGGTACAGTGNCCTCTACTGTATCACTG

. : . : . : . : . : . :
JMSF037B19+ T
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consensus T