Alignment Contig 3569

                          .    :    .    :    .    :    .    :    .    :    .    :

JMSF009H05+ GGGGACTCCCGGTGCAGCTGGGTATTCTACTATTCTGCAGTCATCCGCCATCACTCTCCC
JMFF025A21+ GGTGCAGCTGGGTATTCTACTATTCTGCAGTCATCCGCCATCACTCTCCC
JMSF007O14+ GGTGCAGCTGGGTATTCTACTATTCTGCAGTCATCCGCCATCACTCTCCC
JMSF046B04+ GGTGCAGCTGGGTATTCTACTATTCTGCAGTCATCCGCCATCACTCTCCC
____________________________________________________________
consensus GGGGACTCCCGGTGCAGCTGGGTATTCTACTATTCTGCAGTCATCCGCCATCACTCTCCC

. : . : . : . : . : . :
JMSF009H05+ AAACGAAACAAACAGCGAAGGAATTAGGAAGAGATCGAATGGAACGATCGGCGAGGTTTC
JMFF025A21+ AAACGAAACAAACAGCGAAGGAATTAGGAAGAGATCGAATGGAACGATCGGCGAGGTTTC
JMSF007O14+ AAACGAAACAAACAGCGAAGGAATTAGGAAGAGATCGAATGGAACGATCGGCGAGGTTTC
JMSF046B04+ AAACGAAACAAACAGCGAAGGAATTAGGAAGAGATCGAATGGAACGATCGGCGAGGTTTC
JMSF004N19+ AAACGAAACAAACAGCGAAGGAATTAGGAAGAGATCGAATGGAACGATCGGCGAGGTTTC
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consensus AAACGAAACAAACAGCGAAGGAATTAGGAAGAGATCGAATGGAACGATCGGCGAGGTTTC

. : . : . : . : . : . :
JMSF009H05+ TACCATTGCCACTGTTGTTAGTTACACTGATCACAACTGTTAATGCTCTATATGGCCCCT
JMFF025A21+ TACCATTGCCACTGTTGTTAGTTACACTGATCACAACTGTTAATGCTCTATATGGCCCCT
JMSF007O14+ TACCATTGCCACTGTTGTTAGTTACACTGATCACAACTGTTAATGCTCTATATGGCCCCT
JMSF046B04+ TACCATTGCCACTGTTGTTAGTTACACTGATCACAACTGTTAATGCTCTATATGGCCCCT
JMSF004N19+ TACCATTGCCACTGTTGTTAGTTACACTGATCACAACTGTTAATGCTCTATATGGCCCCT
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consensus TACCATTGCCACTGTTGTTAGTTACACTGATCACAACTGTTAATGCTCTATATGGCCCCT

. : . : . : . : . : . :
JMSF009H05+ CCACTCCCGTTCTTCAGTTAAATCCTTCTAATTTTAAGTCTAAGGTTCTGAATTCCAATG
JMFF025A21+ CCACTCCCGTTCTTCAGTTAAATCCTTCTAATTTTAAGTCTAAGGTTCTGAATTCCAATG
JMSF007O14+ CCACTCCCGTTCTTCAGTTAAATCCTTCTAATTTTAAGTCTA
JMSF046B04+ CCACTCCCGTTCTTCAGTTAAATCCTTCTAATTTTAAGTCTAAGGTTCTGAATTCCAATG
JMSF004N19+ CCACTCCCGTTCTTCAGTTAAATCCTTCTAATTTTAAGTCTAAGGTTCTGAATTCCAATG
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consensus CCACTCCCGTTCTTCAGTTAAATCCTTCTAATTTTAAGTCTAAGGTTCTGAATTCCAATG

. : . : . : . : . : . :
JMSF009H05+ GCGTAGTGTTGGTAGAGTTCTTTGCCCCGTGGTGTGGCCACTGTAAGGCGTTAACACCCA
JMFF025A21+ GCGTAGTGTTGGTAGAGTTCTTTGCCCCGTGGTGTGGCCACTGTAAGGCGTTAACACCCA
JMSF046B04+ GCGTAGTGTTGGTAGAGTTCTTTGCCCCGTGGTGTGGCCACTGTAAGGCGTTAACACCCA
JMSF004N19+ GCGTAGTGTTGGTAGAGTTCTTTGCCCCGTGGTGTGGCCACTGTAAGGCGTTAACACCCA
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consensus GCGTAGTGTTGGTAGAGTTCTTTGCCCCGTGGTGTGGCCACTGTAAGGCGTTAACACCCA

. : . : . : . : . : . :
JMSF009H05+ CGTATGAGAAGGTCGCTTCTGTCTTGAAAGGCGTCGCTACCGTCGCAGCACTAGATGCCG
JMFF025A21+ CGTATGAGAATGTCGCTTCTGTCTTGAAAGGCGTCGCTACCGTCGCAGCACTAGATGCCG
JMSF046B04+ CGTATGAGAAGGTCGCTTCTGTCTTGAAAGGCGTCGCTACCGTCGCAGCACTAGATGCCG
JMSF004N19+ CGTATGAGAAGGTCGCTTCTGTCTTGAAAGGCGTCGCTACCGTCGCAGCACTAGATGCCG
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consensus CGTATGAGAAGGTCGCTTCTGTCTTGAAAGGCGTCGCTACCGTCGCAGCACTAGATGCCG

. : . : . : . : . : . :
JMSF009H05+ ATGCTCACA
JMFF025A21+ ATGCTCACAGCTCCCTTGCTCAGGAATATGGCATTAAAGGCTTTCCTACCATTAAGGTTT
JMSF046B04+ ATGCTCACAGCTCCCTTGCTCAGGAATATGGCATTAAAGGCTTTCCTACCATTAAGGTTT
JMSF004N19+ ATGCTCACAGCTCCCTTGCTCAGGAATATGGCATTAAAGGCTTTC
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consensus ATGCTCACAGCTCCCTTGCTCAGGAATATGGCATTAAAGGCTTTCCTACCATTAAGGTTT

. : . : . : . : . : . :
JMFF025A21+ TTGTACCTGGAAAGCAGCCTGTGGATTATCAAGGCGCAAGGGAGGCTAAATCCATGGTTG
JMSF046B04+ TTGTACCTGGAAAGCAGCCTGTGGATTATCAAGGCGCAAGGGAGGCTAAATCCATGGTTG
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consensus TTGTACCTGGAAAGCAGCCTGTGGATTATCAAGGCGCAAGGGAGGCTAAATCCATGGTTG

. : . : . : . : . : . :
JMFF025A21+ ACTTCGTAAAGGCACAGATTAGGAATCTGTTGAAGGATCGGTTAGATGGAAAAGCAACCG
JMSF046B04+ ACTTCGTAAAGGCACAGATTAGGAATCTGTTGAAGGATCGGTTAGATGGAAAAGCAACCG
____________________________________________________________
consensus ACTTCGTAAAGGCACAGATTAGGAATCTGTTGAAGGATCGGTTAGATGGAAAAGCAACCG

. : . : . : . : . : . :
JMFF025A21+ GAGGGTCTTCTCAAAAGTCTGAACCTAGTGCTTCAGTTGAATTGAACTCAAGAAATTTTG
JMSF046B04+ GAGGGTCTTCTCAAAAGTCTGAACCTAGTGCTTCAGTTGAATTGAACTCAAGAAATTTTG
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consensus GAGGGTCTTCTCAAAAGTCTGAACCTAGTGCTTCAGTTGAATTGAACTCAAGAAATTTTG

. : . : . : . : . : . :
JMFF025A21+ ATGACTTGGTGGTTAAAAGCAAAGACCTCTGGGATTGTGGAGTTCTTTGCACCTTGGGGT
JMSF046B04+ ATGACTTGGTGGTTAAAAGCAAAGACCTCTGG-ATTGTGGAGTTCTTTGCACCTTGGTGT
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consensus ATGACTTGGTGGTTAAAAGCAAAGACCTCTGGGATTGTGGAGTTCTTTGCACCTTGGGGT

. : . : . : . : . : . :
JMFF025A21+ GGCCACTGCAAG
JMSF046B04+ GGCCACTGCAAG
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consensus GGCCACTGCAAG