Alignment Contig 2514

                          .    :    .    :    .    :    .    :    .    :    .    :

rJMFF006C18+ GCGGTCTTTTCTCTGAGCATCTTTCAGATCTCAAACAAATAACAATTAAACAATTAATCA
rJMFF029K18+ GCGGTCTTTTCTCTGAGCATCTTTCAGATCTCNAACAAATAACAATTAAACAATTAATCA
rJMSF013M23+ AGATCTCAAACAAATAACAATTAAACAATTAATCA
rJMSF038G01+ AGATCTCAAACAAATAACAATTAAACAATTAATCA
____________________________________________________________
consensus GCGGTCTTTTCTCTGAGCATCTTTCAGATCTCAAACAAATAACAATTAAACAATTAATCA

. : . : . : . : . : . :
rJMFF006C18+ AAATCAAAATCAAATTCAATGCCAACCCAAACCAGCCAAGAAACAGGCAGAAGACTCACC
rJMFF029K18+ AAATCANAATCAAATTCAATGCCAACCCAAACCAGCCAAGAAACAGGCAGAAGACTCACC
rJMSF013M23+ AAATCAAAATCAAATTCAATGCCAACCCAAACCAGCCAAGAAACAGGCAGAAGACTCACC
rJMSF038G01+ AAATCAAAATCAAATTCAATGCCAACCCAAACCAGCCAAGAAACAGGCAGAAGACTCACC
____________________________________________________________
consensus AAATCAAAATCAAATTCAATGCCAACCCAAACCAGCCAAGAAACAGGCAGAAGACTCACC

. : . : . : . : . : . :
rJMFF006C18+ ACCAGATTACGGATTAACTATACACCATCTTCTAGGCTACAGAATATGCTTCTGTTGAAG
rJMFF029K18+ ACCAGATTACGGATTAACTATACACCATCTTCTAGGCTACAGAATATGCTTCTGTTGAAG
rJMSF013M23+ ACCAGATTACGGATTAACTATACACCATCTTCTAGGCTACAGAATATGCTTCTGTTGAAG
rJMSF038G01+ ACCAGATTACGGATTAACTATACACCATCTTCTAGGCTACAGAATATGCTTCTGTTGAAG
____________________________________________________________
consensus ACCAGATTACGGATTAACTATACACCATCTTCTAGGCTACAGAATATGCTTCTGTTGAAG

. : . : . : . : . : . :
rJMFF006C18+ CTAATGGTAGTGGATAACCCATGACAAATTGGCTTAACTTCTAAAGCCGAAGGCTGACCA
rJMFF029K18+ CTAATGGTAGTGGATAACCCATGACAAATTGGCTTAACTTCTAAAGCCGAAGGCTGACCA
rJMSF013M23+ CTAATGGTAGTGGATAACCCATGACAAATTGGCTTAACTTCTAAAGCCGAAGGCTGACCA
rJMSF038G01+ CTAATGGTAGTGGATAACCCATGACAAATTGGCTTAACTTCTAAAGCCGAAGGCTGACCA
____________________________________________________________
consensus CTAATGGTAGTGGATAACCCATGACAAATTGGCTTAACTTCTAAAGCCGAAGGCTGACCA

. : . : . : . : . : . :
rJMFF006C18+ CTTCTTTGATGACTCTTTCTTTGTCCTCTTCGAATTTGGGTCGATGAGGTTTTCCAGTGA
rJMFF029K18+ CTTCTTTGATGACTCTTTCTTTGTCCTCTTCGAATTTGGGTCGATGAGGTTTTCCAGTGA
rJMSF013M23+ CTTCTTTGATGACTCTTTCTTTGTCCTCTTCGAATTTGGGTCGATGAGGTTTTCCAGTGA
rJMSF038G01+ CTTCTTTGATGACTCTTTCTTTGTCCTCTTCGAATTTGGGTCGATGAGGTTTTCCAGTGA
____________________________________________________________
consensus CTTCTTTGATGACTCTTTCTTTGTCCTCTTCGAATTTGGGTCGATGAGGTTTTCCAGTGA

. : . : . : . : . : . :
rJMFF006C18+ TTTTGCCTTTTTGTTTCTTGACTTGCCTGCTTCTTTTAGGAGCTCAGCCAGCCTTTTCTT
rJMFF029K18+ TTTTGCCTTTTTGTTTCTTGACTTGCCTGCTTCTTTTAGGAGCTCAGCCAGCCTTTTCTT
rJMSF013M23+ TTTTGCCTTTTTGTTTCTTGACTTGCCTGCTTCTTTTAGGAGCTCAGCCAGCCTTTTCTT
rJMSF038G01+ TTTTGCCTTTTTGTTTCTTGACTTGCCTGCTTCTTTTAGGAGCTCAGCCAGCCTTTTCTT
____________________________________________________________
consensus TTTTGCCTTTTTGTTTCTTGACTTGCCTGCTTCTTTTAGGAGCTCAGCCAGCCTTTTCTT

. : . : . : . : . : . :
rJMFF006C18+ CTCATCATCAAAGTCCGGATTTG-TGTTCCAAGCTTCTCCTCTCGCAATTTAAGAACGTA
rJMFF029K18+ CTCATCATCAAAGTCCGGATTTGCTGTTCCAAGCTTCTCCTCTCGCAATTTAAGAACGTA
rJMSF013M23+ CTCATCATCAAAGTCCGGATTTGCTGTTCCAAGCTTCTCCTCTCGCAATTTAAGAACGTA
rJMSF038G01+ CTCATCATCAAAGTCCGGATTTGCTGTTCCAAGCTTCTCCTCTCGCAATTTAAGAACGTA
____________________________________________________________
consensus CTCATCATCAAAGTCCGGATTTGCTGTTCCAAGCTTCTCCTCTCGCAATTTAAGAACGTA

. : . : . : . : . : . :
rJMFF006C18+ CTCCAAAATCTCAATTGCATCTTCAACTCTTCCCATTGCATCATAAGTTGCAGCGAGATT
rJMFF029K18+ CTCCAAAATCTCAATTGCATCTTCAACTCTTCCCATTGCATCATAAGTTGCAGCGAGATT
rJMSF013M23+ CTCCAAAATCTCAATTGCATCTTCAACTCTTCCCATTGCATCATAAGTTGCAGCGAGATT
rJMSF038G01+ CTCCAAAATCTCAATTGCATCTTCAACTCTTCCCATTGCATCATAAGTTGCAGCGAGATT
____________________________________________________________
consensus CTCCAAAATCTCAATTGCATCTTCAACTCTTCCCATTGCATCATAAGTTGCAGCGAGATT

. : . : . : . : . : . :
rJMFF006C18+ ACTGTATACACCAAGTGTATCTTGATGGCAAGGGCCACACTCATGTTCTAAGATTTCTCT
rJMFF029K18+ ACTGTATACACCAAGTGTATCTTGATGGCAAGGGCCACACTCATGTTCTAAGATTTCTCT
rJMSF013M23+ ACTGTATACACCAAGTGTATCTTGATGGCAAGGGCCACACTCATGTTCTAAGATTTCTCT
rJMSF038G01+ ACTGTATACACCAAGTGTATCTTGATGGCAAGGGCCACACTCATGTTCTAAGATTTCTCT
____________________________________________________________
consensus ACTGTATACACCAAGTGTATCTTGATGGCAAGGGCCACACTCATGTTCTAAGATTTCTCT

. : . : . : . : . : . :
rJMFF006C18+ TGCTTCTTCAAACAATTCAGCAGCCTCGTCTATTTTGAACAACTGTACGCATGACAACCC
rJMFF029K18+ TGCTTCTTCAAACAATTCAGCAGCCTCGTCTATTTTGAACAACTGTACGCATGACAACCC
rJMSF013M23+ TGCTTCTTCAAACAATTCAGCAGCCTCGTCTATTTTGAACAACTGTACGCATGACAACCC
rJMSF038G01+ TGCTTCTTCAAACAATTCAGCAGCCTCGTCTATTTTGAACAACTGTACGCATGACAACCC
____________________________________________________________
consensus TGCTTCTTCAAACAATTCAGCAGCCTCGTCTATTTTGAACAACTGTACGCATGACAACCC

. : . : . : . : . : . :
rJMFF006C18+ CATTTGGTTCAACACCACTCCAAAGAAAGCTGATTTCCTCTCTCCACTGGCTCTAAGTTT
rJMFF029K18+ CATTTGGTTCAACACCACTCCAAAGAAAGCTGATTTCCTCTCTCCACTGGCTCTAAGTTT
rJMSF013M23+ CATTTGGTTCAACACCACTCCAAAGAAAGCTGATTTCCTCTCTCCACTGGCTCTAAGTTT
rJMSF038G01+ CATTTGGTTCAACACCACTCCAAAGAAAGCTGATTTCCTCTCTCCACTGGCTCTAAGTTT
____________________________________________________________
consensus CATTTGGTTCAACACCACTCCAAAGAAAGCTGATTTCCTCTCTCCACTGGCTCTAAGTTT

. : . : . : . : . : . :
rJMFF006C18+ TGCCACGGCACTCTCAAAGGAGCTTCGTGCTTCATCATACCTTCCAACCATATAAAACAT
rJMFF029K18+ TGCCACGGCACTCTCAAAGGAGCTTCGTGCTTCATCATACCTTCCAACCATATAAAACAT
rJMSF013M23+ TGCCACGGCACTCTCAAAGGAGCTTCGTGCTTCATCATACCTTCCAACCATATAAAACAT
rJMSF038G01+ TGCCACGGCACTCTCAAAGGAGCTTCGTGCTTCATCATACCTTCCAACCATATAAAACAT
____________________________________________________________
consensus TGCCACGGCACTCTCAAAGGAGCTTCGTGCTTCATCATACCTTCCAACCATATAAAACAT

. : . : . : . : . : . :
rJMFF006C18+ GACACCCATCCGTGCCTCTATCCCAGCAATTGTGCTTTGCTGCCCTGGTTTATCCTC
rJMFF029K18+ GACACCCATCCGTGCCTCTATCC
rJMSF013M23+ GACACCCATCCGTGCCTCTATCCCAGCAATTGTGCTTTGCTGCCCTGGTTTATCCTC
rJMSF038G01+ GACACCCATCCGTGCCTCTATCCCAGCAATTGTGCTTTGCTGCCCTGGTTTATCCTCCAA
____________________________________________________________
consensus GACACCCATCCGTGCCTCTATCCCAGCAATTGTGCTTTGCTGCCCTGGTTTATCCTCCAA

. : . : . : . : . : . :
rJMSF038G01+ CAACTTCAGAGCCTTCACCAAGAGCTTTAGTGCTTCCTCGGGTTCATTAAACAATTCATA
____________________________________________________________
consensus CAACTTCAGAGCCTTCACCAAGAGCTTTAGTGCTTCCTCGGGTTCATTAAACAATTCATA

. : . : . : . : . : . :
rJMSF038G01+ TATGGCAGAAATTTCTGTCATTCCACTTGCAATCTCTTCTGAAGTTGTTCCAGGCACAG
____________________________________________________________
consensus TATGGCAGAAATTTCTGTCATTCCACTTGCAATCTCTTCTGAAGTTGTTCCAGGCACAG