Alignment Contig 2278

                          .    :    .    :    .    :    .    :    .    :    .    :

JMSF027H24+ GGATTTTGACGTCTAGCATTGGGACGGAGCCTCACACTCACTGCCTCTTTAGATACTTCC
JMSF014O14+ GACGTCTAGCATTGGGACGGAGCCTCACACTCACTGCCTCTTTAGATACTTCC
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consensus GGATTTTGACGTCTAGCATTGGGACGGAGCCTCACACTCACTGCCTCTTTAGATACTTCC

. : . : . : . : . : . :
JMSF027H24+ GCAGAGATAGTTTCTGCTCAAGATTTTTCATTTCTACACGGAATTGAGTTAAGTGTGGGT
JMSF014O14+ GCAGAGATAGTTTCTGCTCAAGATTTTTCATTTCTACACGGAATTGAGTTAAGTGTGGGT
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consensus GCAGAGATAGTTTCTGCTCAAGATTTTTCATTTCTACACGGAATTGAGTTAAGTGTGGGT

. : . : . : . : . : . :
JMSF027H24+ GTTCATGCCTGCTTTGATAATGGGAATCTCCAAGAAGTTGTTACCGATATTCTGGTTTCT
JMSF014O14+ GTTCATGCCTGCTTTGATAATGGGAATCTCCAAGAAGTTGTTACCGATATTCTGGTTTCT
JMFF014A24+ GTTCATGCCTGCTTTGATAATGGGAATCTCCAAGAAGTTGTTACCGATATTCTGGTTTCT
JMFF007A15+ GTTCATGCCTGCTTTGATAATGGGAATCTCCAAGAAGTTGTTACCGATATTCTGGTTTCT
JMFF031O02+ GTTCATGCCTGCTTTGATAATGGGAATCTCCAAGAAGTTGTTACCGATATTCTGGTTTCT
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consensus GTTCATGCCTGCTTTGATAATGGGAATCTCCAAGAAGTTGTTACCGATATTCTGGTTTCT

. : . : . : . : . : . :
JMSF027H24+ GCTTAGCCTTCAAGTGATAGCATCTCACAAGGAGCACCCTCTTGCCAGGATTGCAATTCA
JMSF014O14+ GCTTAGCCTTCAAGTGATAGCATCTCACAAGGAGCACCCTCTTGCCAGGATTGCAATTCA
JMFF014A24+ GCTTAGCCTTCAAGTGATAGCATCTCACAAGGAGCACCCTCTTGCCAGGATTGCAATTCA
JMFF007A15+ GCTTAGCCTTCAAGTGATAGCATCTCACAAGGAGCACCCTCTTGCCAGGATTGCAATTCA
JMFF031O02+ GCTTAGCCTTCAAGTGATAGCATCTCACAAGGAGCACCCTCTTGCCAGGATTGCAATTCA
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consensus GCTTAGCCTTCAAGTGATAGCATCTCACAAGGAGCACCCTCTTGCCAGGATTGCAATTCA

. : . : . : . : . : . :
JMSF027H24+ TAAGACGGTTCTTGCTTTTGACAAAGATGCATACATTAAAGCCACCCCTTCGGTTCTTGG
JMSF014O14+ TAAGACGGTTCTTGCTTTTGACAAAGATGCATACATTAAAGCCACCCCTTCGGTTCTTGG
JMFF014A24+ TAAGACGGTTCTTGCTTTTGACAAAGATGCATACATTAAAGCCACCCCTTCGGTTCTTGG
JMFF007A15+ TAAGACGGTTCTTGCTTTTGACAAAGATGCATACATTAAAGCCACCCCTTCGGTTCTTGG
JMFF031O02+ TAAGACGGTTCTTGCTTTTGACAAAGATGCATACATTAAAGCCACCCCTTCGGTTCTTGG
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consensus TAAGACGGTTCTTGCTTTTGACAAAGATGCATACATTAAAGCCACCCCTTCGGTTCTTGG

. : . : . : . : . : . :
JMSF027H24+ AGGCAACGGCCAAAACCAAGAATGGGTTACTCTAGAATACAGTGTGTCAAACCCTTCAAT
JMSF014O14+ AGGCAACGGCCAAAACCAAGAATGGGTTACTCTAGAATACAGTGTGTCAAACCCTTCAAT
JMFF014A24+ AGGCAACGGCCAAAACCAAGAATGGGTTACTCTAGAATACAGTGTGTCAAACCCTTCAAT
JMFF007A15+ AGGCAACGGCCAAAACCAAGAATGGGTTACTCTAGAATACAGTGTGTCAAACCCTTCAAT
JMFF031O02+ AGGCAACGGCCAAAACCAAGAATGGGTTACTCTAGAATACAGTGTGTCAAACCCTTCAAT
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consensus AGGCAACGGCCAAAACCAAGAATGGGTTACTCTAGAATACAGTGTGTCAAACCCTTCAAT

. : . : . : . : . : . :
JMSF027H24+ TGATGATTGGATTGGAGTATTTTCACCAGCCAACTTCAGTCAATCAACTTGTGTTCGTGA
JMSF014O14+ TGATGATTGGATTGGAGTATTTTCACCAGCCAACTTCAGTCAATCAACTTGTGTTCGTGA
JMFF014A24+ TGATGATTGGATTGGAGTATTTTCACCAGCCAACTTCAGTCAATCAACTTGTGTTCGTGA
JMFF007A15+ TGATGATTGGATTGGAGTATTTTCACCAGCCAACTTCAGTCAATCAACTTGTGTTCGTGA
JMFF031O02+ TGATGATTGGATTGGAGTATTTTCACCAGCCAACTTCAGTCAATCAACTTGTGTTCGTGA
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consensus TGATGATTGGATTGGAGTATTTTCACCAGCCAACTTCAGTCAATCAACTTGTGTTCGTGA

. : . : . : . : . : . :
JMSF027H24+ AAATCCAAGAATGTTTCCGCCACTATTGTGTACAGCACCCATAAAGTATCAATTTGCAAA
JMSF014O14+ AAATCCAAGAATGTTTCCGCCACTATTGTGTACAGCACCCA
JMFF014A24+ AAATCCAAGAATGTTTCCGCCACTATTGTGTACAGCACCCATAAAGTATCAATTTGCAAA
JMFF007A15+ AAATCCAAGAATGTTTCCGCCACTATTGTGTACAGCACCCATAAAGTATCAATTTGCAAA
JMFF031O02+ AAATCCAAGAATGTTTCCGCCACTATTGTGTACAGCACCCATAAAGTATCAATTTGCAAA
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consensus AAATCCAAGAATGTTTCCGCCACTATTGTGTACAGCACCCATAAAGTATCAATTTGCAAA

. : . : . : . : . : . :
JMSF027H24+ TTATGCGAGCCCTGGTTACAAAGACACGGGGAAAGGATCATTGAAGCTCCAATTGATCAA
JMFF014A24+ TTATGCGAGCCCTGGTTACAAAGACACGGGGAAAGGATCATTGAAGCTCCAATTGATCAA
JMFF007A15+ TTATGCGAGCCCTGGTTACAAAGACACGGGGAAAGGATCATTGAAGCTCCAATTGATCAA
JMFF031O02+ TTATGCGAGCCCTGGTTACAAAGACACGGGGAAAGGATCATTGAAGCTCCAATTGATCAA
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consensus TTATGCGAGCCCTGGTTACAAAGACACGGGGAAAGGATCATTGAAGCTCCAATTGATCAA

. : . : . : . : . : . :
JMSF027H24+ TCAGAGATTTGACTTCTCTTTTGTGTTGTTCACTGGTGGACTCTCGACACCAAAGCTGGT
JMFF014A24+ TCAGAGATTTGACTTCTCTTTTGTGTTGTTCACTGGTGGACTCTCGACACCAAAGCTGGT
JMFF007A15+ TCAGAGATTTGACTTCTCTTTTGTGTTGTTCACTGGTGGACTCTCGACACCAAAGCTGGT
JMFF031O02+ TCAGAGATTTGACTTCTCTTTTGTGTTGTTCACTGGTGGACTCTCGACACCAAAGCTGGT
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consensus TCAGAGATTTGACTTCTCTTTTGTGTTGTTCACTGGTGGACTCTCGACACCAAAGCTGGT

. : . : . : . : . : . :
JMSF027H24+ GGCAGTCTCGAATACAGTTGCCTTTGCAANTCCAAACGCACCTTTATACCCA
JMFF014A24+ GGCAGTCTCGAATACAGTTGCCTTTGCAAATCCAAACGCACCTTTATACCCA
JMFF007A15+ GGCAGTCTCGAATACAGTTGCCTTTGCAAATCCAAACGCACCTTTATACCCA
JMFF031O02+ GGCAGTCTCGAATACAGTTGCCTTTGCAAATCCAAACGCACCTTTATACCCACGGTTAGC
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consensus GGCAGTCTCGAATACAGTTGCCTTTGCAAATCCAAACGCACCTTTATACCCACGGTTAGC

. : . : . : . : . : . :
JMFF031O02+ CCAG
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consensus CCAG