Alignment Contig 2154

                          .    :    .    :    .    :    .    :    .    :    .    :

JMSF013F11+ GGGTGACTGAACACCAGAAGGGGAAACAAAACTATCCACTTTCTATGGAAATATTCACTG
JMSF023B07+ GACTGAACACCANAAGGGGAAACAAAACTATCCACTTTCTATGGAAATATTCACTG
JMSF013L18+ GACTGAACACCAGAAGGGGAAACAAAACTATCCACTTTCTATGGAAATATTCACTG
JMSF051N08+ GACTGAACACCAGAAGGGGAAACAAAACTATCCACTTTCTATGGAAATATTCACTG
JMSF029H20+ GACTGAACACCAGAAGGGGAAACAAAACTATCCACTTTCTATGGAAATATTCACTG
____________________________________________________________
consensus GGGTGACTGAACACCAGAAGGGGAAACAAAACTATCCACTTTCTATGGAAATATTCACTG

. : . : . : . : . : . :
JMSF013F11+ AGAATCAGGAATCATGAAATTCAGATTCCAGGAATCTTGGTGCCGGCCTTATATGATATG
JMSF023B07+ AGAATCAGGAATCATGAAATTCAGATTCCAGGAATCTTGGTGCCGGCCTTATATGATATG
JMSF013L18+ AGAATCAGGAATCATGAAATTCAGATTCCAGGAATCTTGGTGCCGGCCTTATATGATATG
JMSF051N08+ AGAATCAGGAATCATGAAATTCAGATTCCAGGAATCTTGGTGCCGGCCTTATATGATATG
JMSF029H20+ AGAATCAGGAATCATGAAATTCAGATTCCAGGAATCTTGGTGCCGGCCTTATATGATATG
____________________________________________________________
consensus AGAATCAGGAATCATGAAATTCAGATTCCAGGAATCTTGGTGCCGGCCTTATATGATATG

. : . : . : . : . : . :
JMSF013F11+ CCTACATGTTCATACGAATTCTTTAATCCCATGAGTGTATATATTTAGTAAACTCACAAA
JMSF023B07+ CCTACATGTTCATACGAATTCTTTAATCCCATGAGTGTATATATTTAGTAAACTCACAAA
JMSF013L18+ CCTACATGTTCATACGAATTCTTTAATCCCATGAGTGTATATATTTAGTAAACTCACAAA
JMSF051N08+ CCTACATGTTCATACGAATTCTTTAATCCCATGAGTGTATATATTTAGTAAACTCACAAA
JMSF029H20+ CCTACATGTTCATACGAATTCTTTAATCCCATGAGTGTATATATTTAGTAAACTCACAAA
____________________________________________________________
consensus CCTACATGTTCATACGAATTCTTTAATCCCATGAGTGTATATATTTAGTAAACTCACAAA

. : . : . : . : . : . :
JMSF013F11+ AATTGGCCTGCAGATGATGGAGCAATCGAAAGCCATGGAGGAAGATGATGTTTATACCAA
JMSF023B07+ AATTGGCCTGCAGATGATGGAGCAATCGAAAGCCATGGAGGAAGATGATGTTTATACCAA
JMSF013L18+ AATTGGCCTGCAGATGATGGAGCAATCGAAAGCCATGGAGGAAGATGATGTTTATACCAA
JMSF051N08+ AATTGGCCTGCAGATGATGGAGCAATCGAAAGCCATGGAGGAAGATGATGTTTATACCAA
JMSF029H20+ AATTGGCCTGCAGATGATGGAGCAATCGAAAGCCATGGAGGAAGATGATGTTTATACCAA
JMSF030G05+ GATGATGGAGCAATCGAAAGCCATGGAGGAAGATGATGTTTATACCAA
JMSF011D20+ GATGATGGAGCAATCGAAAGCCATGGAGGAAGATGATGTTTATACCAA
____________________________________________________________
consensus AATTGGCCTGCAGATGATGGAGCAATCGAAAGCCATGGAGGAAGATGATGTTTATACCAA

. : . : . : . : . : . :
JMSF013F11+ GGATGGGACATTGGATTATCGTAACAGACCAGCAAACAAGAAGAAAACAGGAAATTGGAA
JMSF023B07+ GGATGGGACATTGGATTATCGTAACAGACCAGCAAACAAGAAGAAAACAGGAAACTGGAA
JMSF013L18+ GGATGGGACATCGGATTATCGTAACAGACCAGCAAACAAGAAGAAAACAGGAAACTGGAA
JMSF051N08+ GGATGGGACATTGGATTATCGTAACAGACCAGCAAACAAGAAGAAAACAGGAAACTGGAA
JMSF029H20+ GGATGGGACATTGGATTATCGTAACAGACCAGCAAACAAGAAGAAAACAGGAAACTGGAA
JMSF030G05+ GGATGGGACATTGGATTATCGTAACAGACCAGCAAACAAGAAGAAAACAGGAAACTGGAA
JMSF011D20+ GGATGGGACATTGGATTATCGTAACAGACCAGCAAACAAGAAGAAAACAGGAAACTGGAA
____________________________________________________________
consensus GGATGGGACATTGGATTATCGTAACAGACCAGCAAACAAGAAGAAAACAGGAAACTGGAA

. : . : . : . : . : . :
JMSF013F11+ GGCCTGCCCTTTTATCTTGGGGAATGAATGCTCGGAGAGATTGGCGTACTATGGGATGAG
JMSF023B07+ GGCCTGCCCTTTTATCTTGGGGAATGAATGCTCGGAGAGATTGGCGTACTATGGGATGAG
JMSF013L18+ GGCCTGCCCTTTTATCTTGGGGAATGAATGCTCGGAGAGATTGGCGTACTATGGGATGAG
JMSF051N08+ GGCCTGCCCTTTTATCTTGGGGAATGAATGCTCGGAGAGATTGGCGTACTATGGGATGAG
JMSF029H20+ GGCCTGCCCTTTTATCTTGGGGAATGAATGCTCGGAGAGATTGGCGTACTATGGGATGAG
JMSF030G05+ GGCCTGCCCTTTTATCTTGGGGAATGAATGCTCGGAGAGATTGGCGTACTATGGGATGAG
JMSF011D20+ GGCCTGCCCTTTTATCTTGGGGAATGAATGCTCGGAGAGATTGGCGTACTATGGGATGAG
____________________________________________________________
consensus GGCCTGCCCTTTTATCTTGGGGAATGAATGCTCGGAGAGATTGGCGTACTATGGGATGAG

. : . : . : . : . : . :
JMSF013F11+ TTCAAATCTCATGATTTACTTCCAAACCCGTCTGAATCAATCCACCACCAGTGCTTCGAA
JMSF023B07+ TTCAAATCTCATGATTTACTTCCAAACCCGTCTGAATCNATCCACCACCAGTGCTTCGAA
JMSF013L18+ TTCAAATCTCATGATTTACTTCCAAACCCGTCTGAATCAATCCACCACCAGTGCTTCGAA
JMSF051N08+ TTCAAATCTCATGATTTACTTCCAAACCCGTCTGAATCAATCCACCACCAGTGCTTCGAA
JMSF029H20+ TTCAAATCTCATGATTTACTTCCAAACCCGTCTGAATCAATCCACCACCAGTGCTTCGAA
JMSF030G05+ TTCAAATCTCATGATTTACTTCCAAACCCGTCTGAATCAATCCACCACCAGTGCTTCGAA
JMSF011D20+ TTCAAATCTCATGATTTACTTCCAAACCCGTCTGAA
____________________________________________________________
consensus TTCAAATCTCATGATTTACTTCCAAACCCGTCTGAATCAATCCACCACCAGTGCTTCGAA

. : . : . : . : . : . :
JMSF013F11+ AAACCTGTCGAATTGGTCGGGGACCTGCTATATCATGCCGTTGGTCGGAGCGTTTCTTGC
JMSF023B07+ AAACCTGTCGAATTGGTCGGGGACCTGCTATATCATGCCGTTGGTCGGAGCGTTTCTTGC
JMSF013L18+ AAACCTGTCGAATTGGTCGGGGACCTGCTATATCATGCCGTTGGTCGGAGCGTTTCTTGC
JMSF051N08+ AAACCTGTCGAATTGGTCGGGGACCTGCTATATCATGCCGTTGGTCGGAGCGTTTCTTGC
JMSF029H20+ AAACCTGTCGAATTGGTCGGGGACCTGCTATATCATGCCGTTGGTCGGAGCGTTTCTTGC
JMSF030G05+ AAACCTGTCGAATTGGTCGGGGACCTGCTATATCATGCCGTTGGTCGGAGCGTTTCTTGC
____________________________________________________________
consensus AAACCTGTCGAATTGGTCGGGGACCTGCTATATCATGCCGTTGGTCGGAGCGTTTCTTGC

. : . : . : . : . : . :
JMSF013F11+ TGATGCATATCTGGGAA
JMSF023B07+ TGATGCATATCTGGGAAGATACTGGACCATTGCCACCTTCTCTATCATCTATGTTATGG
JMSF013L18+ TGATGCATATCTGGGAAGA
JMSF051N08+ TGATGCATATCTGGGAAGATACTGGACCATTGCCACCTTCTCTATCATCTATGTTATGGG
JMSF029H20+ TGATGCATATCTGGGAAGATACTGGACCATTGCCACCTTCTCTATCATCTATGTTATGGG
JMSF030G05+ TGATGCATATCTGGGAAGATACTGGACCATTGCCACCTTCTCTATCATCTATGTTATGGG
____________________________________________________________
consensus TGATGCATATCTGGGAAGATACTGGACCATTGCCACCTTCTCTATCATCTATGTTATGGG

. : . : . : . : . : . :
JMSF051N08+ GATGACATTGATGACACTATCAGCAACAGTTCCTGGAATTAGCCCAACCTGTATCGCACA
JMSF029H20+ GATGACATTGATGACACTATCAGCAACAGTTCCTGGAATTAGCCCAACCTGTATCGCACA
JMSF030G05+ GATGACATTGATGACACTATCAGCAACAGTTCCTGGAATTAGCCCAACCTGTATCGCACA
____________________________________________________________
consensus GATGACATTGATGACACTATCAGCAACAGTTCCTGGAATTAGCCCAACCTGTATCGCACA

. : . : . : . : . : . :
JMSF051N08+ TGATAAGTGCACCGCGACAGGGAGAGACACCGCGGTGTGCTTCATCGCCCTGTACTTGGT
JMSF029H20+ TGATAAGTGCACCGCGACAGGGAGAGACACCGCGGTGTGCTTCATCGCCCTGTACTTGGT
JMSF030G05+ TGATAAGTGCACCGCGACAGGGAGAGACACCGCGGTGTGCTTCATCGCCCTGTACTTGGT
____________________________________________________________
consensus TGATAAGTGCACCGCGACAGGGAGAGACACCGCGGTGTGCTTCATCGCCCTGTACTTGGT

. : . : . : . : . : . :
JMSF051N08+ GGCGCTAGGGACCGGGGGGATCAAGCCCTGCGTCTCATCC
JMSF029H20+ GGCGCTAGGGAC
JMSF030G05+ GGCGCTAGGGACCGGGGGGATCAAGCCCTGCGTCTCATCCTACGGCGCAGACCAGTTTGA
JMSF036P14+ ACCGGGGGGATCAAGCCCTGCGTCTCATCCTACGGCGCAGACCAGTTTGA
____________________________________________________________
consensus GGCGCTAGGGACCGGGGGGATCAAGCCCTGCGTCTCATCCTACGGCGCAGACCAGTTTGA

. : . : . : . : . : . :
JMSF030G05+ TGACAC
JMSF036P14+ TGACACCGATGAAAAGGAAAGAAAGCACAAGAGTTCTTTCTTCAATTGGTTCTATTTCTC
____________________________________________________________
consensus TGACACCGATGAAAAGGAAAGAAAGCACAAGAGTTCTTTCTTCAATTGGTTCTATTTCTC

. : . : . : . : . : . :
JMSF036P14+ AATCAATGTTGGGGCGCTCGTGGCGGCCTCTCTGATCGTGTGGATTCAACAGGACGTGAG
____________________________________________________________
consensus AATCAATGTTGGGGCGCTCGTGGCGGCCTCTCTGATCGTGTGGATTCAACAGGACGTGAG

. : . : . : . : . : . :
JMSF036P14+ CTGGGGGTGGGGATTCGGTGTTCCTGCGGTGGCTATGGCATTGGCTGTCACCTTTTTCTT
____________________________________________________________
consensus CTGGGGGTGGGGATTCGGTGTTCCTGCGGTGGCTATGGCATTGGCTGTCACCTTTTTCTT

. : . : . : . : . : . :
JMSF036P14+ CTCGGGGACTCGTTTGTATCGGTACCAGAAGCCCGGGGGCAGCCCTTTCACGCGGCTGTT
____________________________________________________________
consensus CTCGGGGACTCGTTTGTATCGGTACCAGAAGCCCGGGGGCAGCCCTTTCACGCGGCTGTT

. : . : . : . : . : . :
JMSF036P14+ TCAGGTTGTCGTGGCTTCTTTAAGGAAACGTAAGGTTAAAGTGCCGTCCGACAAATCTCT
____________________________________________________________
consensus TCAGGTTGTCGTGGCTTCTTTAAGGAAACGTAAGGTTAAAGTGCCGTCCGACAAATCTCT

. : . : . : . : . : . :
JMSF036P14+ TTTGCACGAGACCGTAGGCCTTGAATCAAACATCCAAGGGAGTCGTAAGCTTAGCCACAC
____________________________________________________________
consensus TTTGCACGAGACCGTAGGCCTTGAATCAAACATCCAAGGGAGTCGTAAGCTTAGCCACAC

. : . : . : . : . : . :
JMSF036P14+ AAATGAGCTAAGATTCTTTGACAAGGCAGCAGTGGTGGAAGAATCATTAGATGAAGACAA
____________________________________________________________
consensus AAATGAGCTAAGATTCTTTGACAAGGCAGCAGTGGTGGAAGAATCATTAGATGAAGACAA

. : . : . : . : . : . :
JMSF036P14+ GAAGGGCTCAGTTAGTCCATGGAGACTATGCACTGTGACACAAGTTGAGGAACTCAAGTC
____________________________________________________________
consensus GAAGGGCTCAGTTAGTCCATGGAGACTATGCACTGTGACACAAGTTGAGGAACTCAAGTC

. : . : . : . : . : . :
JMSF036P14+ CATTATTCGCCTCCTCCCAATCTGGGCAACCGGCATAATCTTCAGCACAGTGTACGGCCA
____________________________________________________________
consensus CATTATTCGCCTCCTCCCAATCTGGGCAACCGGCATAATCTTCAGCACAGTGTACGGCCA

. : . : . : . : . : . :
JMSF036P14+ AATGGGCACACAGTTTATATCACAAGCCGAAGGCATGAACACCTACGTAGGAACCTTCAA
____________________________________________________________
consensus AATGGGCACACAGTTTATATCACAAGCCGAAGGCATGAACACCTACGTAGGAACCTTCAA

. : . : . : . : . : . :
JMSF036P14+ ANTCCCCGANGCATCCCTCGGCGTT
____________________________________________________________
consensus ANTCCCCGANGCATCCCTCGGCGTT