Alignment Contig 2152

                          .    :    .    :    .    :    .    :    .    :    .    :

JMSF013C21+ GGTGCTTTTGACTGTCTCTTCACATGTCGCACCCAAACAAAAAATAAATAATAATAGAAA
JMSF050N24+ AAATANATAATAATANAAA
____________________________________________________________
consensus GGTGCTTTTGACTGTCTCTTCACATGTCGCACCCAAACAAAAAATAAATAATAATAGAAA

. : . : . : . : . : . :
JMSF013C21+ AAAAAATAAACAAGGAAGAAAATTCATTCGCCCCCTTTTCTTCATCTTCTGAAACGGAGG
JMSF050N24+ AAAAAATAAACNAGGAAGAAAATTCATTCGCCCCCTTTTCTTCATCTTCTGAAACGGANG
JMSF045F20+ AAAATTCATTCGCCCCCTTTTCTTCATCTTCTGAAACGGAGG
____________________________________________________________
consensus AAAAAATAAACAAGGAAGAAAATTCATTCGCCCCCTTTTCTTCATCTTCTGAAACGGAGG

. : . : . : . : . : . :
JMSF013C21+ GATTTCTAGGGTTCTGTGGTCGAGGTTATGGAATTGAGAAGTACGGCTCCGTACTGTTCT
JMSF050N24+ GATTTCTAGGGTTCTGTGGTCGAGGTTATGGAATTGANAAGTACGGCTCCGTACTGTTCT
JMSF045F20+ GATTTCTAGGGTTCTGTGGTCGAGGTTATGGAATTGAGAAGTACGGCTCCGTACTGTTCT
____________________________________________________________
consensus GATTTCTAGGGTTCTGTGGTCGAGGTTATGGAATTGAGAAGTACGGCTCCGTACTGTTCT

. : . : . : . : . : . :
JMSF013C21+ GTTCCTACAGCTGTTGTACTGTGGCTGTTGAGCTGCTCCGCTCTGGTTCATG
JMSF050N24+ GTTCCTACAGCTGTTGTACTGTGGCTGTTGAGCTGCTCCGCTCTGGTTCATGGCGGTGAT
JMSF045F20+ GTTCCTACAGCTGTTGTACTGTGGCTGTTGAGCTGCTCCGCTCTGGTTCATGGCGGTGAT
JMSF029E14+ TGGTTCAAGGTGGCGAT
JMSF034J19+ TGGTTCATGGCGGTGAT
____________________________________________________________
consensus GTTCCTACAGCTGTTGTACTGTGGCTGTTGAGCTGCTCCGCTCTGGTTCATGGCGGTGAT

. : . : . : . : . : . :
JMSF050N24+ ATAGTTCACCATGATGATGTGGC
JMSF045F20+ ATAGTTCACCATGATGATGTGGCTCCAAGGAGAGCTGGTTGTGATAACAATTTTGTTCTG
JMSF029E14+ ATTGTTCACCATGATGATAAGACTCCAAGGAGACCTGGTTGTGATAACAACTTTGTTCTG
JMSF034J19+ ATAGTTCACCATGATGATGTGGCTCCAAGGAGAGCTGGTTGTGATAACAATTTTGTTCTG
____________________________________________________________
consensus ATAGTTCACCATGATGATGTGGCTCCAAGGAGAGCTGGTTGTGATAACAATTTTGTTCTG

. : . : . : . : . : . :
JMSF045F20+ GTAAAAGTTGCAACCTGGATCAATGGTAAAGAAGAAATGGAATTTGTTGGAGTTGGTGCG
JMSF029E14+ GTAGAAGTCGCGACCTGGATTAATGGTAAGGAAGAAATGGAATTTGTTGGGATTGGTGCT
JMSF034J19+ GTAAAAGTTGCAACCTGGATCAATGGTAAAGAAGAAATGGAATTTGTTGGAGTTGGTGCG
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consensus GTAAAAGTTGCAACCTGGATCAATGGTAAAGAAGAAATGGAATTTGTTGGAGTTGGTGCG

. : . : . : . : . : . :
JMSF045F20+ AGATTCGGCCCCACCTTGGAGTCGAAGGAGAAGCGAGCAAATCAAACAAGACTTGCTCTT
JMSF029E14+ CGATTTGGCCTCACCTTGGAGTCGAAGGAGAAGCGTGCCAATCAAATAAGGCTCGCACTT
JMSF034J19+ AGATTCGGCCCCACCTTGGAGTCGAAGGAGAAGCGAGCAAATCAAACAAGACTTGCTCTT
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consensus AGATTCGGCCCCACCTTGGAGTCGAAGGAGAAGCGAGCAAATCAAACAAGACTTGCTCTT

. : . : . : . : . : . :
JMSF045F20+ GCTGACCCACCTGATTGTTGTAGCAAACCGAGGAATAAGCTTACTGGTGAGGCCATATTA
JMSF029E14+ GCTGACCCTCCTGATTGTTGTAGTGTACCAAGGAATAAGCTCACTGGTGAGGCAATATTG
JMSF034J19+ GCTGACCCACCTGATTGTTGTAGCAAACCGAGGAATAAGCTTACTGGTGAGGCCATATTA
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consensus GCTGACCCACCTGATTGTTGTAGCAAACCGAGGAATAAGCTTACTGGTGAGGCCATATTA

. : . : . : . : . : . :
JMSF045F20+ GTACATCGTGGCAATTGCAGTTTCACTACCAAAGCAAATGTTGCAGATGATGCCGGTGCT
JMSF029E14+ GTGCATCGGGGCAATTGCAGCTTCACTACCAAAGCAAATGTTGCTGAAGCTGCTGGTGCT
JMSF034J19+ GTACATCGTGGCAATTGCAGTTTCACTACCAAAGCAAATGTTGCAGATGATGCCGGTGCT
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consensus GTACATCGTGGCAATTGCAGTTTCACTACCAAAGCAAATGTTGCAGATGATGCCGGTGCT

. : . : . : . : . : . :
JMSF045F20+ TCAGCTATCCTCATTATAAACAACCAAACAGAGCTCTTCAAGATGGTTTGCGAAGGAAAT
JMSF029E14+ TCAGCTATCCTCATTATAAACAACCAAACAGAGCTCTTCAAGATGGTTTGTGAAAAAAAC
JMSF034J19+ TCAGCTATCCTCATTATAAACAACCAAACAGAGCTCTTCAAGATGGTTTG
____________________________________________________________
consensus TCAGCTATCCTCATTATAAACAACCAAACAGAGCTCTTCAAGATGGTTTGCGAAAAAAAC

. : . : . : . : . : . :
JMSF045F20+ GAGACTGATTTGGTTATTGGCATACCTGCTATCATGCTCCCACAAGATGCTGGTCTAAGC
JMSF029E14+ GAAACTGATCTGGATATTGGCATACCTGCGATTATGCTCCCACAAGATGCTGGTCAAAGC
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consensus GAAACTGATCTGGATATTGGCATACCTGCGATCATGCTCCCACAAGATGCTGGTCAAAGC

. : . : . : . : . : . :
JMSF045F20+ TTGATAGAAAATATAATGAACAAGTCAATGGTTTCTGTGCAGCTGTATTCTCCAAGGCGC
JMSF029E14+ ATGATAGAAAA
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consensus ATGATAGAAAATATAATGAACAAGTCAATGGTTTCTGTGCAGCTGTATTCTCCAAGGCGC

. : . : . : . : . : . :
JMSF045F20+ CCTGTGGTTGATGTAGCTGAAGTATTTCTGTGGCTTATGGCTGTTGCTACCATTTTATGT
____________________________________________________________
consensus CCTGTGGTTGATGTAGCTGAAGTATTTCTGTGGCTTATGGCTGTTGCTACCATTTTATGT

. : . : . : . : . : . :
JMSF045F20+ GCATCGTACTGGTCTGCATGGACTGCCAGAGAAGCTGCAATTCAGCAGGATAAGCTGTTG
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consensus GCATCGTACTGGTCTGCATGGACTGCCAGAGAAGCTGCAATTCAGCAGGATAAGCTGTTG

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JMSF045F20+ AAAGATGGCTCGGATGAATACTGTGGCATGGAGGCTACACAGTCTAG
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consensus AAAGATGGCTCGGATGAATACTGTGGCATGGAGGCTACACAGTCTAG