Alignment Contig 2099

                          .    :    .    :    .    :    .    :    .    :    .    :

JMSF007M18+ GTGATAAACCCTAACACCAATGATGGCCATGGCAGCAATTCATTTCCTTCCATCTTCCCT
JMSF014D08+ ATAAACCCTAACACCAATGATGGCCATGGCAGCAATTCATTTCCTTCCATCTTCCCT
JMSF011I16+ ATAAACCCTAACACCAATGATGGCCATGGCAGCAATTCATTTCCTTCCATCTTCCCT
JMSF025I10+ ATAAACCCTAACACCAATGATGGCCATGGCAGCAATTCATTTCCTTCCATCTTCCCT
JMSF029A06+ GCAATTCATTTCCTTCCATCTTCCCT
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consensus GTGATAAACCCTAACACCAATGATGGCCATGGCAGCAATTCATTTCCTTCCATCTTCCCT

. : . : . : . : . : . :
JMSF007M18+ TTCTCAGCATTCTCACTCTCTAGCCCTCAACTCTCTTACCCATTTCAAAGTATCAACCTT
JMSF014D08+ TTCTCAGCATTCTCACTCTCTAGCCCTCAACTCTCTTACCCATTTCAAAGTATCAACCTT
JMSF011I16+ TTCTCAGCATTCTCACTCTCTAGCCCTCAACTCTCTTACCCATTTCAAAGTATCAACCTT
JMSF025I10+ TTCTCAGCATTCTCACTCTCTAGCCCTCAACTCTCTTACCCATTTCAAAGTATCAACCTT
JMSF029A06+ TTCTCAGCATTCTCACTCTCTAGCCCTCAACTCTCTTACCCATTTCAAAGTATCAACCTT
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consensus TTCTCAGCATTCTCACTCTCTAGCCCTCAACTCTCTTACCCATTTCAAAGTATCAACCTT

. : . : . : . : . : . :
JMSF007M18+ TTTACCCAAACACCGTTACGTTTGCCACCCAAATCCGCCAAAGTCCTCCTCCGCCGATGA
JMSF014D08+ TTTACCCAAACACCGTTACGTTTGCCACCCAAATCCGCCAAAGTCCTCCTCCGCCGATGA
JMSF011I16+ TTTACCCAAACACCGTTACGTTTGCCACCCAAATCCGCCAAAGTCCTCCTCCGCCGATGA
JMSF025I10+ TTTACCCAAACACCGTTACGTTTGCCACCCAAATCCGCCAAAGTCCTCCTCCGCCGATGA
JMSF029A06+ TTTACCCAAACACCGTTACGTTTGCCACCCAAATCCGCCAAAGTCCTCCTCCGCCGATGA
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consensus TTTACCCAAACACCGTTACGTTTGCCACCCAAATCCGCCAAAGTCCTCCTCCGCCGATGA

. : . : . : . : . : . :
JMSF007M18+ CCACACCACCACTCAACAACCCTCAAAAACCTCCCGCCGTGCCCTGAAAAAGACTTCACC
JMSF014D08+ CCACACCACCACTCAACAACCCTCAAAAACCTCCCGCCGTGCCCTGAAAAAGACTTCACC
JMSF011I16+ CCACACCACCACTCAACAACCCTCAAAAACCTCCCGCCGTGCCCTGAAAAAGACTTCACC
JMSF025I10+ CCACACCACCACTCAACAACCCTCAAAAACCTCCCGCCGTGCCCTGAAAAAGACTTCACC
JMSF029A06+ CCACACCACCACTCAACAACCCTCAAAAACCTCCCACCGTGCCCTGAAAAAGACTTCACC
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consensus CCACACCACCACTCAACAACCCTCAAAAACCTCCCGCCGTGCCCTGAAAAAGACTTCACC

. : . : . : . : . : . :
JMSF007M18+ TTCTTCAAAGCCCAGAGGTCGTCCAAAAAAAGAACCTC
JMSF014D08+ TTCTTCAAAGCCCAGAGGTCGTCCAAAAAAAGAACCTCAAAGTGAAACCATAGAATCTGT
JMSF011I16+ TTCTTCAAAGCCCAGAGGTCGTCCAAAAAAAGAACCTCAAA
JMSF025I10+ TTCTTCAAAGCCCAGAGGTCGTCCAAAAAAAGAACCTCAAAGTGAAACCATAGAATCTGT
JMSF029A06+ TTCTTCAAAGCCCAGAGGTCGTCCAAAAAAAGAACCTCAAAGTGAAACCATAGAATCTGT
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consensus TTCTTCAAAGCCCAGAGGTCGTCCAAAAAAAGAACCTCAAAGTGAAACCATAGAATCTGT

. : . : . : . : . : . :
JMSF014D08+ CGCTACAAAAAGGTCCAGGGCTCGTCCAAGAAAAGAAACTCAAAGTGACACCGAAGAATT
JMSF025I10+ CGCTACAAAAAGGTCCAGGGCTCGTCCAAGAAAAGAAACTCAAAGTGACACCGAAGAATT
JMSF029A06+ CGCTACAAAAAGGTCCAGGGCTCGTCCAAGAAAAGAAACTCAAAGTGACACCGAAGAATT
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consensus CGCTACAAAAAGGTCCAGGGCTCGTCCAAGAAAAGAAACTCAAAGTGACACCGAAGAATT

. : . : . : . : . : . :
JMSF014D08+ TGAGTCCTACGTTGAGCCTCCGGTAAATGCTGACGAGGTAGACGATTACGACGACGGTGT
JMSF025I10+ TGAGTCCTACGTTGAGCCTCCGGTAAATGCTGACGAGGTAGACGATTACGACGACGGTGT
JMSF029A06+ TGAGTCCTACGTTGAGCCTCCGGTAAATGCTGACGAGGTAGACGATTACGACGACGGTGT
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consensus TGAGTCCTACGTTGAGCCTCCGGTAAATGCTGACGAGGTAGACGATTACGACGACGGTGT

. : . : . : . : . : . :
JMSF014D08+ CGATTTTCCCTACGAATCCCCGCCTCTGATATGCTGCTTCGGGGCGGCCCAGAAGGAGTT
JMSF025I10+ CGATTTTCCCTACGAATCCCCGCCTCTGATATGCTGCTTCGGGGCGGCCCAGAAGGAGTT
JMSF029A06+ CGATTTTCCCTACGAATCCCCGCCTCTGATATGCTGCTTCGGGGCGGCCCAGAAGGAGTT
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consensus CGATTTTCCCTACGAATCCCCGCCTCTGATATGCTGCTTCGGGGCGGCCCAGAAGGAGTT

. : . : . : . : . : . :
JMSF014D08+ CGTG
JMSF025I10+ CGTGCCCACGGTGAGGGTGGCGCCGGAGCAAATGGACCCGGATATATATTCCGAATGGAA
JMSF029A06+ CGTGCCCACGGTGAGGGTGGCGCCGGAGCAAATGGACCCGGATATATATTCCGAATGGAA
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consensus CGTGCCCACGGTGAGGGTGGCGCCGGAGCAAATGGACCCGGATATATATTCCGAATGGAA

. : . : . : . : . : . :
JMSF025I10+ GATGCTGCAGTGGAACCCGCCGGAGTTCGTCAGAGCTCCGGGAGGGCCGCCGTCAAATGT
JMSF029A06+ GATGCTGCAGTGGAACCCGCCGGAGTTCGTCAGAGCTCCGGGAGGGCCGCCGTCAAATGT
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consensus GATGCTGCAGTGGAACCCGCCGGAGTTCGTCAGAGCTCCGGGAGGGCCGCCGTCAAATGT

. : . : . : . : . : . :
JMSF025I10+ GGCTATATCTCACGTGAGGCTGGGTGGGAGAGCCGCGTTTATGGGGAAAGTCGGGGAT
JMSF029A06+ GGCTATATCTCACGTGAGGCTGGGTGGGAGAGCCGCGTTTATGGGGAAAGTCGGGGATGA
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consensus GGCTATATCTCACGTGAGGCTGGGTGGGAGAGCCGCGTTTATGGGGAAAGTCGGGGATGA

. : . : . : . : . : . :
JMSF029A06+ CGAGTTTGGGGAA
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consensus CGAGTTTGGGGAA