Alignment Contig 1865

                          .    :    .    :    .    :    .    :    .    :    .    :

JMFN043B10+ TCGAGXXXXXXXXXXXXXXXXXXXATTTAAAGCTGCACCATAGTTTGTTGATAGTGAATT
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consensus TCGAGNNNNNNNNNNNNNNNNNNNATTTAAAGCTGCACCATAGTTTGTTGATAGTGAATT

. : . : . : . : . : . :
JMFN043B10+ TTGATTACAAAAGGTTTAGGATCCAACCTTGGTAACTATATTATTGAAGATTTTTTTTTT
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consensus TTGATTACAAAAGGTTTAGGATCCAACCTTGGTAACTATATTATTGAAGATTTTTTTTTT

. : . : . : . : . : . :
JMFN043B10+ TTTTTTAATTTTTCGACCCCATTGATCGAAATTTCTGACTCCACCGCACTTTCTACTCAT
rJMFF019I15+ ATTTCTGACTCCACCGCACTTTCTACTCAT
rJMFF027O10+ ATTTCTGACTCCACCGCACTTTCTACTCAT
rJMFF030H11+ ATTTCTGACTCCACCGCACTTTCTACTCAT
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consensus TTTTTTAATTTTTCGACCCCATTGATCGAAATTTCTGACTCCACCGCACTTTCTACTCAT

. : . : . : . : . : . :
JMFN043B10+ -GTATAAATACTTAATACGAACTAATAGTGGCTGGGGTTACCTCTGGGAGGAGGATATCC
rJMFF019I15+ AGTATAAATACTTAATACAAACTAATAGTGGTTGGGGTTAGTTCTGGGTGGTGGAGATCC
rJMFF004C18+ GGAGATCC
rJMFF027O10+ AGTATAAATACTTAATACAAACTAATAGTGGTTGGGGTTAGTTCTGGGTGGTGGAGATCC
rJMFF030H11+ AGTATAAATACTTAATACAAACTAATAGTGGTTGGGGTTAGTTCTGGGTGGTGGAGATCC
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consensus AGTATAAATACTTAATACAAACTAATAGTGGTTGGGGTTAGTTCTGGGTGGTGGAGATCC

. : . : . : . : . : . :
JMFN043B10+ CTTGAGAAATGCCTTAAAAAGCGTGATATCTTGCGAGGGATATGAAGATGGCACTAAATG
rJMFF019I15+ CTTGAGAAATGCCTTAAAAAGTGTGAGAGCTTGCGAGGGAGATGAAGATGGCACAAAATG
rJMFF004C18+ CTTGAGAAATGCCTTAAAAAGTGTGAGAGCTTGCGAGGGANATGAAGATGGCACAAAATG
rJMFF027O10+ CTTGAGAAATGCCTTAAAAAGTGTGAGAGCTTGCGAGGGAGATGAAGATGGCACAAAATG
rJMFF030H11+ CTTGAGAAATGCCTTAAAAAGTGTGAGAGCTTGCGAGGGAGATGAAGATGGCACAAAATG
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consensus CTTGAGAAATGCCTTAAAAAGTGTGAGAGCTTGCGAGGGAGATGAAGATGGCACAAAATG

. : . : . : . : . : . :
JMFN043B10+ ACCTCCACCCCTTACTGGTGCGAATGAACAAATTTCCCACCTTGATACATCTGCCCGACA
rJMFF019I15+ AGCTCCACCCCTTACTGTTGCAAATGT-CAAATTTCCCACCTTGTTACATCTGCCCGAGT
rJMFF004C18+ AGCTCCACCCCTTACTGTTGCAAATGT-CAAATTTCCCACCTTGTTACATCTGCCCGAGT
rJMFF027O10+ AGCTCCACCCCTTACTGTTGCAAATGT-CAAATTTCCCACCTTGTTACATCTGCCCGAGT
rJMFF030H11+ AGCTCCACCCCTTACTGTTGCAAATGT-CAAATTTCCCACCTTGTTACATCTGCCCGAGT
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consensus AGCTCCACCCCTTACTGTTGCAAATGT-CAAATTTCCCACCTTGTTACATCTGCCCGAGT

. : . : . : . : . : . :
JMFN043B10+ TTCCAAATGTTTGACTCCATCC
rJMFF019I15+ TTCCGAATGTTTGACTCCATCCTCCAATCTCTTTGCCATCATACCAAGGTCCATTCATCT
rJMFF004C18+ TTCCGAATGTTTGACTCCATCCTCCAATCTCTTTGCCATCATACCAAGGTCCATTCATCT
rJMFF027O10+ TTCCGAATGTTTGACTCCATCCTCCAATCTCTTTGCCATCATACCAAGGTCCATTCATCT
rJMFF030H11+ TTCCGAATGTTTGACTCCATCCTCCAATCTCTTTGCCATCATACCAAGGTCCATTCATCT
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consensus TTCCGAATGTTTGACTCCATCCTCCAATCTCTTTGCCATCATACCAAGGTCCATTCATCT

. : . : . : . : . : . :
rJMFF019I15+ CCAAAGTGGTGAGCTTCAAGCGTACAGCAAGCACGGTTGCAACTTCCCTAGTGTGTGAGA
rJMFF004C18+ CCAAAGTGGTGAGCTTCAAGCGTACAGCAAGCACGGTTGCAACTTCCCTAGTGTGTGAGA
rJMFF027O10+ CCAAAGTGGTGAGCTTCAAGCGTACAGCAAGCACGGTTGCAACTTCCCTAGTGTGTGAGA
rJMFF030H11+ CCAAAGTGGTGAGCTTCAAGCGTACAGCAAGCACGGTTGCAACTTCCCTAGTGTGTGAGA
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consensus CCAAAGTGGTGAGCTTCAAGCGTACAGCAAGCACGGTTGCAACTTCCCTAGTGTGTGAGA

. : . : . : . : . : . :
rJMFF019I15+ CAGGAATTCTTAAATCTTGATCTCCACTGTAAATCAGAACTGGGATATCACTCATTAGAA
rJMFF004C18+ CAGGAATTCTTAAATCTTGATCTCCACTGTAAATCAGAACTGGGATATCACTCATTAGAA
rJMFF027O10+ CAGGAATTCTTAAATCTTGATCTCCACTGTAAATCAGAACTGGGATATCACTCATTAGAA
rJMFF030H11+ CAGGAATTCTTAAATCTTGATCTCCACTGTAAATCAGAACTGGGATATCACTCATTAGAA
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consensus CAGGAATTCTTAAATCTTGATCTCCACTGTAAATCAGAACTGGGATATCACTCATTAGAA

. : . : . : . : . : . :
rJMFF019I15+ GTGCTGACAATGTTGGCAATATGTCAATAGCAAAGTTGTGCAAAATCACATCACTCGTTT
rJMFF004C18+ GTGCTGACAATGTTGGCAATATGTCAATAGCAAAGTTGTGCAAAATCACATCACTCGTTT
rJMFF027O10+ GTGCTGACAATGTTGGCAATATGTCAATAGCAAAGTTGTGCAAAATCACATCACTCGTTT
rJMFF030H11+ GTGCTGACAATGTTGGCAATATGTCAATAGCAAAGTTGTGCAAAATCACATCACTCGTTT
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consensus GTGCTGACAATGTTGGCAATATGTCAATAGCAAAGTTGTGCAAAATCACATCACTCGTTT

. : . : . : . : . : . :
rJMFF019I15+ TCCCAGGAGAAGTAAAATTCCAAGGATATTGCCAGCCAGTTGTATTGGCATGTAAAGCTT
rJMFF004C18+ TCCCAGGAGAAGTAAAATTCCAAGGATATTGCCAGCCAGTTGTATTGGCATGTAAAGCTT
rJMFF027O10+ TCCCAGGAGAAGTAAAATTCCAAGGATATTGCCAGCCAGTTGTATTGGCATGTAAAGCTT
rJMFF030H11+ TCCCAGGAGAAGTAAAATTCCAAGGATATTGCCAGCCAGTTGTATTGGCATGTAAAGCTT
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consensus TCCCAGGAGAAGTAAAATTCCAAGGATATTGCCAGCCAGTTGTATTGGCATGTAAAGCTT

. : . : . : . : . : . :
rJMFF019I15+ TCTGAACATCTGGCCTGTTTATGTACTCACCTACCCAATCACGAAGGCATGGATCGGCTG
rJMFF004C18+ TCTGAACATCTGGCCTGTTTATGTACTCACCTACCCAATCACGAAGGCATGGATCGGCTG
rJMFF027O10+ TCTGAACATCTGGCCTGTTTATGTACTCACCTACCCAATCACGAAGGCATGGATCGGCTG
rJMFF030H11+ TCTGAACATCTGGCCTGTTTATGTACTCACCTACCCAATCACGAAGGCATGGATCGGCTG
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consensus TCTGAACATCTGGCCTGTTTATGTACTCACCTACCCAATCACGAAGGCATGGATCGGCTG

. : . : . : . : . : . :
rJMFF019I15+ TTTCAGTAGCAAGATAATGTTGTTGAGATGATGAGATTGAGGAGGATTCGCATGATTGAA
rJMFF004C18+ TTTCAGTANCAAGATAATGTTGTTGAGATGATGAGATTG
rJMFF027O10+ TTTCAGTAGCAAGATAATGTTGTTGAGATGATGAGATTGAGGAGGATTCGCATGATTGAA
rJMFF030H11+ TTTCAGTAGCAAGATAATGTTGTTGAGATGATGAGATTGAGGAGGATTCGCATGATTGAA
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consensus TTTCAGTAGCAAGATAATGTTGTTGAGATGATGAGATTGAGGAGGATTCGCATGATTGAA

. : . : . : . : . : . :
rJMFF019I15+ AGACTAAATTTTCCTTATCCATATCATGCCCAATTTCCTCCGACAACATAATTTCTATGT
rJMFF027O10+ AGACTAAATTTTCCTTATCCATATCATGCCCAATTTCCTCCGACAACATAATTTCTATGT
rJMFF030H11+ AGACTAAATTTTCCTTATCCATATCATGCCCAATTTCCTCCGACAACATAATTTCTATGT
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consensus AGACTAAATTTTCCTTATCCATATCATGCCCAATTTCCTCCGACAACATAATTTCTATGT

. : . : . : . : . : . :
rJMFF019I15+ CAGAGCAATATTCAGACAATTCTCCGCTTAA
rJMFF027O10+ CAGAGCAATATTCAGACAATTCTCCGC
rJMFF030H11+ CAGAGCAATATTCAGACAATTCTCCGC
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consensus CAGAGCAATATTCAGACAATTCTCCGCTTAA