Alignment Contig 166

                          .    :    .    :    .    :    .    :    .    :    .    :

JMFF029H04+ AGCTGTCAATTTTGACAGTGTCGGCCATTCTCTTTTCCCAACTCAACCCAATCTGATCAA
JMFF020I14+ GTCAATTTTGACAGTGTCGGCCATTCTCTTTTCCCAACTCAACCCAATCTGATCAA
JMFF009P16+ GTCGGCCATTCTCTTTTCCCAACTCAACCCAATCTGATCAA
JMFF037F16+ GTCGGCCATTCTCTTTTCCCAACTCAACCCAATCTGATCAA
____________________________________________________________
consensus AGCTGTCAATTTTGACAGTGTCGGCCATTCTCTTTTCCCAACTCAACCCAATCTGATCAA

. : . : . : . : . : . :
JMFF029H04+ CACATATTTTCTTCGTTCCTTTCTGAATCTCAATTTCTTTTGTTTTGATTCGATTTTCGA
JMFF020I14+ CACATATTTTCTTCGTTCCTTTCGGAATCTCAATTTCTTTTGTTTTGATTCGATTTTCGA
JMFF009P16+ CACATATTTTCTTCGTTCCTTTCTGAATCTCAATTTCTTTTGTTTTGATTCGATTTTCGA
JMFF037F16+ CACATATTTTCTTCGTTCCTTTCTGAATCTCAATTTCTTTTGTTTTGATTCGATTTTCGA
JMFF049D09+ ATATTTTCTTCGTTCCTTTCTGAATCTCAATTTCTTTTGTTTTGATTCGATTTTCGA
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consensus CACATATTTTCTTCGTTCCTTTCTGAATCTCAATTTCTTTTGTTTTGATTCGATTTTCGA

. : . : . : . : . : . :
JMFF029H04+ GACGCGAGGCCGGATTGAATCGGATCCGATCCGAATTTTGTTAGGTCGAAGAGAATGGCG
JMFF020I14+ GACGCGAGGCCGGATTGAATCGGATCCGATCCGAATTTTGTTAGGTCGAAGAGAATGGCG
JMFF009P16+ GACGCGAGGCCGGATTGAATCGGATCCGATCCGAATTTTGTTAGGTCGAAGAGAATGGCG
JMFF037F16+ GACGCGAGGCCGGATTGAATCGGATCCGATCCGAATTTTGTTAGGTCGAAGAGAATGGCG
JMFF049D09+ GACGCGAGGCCGGATTGAATCGGATCCGATCCGAATTTTGTTAGGTCGAAGAGAATGGCG
____________________________________________________________
consensus GACGCGAGGCCGGATTGAATCGGATCCGATCCGAATTTTGTTAGGTCGAAGAGAATGGCG

. : . : . : . : . : . :
JMFF029H04+ GCATCGCGGCGTCTCCGAGATTTACAATCGCAGCCGGGGAACAAGATCTGCGTCGACTGC
JMFF020I14+ GCATCGCGGCGTCTCCGAGATTTACAATCGCAGCCGGGGAACAAGATCTGCGTCGACTGC
JMFF009P16+ GCATCGCGGCGTCTCCGAGATTTACAATCGCAGCCGGGGAACAAGATCTGCGTCGACTGC
JMFF037F16+ GCATCGCGGCGTCTCCGAGATTTACAATCGCAGCCGGGGAACAAGATCTGCGTCGACTGC
JMFF049D09+ GCATCGCGGCGTCTCCGAGATTTACAATCGCAGCCGGGGAACAAGATCTGCGTCGACTGC
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consensus GCATCGCGGCGTCTCCGAGATTTACAATCGCAGCCGGGGAACAAGATCTGCGTCGACTGC

. : . : . : . : . : . :
JMFF029H04+ TCCCAGAAAAACCCTCAATGGGCCTCCGTCTCCTACGGAGTGTTCATGTGCTTGGAGTGC
JMFF020I14+ TCCCAGAAAAACCCTCAATGGGCCTCCGTCTCCTACGGAGTGTTCATGTGCTTGGAGTGC
JMFF009P16+ TCCCAGAAAAACCCTCAATGGGCCTCCGTCTCCTACGGAGTGTTCATGTGCTTGGAGTGC
JMFF037F16+ TCCCAGAAAAACCCTCAATGGGCCTCCGTCTCCTACGGAGTGTTCATGTGCTTGGAGTGC
JMFF049D09+ TCCCAGAAAAACCCTCAATGGGCCTCCGTCTCCTACGGAGTGTTCATGTGCTTGGAGTGC
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consensus TCCCAGAAAAACCCTCAATGGGCCTCCGTCTCCTACGGAGTGTTCATGTGCTTGGAGTGC

. : . : . : . : . : . :
JMFF029H04+ TCCGGCAAGCACCGCGGCCTCGGCGTCCACATCTCCTTCGTCCGATCTGTCACTATGGAC
JMFF020I14+ TCCGGCAAGCACCGCGGCCTCGGCGTCCACATCTCCTTCGTCCGATCTGTCACTATGGAC
JMFF009P16+ TCCGGCAAGCACCGCGGCCTCGGCGTCCACATCTCCTTCGTCCGATCTGTCACTATGGAC
JMFF037F16+ TCCGGCAAGCACCGCGGCCTCGGCGTCCACATCTCCTTCGTCCGATCTGTCACTATGGAC
JMFF049D09+ TCCGGCAAGCACCGCGGCCTCGGCGTCCACATCTCCTTCGTCCGATCTGTCACTATGGAC
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consensus TCCGGCAAGCACCGCGGCCTCGGCGTCCACATCTCCTTCGTCCGATCTGTCACTATGGAC

. : . : . : . : . : . :
JMFF029H04+ TCCTGGTCCGAGATCCAGCTCCGGAAAATGGAGCTTGGGGGAAACGACAACTTCAATTCC
JMFF020I14+ TCCTGGTCCGAGATCCAGCTCCGGAAAATGGAGCTTGGGGGAAACGACAACTTCAATTCC
JMFF009P16+ TCCTGGTCCGAGATCCAGCTCCGGAAAATGGAGCTTGGGGGAAACGACAACTTCAATTCC
JMFF037F16+ TCCTGGTCCGAGATCCAGCTCCGGAAAATGGAGCTTGGGGGAAACGACAACTTCAATTCC
JMFF049D09+ TCCTGGTCCGAGATCCAGCTCCGGAAAATGGAGCTTGGGGGAAACGACAACTTCAATTCC
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consensus TCCTGGTCCGAGATCCAGCTCCGGAAAATGGAGCTTGGGGGAAACGACAACTTCAATTCC

. : . : . : . : . : . :
JMFF029H04+ TTCATCTCCCAGTACGGAGTCCCGAAAGAGACCGATATCGTCACCAAGTACAACACCAAG
JMFF020I14+ TTCATCTCCCAGTACGGAGTCCCGAAAGAGACCGATATCGTCACCAAGTACAACACCAAG
JMFF009P16+ TTCATCTCCCAGTACGGAGTCCCGAAAGAGACCGATATCGTCACCAAGTACAACACCAAG
JMFF037F16+ TTCATCTCCCAGTACGGAGTCCCGAAAGAGACCGATATCGTCACCAAGTACAACACCAAG
JMFF049D09+ TTCATCTCCCAGTACGGAGTCCCGAAAGAGACCGATATCGTCACCAAGTACAACACCAAG
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consensus TTCATCTCCCAGTACGGAGTCCCGAAAGAGACCGATATCGTCACCAAGTACAACACCAAG

. : . : . : . : . : . :
JMFF029H04+ GCAGCATCGGTTTACCGGGACAGGATCCAAGCCCTA
JMFF020I14+ GCAGCATCGGTTTACCGGGACAGGATCCAAGCCCTAGCCGACGGGAAGCCCTGGCGAGAT
JMFF009P16+ GCAGCATCGGTTTACCGGGACAGGATCCAAGCCCTAGCCGACGGGAAGCCCTGGCGAGAT
JMFF037F16+ GCAGCATCGGTTTACCGGGACAGGATCCAAGCCCTAGCCGACGGGAAGCCCTGGCGAGAT
JMFF049D09+ GCAGCATCGGTTTACCGGGACAGGATCCAAGCCCTAGCCGACGGGAAGCCCTGGCGAGAT
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consensus GCAGCATCGGTTTACCGGGACAGGATCCAAGCCCTAGCCGACGGGAAGCCCTGGCGAGAT

. : . : . : . : . : . :
JMFF020I14+ CCACCAGTGGTCAAGGAAACGCTCAAGGGCGGCGCC
JMFF009P16+ CCACCAGTGGTCA
JMFF037F16+ CCACCAGTGGTCA
JMFF049D09+ CCACCAGTGGTCAAGGAAACGCTCAAGGGCGGCGCCGGTAGTAACAGTAGTAAGCCGCCC
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consensus CCACCAGTGGTCAAGGAAACGCTCAAGGGCGGCGCCGGTAGTAACAGTAGTAAGCCGCCC

. : . : . : . : . : . :
JMFF049D09+ TTGAGCGGTGGTGGGGGTAGGAATGGGAACGTTGGTGGGAATTCGAGTTGGGACAGTTGG
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consensus TTGAGCGGTGGTGGGGGTAGGAATGGGAACGTTGGTGGGAATTCGAGTTGGGACAGTTGG

. : . : . : . : . : . :
JMFF049D09+ GACGACGATGGAGGGTTTAATAACGGGAATCATNAGCATAATAATATTCG
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consensus GACGACGATGGAGGGTTTAATAACGGGAATCATNAGCATAATAATATTCG