Alignment Contig 1633

                          .    :    .    :    .    :    .    :    .    :    .    :

JMFF015L08+ GCTAAGTCGGAAAATCTAAGTTAACCCAAAAAAAATCATATAAAATCTAAAACCGTTGCT
JMFF036H11+ GCTAAGTCGGAAAATCTAAGTTAACCCAAAAAAAATCATATAAAATCTAAAACCGTTGCT
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consensus GCTAAGTCGGAAAATCTAAGTTAACCCAAAAAAAATCATATAAAATCTAAAACCGTTGCT

. : . : . : . : . : . :
JMFF015L08+ TTCTCACTCAGTACGTACTATACTTTACATGCTTGACAATGTTGTGTGCCACTCGGCCTT
JMFF036H11+ TTCTCACTCAGTACGTACTATACTTTACATGCTTGACAATGTTGTGTGCCACTCGGCCTT
JMSF018H13+ ACTCGGCCTT
JMSF046A09+ ACTCGGCCTT
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consensus TTCTCACTCAGTACGTACTATACTTTACATGCTTGACAATGTTGTGTGCCACTCGGCCTT

. : . : . : . : . : . :
JMFF015L08+ GTTATCAACATCGCACCCATCGGCTCTCTCTCTCTCTCCCTGAGCAAAAGACAATCACTT
JMSF026M11+ AACATCGCACCCATCGGCTCTCTCTCNCTCTCCCTGAGCAAAAGACAATCACTT
JMFF036H11+ GTTATCAACATCGCACCCATCGGCTCTCTCTCTCTCTCCCTGAGCAAAAGACAATCACTT
JMSF018H13+ GTTATCAACATCGCACCCATCGGCTCTCTCTCTCTCTCCCTGAGCAAAAGACAATCACTT
JMSF046A09+ GTTATCAACATCGCACCCATCGGCTCTCTCTCTCTCTCCCTGAGCAAAAGACAATCACTT
____________________________________________________________
consensus GTTATCAACATCGCACCCATCGGCTCTCTCTCTCTCTCCCTGAGCAAAAGACAATCACTT

. : . : . : . : . : . :
JMFF015L08+ GCGGTCAAATTTCTGCATTGATAGATTCTCCATTTTCCTGCTATTAGCATCTGAATCTCA
JMSF026M11+ GCGGTCAAATTTCTGCATTGATAGATTCTCCATTTTCCTGCTATNAGNATCTGAATCACA
JMFF048K24+ ATTGATAGATTCTCCATTTTCCTGCTATTAGCATCTGAATCTCA
JMFF036H11+ GCGGTCAAATTTCTGCATTGATAGATTCTCCATTTTCCTGCTATTAGCATCTGAATCTCA
JMSF018H13+ GCGGTCAAATTTCTGCATTGATAGATTCTCCATTTTCCTGCTATTAGCATCTGAATCTCA
JMSF046A09+ GCGGTCAAATTTCTGCATTGATAGATTCTCCATTTTCCTGCTATTAGCATCTGAATCTCA
JMSF048I21+ ATTGATAGATTCTCCATTTTCCTGCTATTAGCATCTGAATCTCA
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consensus GCGGTCAAATTTCTGCATTGATAGATTCTCCATTTTCCTGCTATTAGCATCTGAATCTCA

. : . : . : . : . : . :
JMFF015L08+ AGAATCAACCCTTTTTCCATTGTCTTCTTCATTTCACTTCCATTTTCACTTTCTGAATTC
JMSF026M11+ AGAATCANCCCTTTTTCCATTGTCTTCTTCATTTCACTTCCATTTTCACTTTCTGAATTC
JMFF048K24+ AGAATCAACCCTTTTTCCATTGTCTTCTTCATTTCACTTCCATTTTCACTATCTGAATTC
JMFF036H11+ AGAATCAACCCTTTTTCCATTGTCTTCTTCATTTCACTTCCATTTTCACTTTCTGAATTC
JMSF018H13+ AGAATCAACCCTTTTTCCATTGTCTTCTTCATTTCACTTCCATTTTCACTTTCTGAATTC
JMSF046A09+ AGAATCAACCCTTTTTCCATTGTCTTCTTCATTTCACTTCCATTTTCACTTTCTGAATTC
JMSF048I21+ AGAATCAACCCTTTTTCCATTGTCTTCTTCATTTCACTTCCATTTTCACTTTCTGAATTC
____________________________________________________________
consensus AGAATCAACCCTTTTTCCATTGTCTTCTTCATTTCACTTCCATTTTCACTTTCTGAATTC

. : . : . : . : . : . :
JMFF015L08+ TTTATTTATGCTATCTTCCACTGTTTGCCGCAGTTCGTTCGCACTGAATATATCTTTGCT
JMSF026M11+ TTTATTTATGCTATCTTCCACTGTTTGCCGCA
JMFF048K24+ TTTATTTATGCTATCTTCCACTGTTTGCCGCAGTTCGTTCGCACTGAATATATCTTTGCT
JMFF036H11+ TTTATTTATGCTATCTTCCACTGTTTGCCGCAGTTCGTTCGCACTGAATATATCTTTGCT
JMSF018H13+ TTTATTTATGCTATCTTCCACTGTTTGCCGCAGTTCGTTCGCACTGAATATATCTTTGCT
JMSF046A09+ TTTATTTATGCTATCTTCCACTGTTTGCCGCAGTTCGTTCGCACTGAATATATCTTTGCT
JMSF048I21+ TTTATTTATGCTATCTTCCACTGTTTGCCGCAGTTCGTTCGCACTGAATATATCTTTGCT
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consensus TTTATTTATGCTATCTTCCACTGTTTGCCGCAGTTCGTTCGCACTGAATATATCTTTGCT

. : . : . : . : . : . :
JMFF015L08+ TGGACTTTTTCCCTTGGAGCTTATACATTACCTTTACACATTTCAATCACTCTTCTTTCC
JMFF048K24+ TGGACTTTTTCCCTTGGAGCTTATACATTACCTTTACACATTTCAATCACTCTTCTTTCC
JMFF036H11+ TGGACTTTTTCCCTTGGAGCTTATACATTACCTTTACACATTTCAATCACTCTTCTTTCC
JMSF018H13+ TGGACTTTTTCCCTTGGAGCTTATACATTACCTTTACACATTTCAATCACTCTTCTTTCC
JMSF046A09+ TGGACTTTTTCCCTTGGAGCTTATACATTACCTTTACACATTTCAATCACTCTTCTTTCC
JMSF048I21+ TGGACTTTTTCCCTTGGAGCTTATACATTACCTTTACACATTTCAATCACTCTTCTTTCC
____________________________________________________________
consensus TGGACTTTTTCCCTTGGAGCTTATACATTACCTTTACACATTTCAATCACTCTTCTTTCC

. : . : . : . : . : . :
JMFF015L08+ ATGCATTTATGCTTTTTTTCTTTTAACCGCACATTCTTTCATTTGATTACAAACCCACCA
JMFF048K24+ ATGCATTTATGCTTTTTTTCTTTTAACCGCACATTCTTTCATTTGATTACAAACCCACCA
JMFF036H11+ ATGCATTTATGCTTTTTTTCTTTTAACCGCACATTCTTTCATTTGATTACAAACCCACCA
JMSF018H13+ ATGCATTTATGCTTTTTTTCTTTTAACCGCACATTCTTTCATTTGATTACAAACCCACCA
JMSF046A09+ ATGCATTTATGCTTTTTTTCTTTTAACCGCACATTCTTTCATTTGATTACAAACCCACCA
JMSF048I21+ ATGCATTTATGCTTTTTTTCTTTTAACCGCACATTCTTTCATTTGATTACAAACCCACCA
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consensus ATGCATTTATGCTTTTTTTCTTTTAACCGCACATTCTTTCATTTGATTACAAACCCACCA

. : . : . : . : . : . :
JMFF015L08+ ATAAACCGAGAAAAAAATTCCAACTTTCTGTCATTTTCTTTCGAGACTCATACGCCTAAC
JMFF048K24+ ATAAACCGAGAAAAAAATTCCAACTTTCTGTCATTTTCTTTCGAGACTCATACGCCTAAC
JMFF036H11+ ATAAACCGAGAAAAAAATTCCAACTTTCTGTCATTTTCTTTCGAGACTCATACGCCTAAC
JMSF018H13+ ATAAACCGAGAAAAAAATTCCAACTTTCTGTCATTTTCTTTCGAGACTCATACGCCTAAC
JMSF046A09+ ATAAACCGAGAAAAAAATTCCAACTTTCTGTCATTTTCTTTCGAGACTCATACGCCTAAC
JMSF048I21+ ATAAACCGAGAAAAAAATTCCAACTTTCTGTCATTTTCTTTCGAGACTCATACGCCTAAC
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consensus ATAAACCGAGAAAAAAATTCCAACTTTCTGTCATTTTCTTTCGAGACTCATACGCCTAAC

. : . : . : . : . : . :
JMFF015L08+ AAGTATTCTTCTCTGACAAAGCCCTGAACAAAATTATGTCTCCATTTTTCCAAACAATAT
JMFF048K24+ AAGTATTCTTCTCTGACAAAGCCCTGAACAAAATTATGTCTCCATTTTTCCAAACAATAT
JMFF036H11+ AAGTATTCTTCTCTGACAAAGCCCTGAACAAAATTATGTCTCCATTTTTCCAAACAATAT
JMSF018H13+ AAGTATTCTTCTCTGACAAAGCCCTGAACAAAATTATGTCTCCATTTTTCCAAACAATAT
JMSF046A09+ AAGTATTCTTCTCTGACAAAGCCCTGAACAAAATTATGTCTCCATTTTTCCAAACAATAT
JMSF048I21+ AAGTATTCTTCTCTGACAAAGCCCTGAACAAAATTATGTCTCCATTTTTCCAAACAATAT
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consensus AAGTATTCTTCTCTGACAAAGCCCTGAACAAAATTATGTCTCCATTTTTCCAAACAATAT

. : . : . : . : . : . :
JMFF015L08+ CCCTCTGGTC
JMFF048K24+ CCCTCTG
JMFF036H11+ CCCTCTGGTCA
JMSF018H13+ CCCTCTGGTCAATGGCGGTGGTGTTTCTGTTACGCTCGGCGGCGGCGGCGGGCGAGTGGG
JMSF046A09+ CCCTCTGGTCAATGGCGGTGGTGTTTCTGTTACGCTCGGCGGCGGCGGCGGGCGAGTGGG
JMSF048I21+ CCCTCTGGTCAATGGCGGTGGTGTTTCTGTTACGCTCGGCGGCGGCGGCGGGCGAGTGGG
____________________________________________________________
consensus CCCTCTGGTCAATGGCGGTGGTGTTTCTGTTACGCTCGGCGGCGGCGGCGGGCGAGTGGG

. : . : . : . : . : . :
JMSF018H13+ AAACATGCTCGTGGAT
JMSF046A09+ AAACATGCTCGTGGATAGTTCCGATGAGTTACCGGAATGACAAGATATCGATAAAGGACT
JMSF048I21+ AAACATGCTCGTGGATAGTTCCGATGAGTTACCGGAATGACAAGATATCGATAAAGGACT
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consensus AAACATGCTCGTGGATAGTTCCGATGAGTTACCGGAATGACAAGATATCGATAAAGGACT

. : . : . : . : . : . :
JMSF046A09+ TTGGGGGCGTCGGAGATGGGCGCACCCTAAATACTAATGCTTTCAGGGAAGCAATTTATC
JMSF048I21+ TTGGGGGCGTCGGAGATGGGCGCACCCTAAATACTAATGCTTTCAGGGAAGCAATTTATC
____________________________________________________________
consensus TTGGGGGCGTCGGAGATGGGCGCACCCTAAATACTAATGCTTTCAGGGAAGCAATTTATC

. : . : . : . : . : . :
JMSF046A09+ GAATAGAGCATTTGAG
JMSF048I21+ GAATAGAGCATTTGAGGAGGAGAGGTGGCACTCTTCTTTACATTCCTCCTGGGGTGTATT
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consensus GAATAGAGCATTTGAGGAGGAGAGGTGGCACTCTTCTTTACATTCCTCCTGGGGTGTATT

. : . : . : . : . : . :
JMSF048I21+ TAACTGGACCTTTCAATCTCACCAGTCACATGACTCTGTATTTGGCCAGGGGTGCTGNTA
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consensus TAACTGGACCTTTCAATCTCACCAGTCACATGACTCTGTATTTGGCCAGGGGTGCTGNTA

. : . : . : . : . : . :
JMSF048I21+ T
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consensus T