Alignment Contig 163

                          .    :    .    :    .    :    .    :    .    :    .    :

JMFF029B20+ TATCATCAAATCATCAATATACATGCATGCATAATATAATATAATGGCTGCACTTCTCGC
JMFF007P02+ TTCTCGC
JMSF053G13+ TTCTCGC
JMSF031H07+ TTCTCGC
JMSF004P10+ TTCTCGC
JMSF019M15+ TTCTCGC
____________________________________________________________
consensus TATCATCAAATCATCAATATACATGCATGCATAATATAATATAATGGCTGCACTTCTCGC

. : . : . : . : . : . :
JMFF029B20+ TCCAACCTCCTTTCTCTTCATACTCTTCTTATGTCTCCTTTCAGTCTGCAGGGTTTCGGT
JMFF007P02+ TCCAACCTCCTTTCTCTTCATACTCTTCTTATGTCTCCTTTCAGTCTGCAGGGTTTCGGT
JMSF053G13+ TCCAAGTTCCTTTCTCTTCATATTCATCTTATGTCTCCTTTCAGTCTGCAGGGTTTCGGT
JMSF031H07+ TCCAAGTTCCTTTCTCTTCATATTCATCTTATGTCTCCTTTCAGTCTGCAGGGTTTCGGT
JMSF004P10+ TCCAAGTTCCTTTCTCTTCATATTCATCTTATGTCTCCTTTCAGTCTGCAGGGTTTCGGT
JMSF019M15+ TCCAACCTCCTTTCTCTTCATACTCTTCTTATGTCTCCTTTCAGTCTGCAGGGTTTCGGT
JMSF022M16+ ATGTCTCCTTTCAGTCTGCAGGGTTTCGGT
____________________________________________________________
consensus TCCAACCTCCTTTCTCTTCATACTCATCTTATGTCTCCTTTCAGTCTGCAGGGTTTCGGT

. : . : . : . : . : . :
JMFF029B20+ TTCTTCATTGGAGGAACCCAAGAGCTTCATCGTTTTCATGTCGAAATTTGAGAAGCCTCA
JMFF007P02+ TTCTTCATTGGAGGAACCCAAGAGCTTCATCGTTTTCATGTCGAAATTTGAGAAGCCTCA
JMSF053G13+ TTCTTCATTGGAGGAACCCAAGAGCTTCATCGTTTTCATGATGAAATCTGAGAAGCCTCA
JMSF031H07+ TTCTTCATTGGAGGAACCCAAGAGCTTCATCGTTTTCATGATGAAATCTGAGAAGCCTCA
JMSF004P10+ TTCTTCATTGGAGGAACCCAAGAGCTTCATCGTTTTCATGATGAAATCTGAGAAGCCTCA
JMSF019M15+ TTCTTCATTGGAGGAACCCAAGAGCTTCATCGTTTTCATGTCGAAATTTGAGAAGCCTCA
JMSF022M16+ TTCTTCATTGGAGGAACCCAAGAGCTTCATCGTTTTCATGTCGAAATTTGAGAAGCCTCA
____________________________________________________________
consensus TTCTTCATTGGAGGAACCCAAGAGCTTCATCGTTTTCATGTCGAAATTTGAGAAGCCTCA

. : . : . : . : . : . :
JMFF029B20+ GCTTTTCTCTACCCATCATGACTGGTATTCATCCATTATCCATACACTCTCTCCTCTCTC
JMFF007P02+ GCTTTTCTCTACCCATCATGACTGGTATTCATCCATTATCCATACACTCTCTCCTCTCTC
JMSF053G13+ GCTTTTCTCTACCCATCATGACTGGTATTCATCCATCATCCATACCCTTTCTCCTCTCTC
JMSF031H07+ GCTTTTCTCTACCCATCATGACTGGTATTCATCCATCATCCATACCCTTTCTCCTCTCTC
JMSF004P10+ GCTTTTCTCTACCCATCATGACTGGTATTCATCCATCATCCATACCCTTTCTCCTCTCTC
JMSF019M15+ GCTTTTCTCTACCCATCATGACTGGTATTCATCCATTATCCATACACTCTCTCCTCTCTC
JMSF022M16+ GCTTTTCTCTACCCATCATGACTGGTATTCATCCATTATCCATACACTCTCTCCTCTCTC
____________________________________________________________
consensus GCTTTTCTCTACCCATCATGACTGGTATTCATCCATTATCCATACACTCTCTCCTCTCTC

. : . : . : . : . : . :
JMFF029B20+ TAACCACTCAAGATCATCCGAGCTCTTGTACACCTATGAACATGTTGCCCATGGTTTTTC
JMFF007P02+ TAACCACTCAAGATCATCCGAGCTCTTGTACACCTATGAACATGTTGCCCATGGTTTTTC
JMSF053G13+ TAACCACTCAAGATCATCTGAGCTCTTGTACACCTATGAACATGTTGCGCATGGTTTTTC
JMSF031H07+ TAACCACTCAAGATCATCTGAGCTCTTGTACACCTATGAACATGTTGCGCATGGTTTTTC
JMSF004P10+ TAACCACTCAAGATCATCTGAGCTCTTGTACACCTATGAACATGTTGCGCATGG
JMSF019M15+ TAACCACTCAAGATCATCCGAGCTCTTGTACACCTATGAACATGTTGCCCATGGTTTTTC
JMSF022M16+ TAACCACTCAAGATCATCCGAGCTCTTGTACACCTATGAACATGTTGCCCATGGTTTTTC
____________________________________________________________
consensus TAACCACTCAAGATCATCCGAGCTCTTGTACACCTATGAACATGTTGCCCATGGTTTTTC

. : . : . : . : . : . :
JMFF029B20+ TGCAAGCCTGACTCCTTCCCAAGCGTCTGAACTAGAAAACGTTCCGGGTGTGATCTCTGT
JMFF007P02+ TGCAAGCCTGACTCCTTCCCAAGCGTCTGAACTAGAAAACGTTCCGGGTGTGATCTCTGT
JMSF053G13+ TGCACGCCTCACTCCCTCCCAAGCGTCTGAACTAGCAAACGTTCCGGGAGTGATCTCTGT
JMSF031H07+ TGCACGCCTCACTCCCTCCCAAGCGTCTGAACTAGCAAACGTTCCGGGAGTGATCTCTGT
JMSF019M15+ TGCAAGCCTGACTCCTTCCCAAGCGTCTGAACTAGAAAACGTTCCGGGTGTGATCTCTGT
JMSF022M16+ TGCAAGCCTGACTCCTTCCCAAGCGTCTGAACTAGAAAACGTTCCGGGTGTGATCTCTGT
____________________________________________________________
consensus TGCAAGCCTGACTCCTTCCCAAGCGTCTGAACTAGAAAACGTTCCGGGTGTGATCTCTGT

. : . : . : . : . : . :
JMFF029B20+ CCTTCGGGATGACCTCCTCGAGCTCCAAACCACTAGGACTCCTCAATTCT
JMFF007P02+ CCTTCGGGATGACCTCCTCGAGCTCCAAACCACTAGGACTCCTCAATTCTTAGGCTTAAG
JMSF053G13+ CCTTCCGGATCGCCTCGTCGAGCTCCAGACCACTAGGTCTCCTCAATTCTTAGGCTTAA
JMSF031H07+ CCTTCCGGATCGCCTCGTCGAGCTCCAGACCACTAGGTCTCCTCAATTCTTAGGCTTAA
JMSF019M15+ CCTTCGGGATGACCTCCTCGAGCTCCAAACCACTAGGACTCCTCAATTCTTAGGCTTAA
JMSF022M16+ CCTTCGGGATGACCTCCTCGAGCTCCAAACCACTAGGACTCCTCAATTCTTAGGCTTAAG
____________________________________________________________
consensus CCTTCGGGATGACCTCCTCGAGCTCCAAACCACTAGGACTCCTCAATTCTTAGGCTTAAG

. : . : . : . : . : . :
JMFF007P02+ TAGTTCTGCCGCATCTAGTCTCTGGCCTAGCTCTGATTACGGAGCTGAAATTATAGTCGG
JMSF022M16+ TAGTTCTGCCGCATCTAGTCTCTGGCCTAGCTCTGATTACGGAGCTGAAATTATAGTCGG
____________________________________________________________
consensus TAGTTCTGCCGCATCTAGTCTCTGGCCTAGCTCTGATTACGGAGCTGAAATTATAGTCGG

. : . : . : . : . : . :
JMFF007P02+ TGTTCTGGACAGTGGAAT--GGCCCCAAAGGTCTAGCTTCTCCGACCAGGGTCTATCCCC
JMSF022M16+ TGTTCTGGACAGTGGAATCTGGCCCCAAAGGTCTAGCTTCTCCGACCAGGGTCTATCCCC
____________________________________________________________
consensus TGTTCTGGACAGTGGAATCTGGCCCCAAAGGTCTAGCTTCTCCGACCAGGGTCTATCCCC

. : . : . : . : . : . :
JMFF007P02+ CGTTCCTAACGACTGGAGGAACAAGTGCGAGGT
JMSF022M16+ CGTTCCTAACGACTGGAGGAACAAGTGCGAGGTTGGTCCACAGTTTCCGGCGACTTCGTG
____________________________________________________________
consensus CGTTCCTAACGACTGGAGGAACAAGTGCGAGGTTGGTCCACAGTTTCCGGCGACTTCGTG

. : . : . : . : . : . :
JMSF022M16+ TAATCGGAAAATCATTGGTGCTCGTGCTTATTACAGAGGTTACGAAGCTGTTACTGGAAG
____________________________________________________________
consensus TAATCGGAAAATCATTGGTGCTCGTGCTTATTACAGAGGTTACGAAGCTGTTACTGGAAG

. : . : . : . : . : . :
JMSF022M16+ GCCAATAGTTGATGAACCTAAATCAGCGATAGATATGACCGGGCATGGCACACATGTTGC
____________________________________________________________
consensus GCCAATAGTTGATGAACCTAAATCAGCGATAGATATGACCGGGCATGGCACACATGTTGC

. : . : . : . : . : . :
JMSF022M16+ CTCTACTGCAGCTGGATCTGCTGTTGCGAACGCTAACCTTTTCG
____________________________________________________________
consensus CTCTACTGCAGCTGGATCTGCTGTTGCGAACGCTAACCTTTTCG