Alignment Contig 1534

                          .    :    .    :    .    :    .    :    .    :    .    :

rJMCP004G02+ TTCAACACTGACAACAACAACAACTACTACTACACCAACAACCGAGAAGAAACCTTCCCC
rJMSF046F10- ACAACAACAANTANTTCTTCACCAACAACCGNGAAGNAACCTTCCCC
JMCP002C02+ TTCAACACTGACAACAACAACAACTACTACTACACCAACAACCGAGAAGAAACCTTCCCC
rJMCP007E08+ TTCAACACTGACAACAACAACAACTACTACTACACCAACAACCGAGAAGAAACCTTCCCC
JMCP020E10+ TTCAACACTGACAACAACAACAACTACTACTACACCAACAACCGAGAAGAAACCTTCCCC
JMCP005C08+ TTCAACACTGACAACAACAACAACTACTACTACACCAACAACCGAGAAGAAACCTTCCCC
JMCP010D07+ TTCAACACTGACAACAACAACAACTACTACTACACCAACAACCGAGAAGAAACCTTCCCC
JMCP010D06+ TTCAACACTGACAACAACAACAACTACTACTACACCAACAACCGAGAAGAAACCTTCCCC
rJMCP009B02+ TTCAACACTGACAACAACAACAACTACTACTACACCAACAACCGAGAAGGAACCTTCCCC
rJMCP008D07+ TTCAACACTGACAACAACAACAACTACTACTACACCAACAACCGAGAAGAAACCTTCCCC
rJMCP007F07+ TTCAACACTGACAACAACAACAACTACTACTACACCAACAACCGAGAAGAAACCTTCCCC
JMCP004E10+ CAACAACCGAGAAGAAACCTTCCCC
JMCP018G11+ TTCAACACTGACAACAACAACAACTACTACTACACCAACAACCGAGAAGAAACCTTCCCC
JMCP009B09+ TTCAACACTGACAACAACAACAACTACTACTACACCAACAACCGAGAAGAAACCTTCCCC
JMCP007H09+ TTCAACACTGACAACAACAACAACTACTACTACACCAACAACCGAGAAGAAACCTTCCCC
JMCP003A04+ TTCAACACTGACAACAACAACAACTACTACTACACCAACAACCGAGAAGAAACCTTCCCC
JMCP003H05+ TTCAACACTGACAACAACAACAACTACTACTACACCAACAACCGAGAAGAAACCTTCCCC
____________________________________________________________
consensus TTCAACACTGACAACAACAACAACTACTACTACACCAACAACCGAGAAGAAACCTTCCCC

. : . : . : . : . : . :
rJMCP004G02+ ACCACCACCACCGGCGGCGGCGGCGGCAACCGCTACAACTACAACAACGGCGGCGCTGCA
rJMSF046F10- NCCNCCNCCNCCGGNGGNGGNGGNGGCAACCGNTNCAAATACAACAACGGNGGCGNTGCA
JMCP002C02+ ACCACCACCACCGGCGGCGGCGGCGGCAACCGCTACAACTACAACAACGGCGGCGCTGCA
rJMCP007E08+ ACCACCACCACCGGCGGCGGCGGCGGCAACCGCTACAACTACAACAACGGCGGCGCTGCA
JMCP020E10+ ACCACCACCACCGGCGGCGGCGGCGGCAACCGCTACAACTACAACAACGGCGGCGCTGCA
JMCP005C08+ ACCACCACCACCGGCGGCGGCGGCGGCAACCGCTACAACTACAACAACGGCGGCGCTGCA
JMCP010D07+ ACCACCACCACCGGCGGCGGCGGCGGCAACCGCTACAACTACAACAACGGCGGCGCTGCA
JMCP010D06+ ACCACCACCACCGGCGGCGGCGGCGGCAACCGCTACAACTACAACAACGGCGGCGCTGCA
rJMCP009B02+ ACCACCACCACCGGCGGCGGCGGCGGCAACCGCTACAACTACAACAACGGCGGCGCTGCA
rJMCP008D07+ ACCACCACCACCGGCGGCGGCGG---CAACCGCTACAACTACAACAACGGCGGCGCTGCA
rJMFF025H01- GGCAACCGNTACAANTACAACAACGGNGGNGNTGCA
rJMFF049F20- ACAACAACGGCGGCGCTGCA
rJMCP007F07+ ACCACCACCACCGGCGGCGGCGGCGGCAACCGCTACAACTACAACAACGGCGGCGCTGCA
JMCP004E10+ ACCACCACCACCGGCGGCGGCGGCGGCAACCGCTACAACTACAACAACGGCGGCGCTGCA
JMFF003B22+ GGCGGCAACCGCTACAACTACAACAACGGCGGCGCTGCA
JMCP018G11+ ACCACCACCACCGGCGGCGGCGGCGGCAACCGCTACAACTACAACAACGGCGGCGCTGCA
JMCP009B09+ ACCACCACCACCGGCGGCGGCGGCGGCAACCGCTACAACTACAACAACGGCGGCGCTGCA
JMCP007H09+ ACCACCACCACCGGCGGCGGCGGCGGCAACCGCTACAACTACAACAACGGCGGCGctgCA
rJMSF023A06- GGCGGCAACCGCTACAACTACAACAACGGCGGCGCTGCA
JMFS100F01+ CGGCGGCAACCGCTACAACTACAACAACGGCGGCGCTGCA
JMCP003A04+ ACCACCACCACCGGCGGCGGCGG---CAACCGCTACAACTACAACAACGGCGGCGCTGCA
JMCP003H05+ ACCACCACCACCGGCGGCGGCGGCGGCAACCGCTACAACTACAACAACGGCGGCGCTGCA
rJMSF046E16- CGGCAACCGCTACAACTACAACAACGGNGGCGCTGCA
____________________________________________________________
consensus ACCACCACCACCGGCGGCGGCGGCGGCAACCGCTACAACTACAACAACGGCGGCGCTGCA

. : . : . : . : . : . :
rJMCP004G02+ AACAGGTTTGAGCAGCAAGGGATGAGCGACACAAGATTCATGGAAA-ATGGGAGGTATTA
rJMSF046F10- AACNGGTTTGAGCNGCNAGGGNTGAGCGNCCCNAGATTCNTGGAAA-ATGGGNGGNATTA
JMCP002C02+ AACAGGTTTGAGCAGCaagGGATGAGCGACACAAGATTCATGGAAA-ATGGGAGGTATTA
rJMCP007E08+ AACAGGTTTGAGCAGCAAGGGATGAGCGACACAAGATTCATGGAAA-ATGGGAGGTATTA
JMCP020E10+ AACAGGTTTGAGCAGCAAGGGATGAGCGACACAAGATTCATGGAAA-ATGGGAGGTATTA
JMCP005C08+ AACAGGTTTGAGCAGCAAGGGATGAGCGACACAAGATTCATGGAAA-ATGGGAGGTATTA
JMCP010D07+ AACAGGTTTGAgcagcaagggatgaacgacacaagattcatggaaataggaggtatatca
JMCP010D06+ AACAGGTTTGAGCAGCAAGGGATGAGCGACACAAGATTCATGGAAA-ATGGGAGGTATTA
rJMCP009B02+ AACAGGTTTGAGCAGCAAGGGATGAGCGACACAAGATTCATGGAAA-ATGGGAGGTATTA
rJMCP008D07+ AACAGGTTTGAGCAGCAAGGGATGAGCGACACAAGATTCATGGAAA-ATGGGAGGTATTA
rJMFF025H01- AACAGGTTTGAGCAGCAAGGGATGAGNGACNCAAGATTCATGGAAA-ATGGGNGGTNTTT
rJMFF049F20- AACAGGTTTGAGCAGCAAGGGATGAGCGACACAAGATTCATGGAAA-ATGGGAGGTATTA
rJMCP007F07+ AACAGGTTTGAGCAGCAAGGGATGAGCGACACAAGATTCATGGAAA-ATGGGAGGTATTA
JMCP004E10+ AACAGGTTTGAGCAGCAAGGGATGAGCGACACAAGATTCATGGAAA-ATGGGAGGTATTA
JMFF003B22+ AACAGGTTTGAGCAGCAAGGGATGAGCGACACAAGATTCATGGAAA-ATGGGAGGTATTA
JMCP018G11+ AACAGGTTTGAGCAGCAAGGGATGAGCGACACAAGATTCATGGAAA-ATGGGAGGTATTA
JMCP009B09+ AACAGGTTTGAGCAGCAAGGGATGAGCGACACAAGATTCATGGAaa-aTGGGAGGTATTA
JMCP007H09+ AACAGGTTTGAGCAGCAAGGGATGAGCGACACAAGATTCATGGAAA-ATGGGAGGTATTA
rJMSF023A06- AACAGGTTTGAGCAGCAAGGGATGAGCGACNCNAGATTCATGGAAA-ATGGGAGGTATTA
JMFS100F01+ AACAGGTTTGAGCAGCAAGGGATGAGCGACACAAGATTCATGGAAA-ATGGGAGGTATTA
JMCP003A04+ AACAGGTTTGAGCAGCAAGGGATGAGCGACACAAGATTCATGGAAA-ATGGGAGGTATTA
JMCP003H05+ AACAGGTTTGAGCAGCAAGGGATGAGCGACACAAGATTCATGGAAA-ATGGGAGGTATTA
rJMSF046E16- AACNGGTTTGAGCNGCNAGGGATGAGCGACCCNAGATTCNTGGAAA-ATGGGNGGTNTTA
____________________________________________________________
consensus AACAGGTTTGAGCAGCAAGGGATGAGCGACACAAGATTCATGGAAA-ATGGGAGGTATTA

. : . : . : . : . : . :
rJMCP004G02+ CTATGATGTCAACACAGAGAAGTACGCCAGACATCCATACGAGAATTCAAGAAACCAGTT
rJMSF046F10- CTNTGATGTCAACNCNGNGAAGTNCGCCNGACNTCCNTNCGNGAATTCAAGAAACCNGTT
JMCP002C02+ CTATGATGTCAACACAGAGAAGTACGCCAGACATCCGTACGAGAATTCAAGAAACCAGTT
rJMCP007E08+ CTATGATGTCAACACAGAGAAGTACGCCAGACATCCATACGAGAATTCAAGAAACCAGTT
JMCP020E10+ CTATGATGTCAACACAGAGAAGTACGCCAGACATCCATACGAGAATTCAAGAAACCAGTT
JMCP005C08+ CTATGATGTCAACACAGAGAAGTACGCCAGACATCCATACGAGAATTCAAGAAACCAGTT
JMCP010D07+ atatgatgtcaacacagagaagtacgccagacATCCatacaagaatTCAAGAAACCAGTT
JMCP010D06+ CTATGATGTCAACACAGAGAAGTACGCCAGACATCCATACGAGAATTCAAGAAACCAGTT
rJMCP009B02+ CTATGATGTCAACACAGAGAAGTACGCCAGACATCCATACGAGAATTCAAGAAACCAGTT
rJMCP008D07+ CTATGATGTCAACACAGAGAAGTACGCCAGACATCCATACGAGAATTCAAGAAACCAGTT
rJMFF025H01- NTNTGATGTCAACCCAGAGAAGTNCNCCAGACATCCATNCGNGAATTCAAGAAACCAGTT
rJMFF049F20- CTATGATGTCAACACAGAGAAGTACGCCAGACATCCATACGAGAATTCAAGAAACCAGTT
rJMCP007F07+ CTATGATGTCAACACAGAGAAGTACGCCAGACATCCATACGAGAATTCAAGAAACCAGTT
JMCP004E10+ CTATGATGTCAACACAGAGAAGTACGCCAGACATCCATACGAgaATTCAAGAAACCAGTT
JMFF003B22+ CTATGATGTCAACACAGAGAAGTACGCCAGACATCCATACGAGAATTCAAGAAACCAGTT
JMCP018G11+ CTATGATGTCAACACAGAGAAGTACGCCAGACATCCATACGAGAATTCAAGAAACCAGTT
JMCP009B09+ CTATGATGTCAACACAGAGAAGTACGCCAGACATCCATACGAGAATTCAAGAAACCAGTT
JMCP007H09+ CTATGATGTCAACACAGAGAAGTACGCCAgaCATCCATACGAGAATTCAAGAAACCAGTT
rJMSF023A06- CTATGATGTCAACNCAGAGAAGTACGCCNGACATCCATNCGNGAATTCAAGAAACCAGTT
JMFS100F01+ CTATGATGTCAACACAGAGAAGTACGCCAGACATCCATACGAGAATTCAAGAAACCAGTT
JMCP003A04+ CTATGATGTCAACACAGAGAAGTACGCCAGACATCCATACGAGAATTCAAGAAACCAGTT
JMCP003H05+ CTATGATGTCAACACAGAGAAGTACGCCAGACATCCATACGAGAATTCAAGAAACCAGTT
rJMSF046E16- CTATGATGTCNACCCNGNGAAGTACNCCNGACNTCCNTNCGNGAATTCAAGAAACCNGTT
____________________________________________________________
consensus CTATGATGTCAACACAGAGAAGTACGCCAGACATCCATACGAGAATTCAAGAAACCAGTT

. : . : . : . : . : . :
rJMCP004G02+ CAACAACAATGGAGGATTCGACAACAACAACAACAACAACAATGGATTCATGGAGAACAA
rJMSF046F10- CAACAACNATGGNGGNTTNGGCAACAACAACAACAACNACAATGGNTTCNTGGNGAACNA
JMCP002C02+ CAACAACAATGGAGGATTCGACAACAACAACAACAACAACAATGGATTCATGGAGAACAA
rJMCP007E08+ CAACAACAATGGAGGATTCGACAACAACAACAACAACAACAATGGATTCATGGAGAACAA
JMCP020E10+ CAACAACAATGGAGGATTCGACAACAACAACAACAACAACAATGGATTCATGGAGAACAA
JMCP005C08+ CAACAACAATGGAGGATTCGACAACAACAACAACAACAACAATGGATTCATGGAGAACAA
JMCP010D07+ CAACAACAATGGAGGATTCGACAACAACAACAACAACAACAATGGATTCATGGAGAACAA
JMCP010D06+ CAACAACAATGGAGGATTCGACAACAACAACAACAACAACAATGGATTCATGGAGAACAA
rJMCP009B02+ CAACAACAGTGGAGGATTCGACAACAACAACAACAACAACAATGGATTCATGGAGAACAA
rJMCP008D07+ CAACAACAATGGAGGATTCGACAACAACAACAACAACAACAATGGATTCATGGAGAACAA
rJMFF025H01- CAACAACAATGGNGGNTTTGNCAACAACAACAACAACAACAATGGATTCATGGNGAACAA
rJMFF049F20- CAACAACAATGGAGGATTCGACAACAACAACAACAACAACAATGGATTCATGGAGAACAA
rJMCP007F07+ CAACAACAATGGAGGATTCGACAACAACAACAACAACAACAATGGATTCATGGAGAACAA
JMCP004E10+ CAACAACAATGGAGGATTcgaCAACAACAACAACAACAACAATGGATTCATGGAGAACAA
JMFF003B22+ CAACAACAATGGAGGATTCGACAACAACAACAACAACAACAATGGATTCATGGAGAACAA
JMCP018G11+ CAACAACGATGGAGGATTCGACAACAACAACAACAACAACAATGGATTCATGGAGAACAA
JMCP009B09+ CAACAACGATGGGGGATTCGACAACAACAACAACAACAACAATGGGTTCATGGAGAACAA
JMCP007H09+ CAACAACAATGGAGGATTCGACAACAACAACAACAACAACAATGGATTCATGGAGAACAA
rJMSF023A06- CAACAACAATGGNGGATTNGNCAACAACAACAACAACAACAATGGATTCATGGNGAACAA
JMFS100F01+ CAACAACAATGGAGGATTCGACAACAACAACAACAACAACAATGGATTCATGGAGAACAA
JMCP003A04+ CAACAACAATGGAGGATTCGACAACAACAACAACAACAACAATGGATTCATGGAGAACAA
JMCP003H05+ CAACAACAATGGAGGATTCGACAACAACAACAACAACAACGATGGATTCATGGAGAACAA
rJMSF046E16- CAACAACNATGGNGGNTTTGGCAACAACAACAACAACNACNATGGNTTCNTGGNGAACNA
____________________________________________________________
consensus CAACAACAATGGAGGATTCGACAACAACAACAACAACAACAATGGATTCATGGAGAACAA

. : . : . : . : . : . :
rJMCP004G02+ CTACCAGAATATGGAGGAGTCCCAGGACCAAGAAGACCTTCCCTGAGATTCCTTAACAAT
rJMSF046F10- CTACCNGAATATGGNGGNGTTCCNGGNCCNAGAAGNCCTTCCCTGNGATTCCTTAACAAT
JMCP002C02+ CTACCagaATATGGAGGAGTTCCAGGACCAagaAGACCTTCCCTGaGATTCCTTAACAAT
rJMCP007E08+ CTACCAGAATATGGAGGAGTTCCAGGACCAAGAAGACCTTCCCTGAGATTCCTTAACAAT
JMCP020E10+ CTACCAGAATATGGAGGAGTTCCAGGACCAAGAAGACCTTCCCTGAGATTCCTTAACAAT
JMCP005C08+ CTACCAGAATATGGAGGAGTTCCAGGACCAAGAAGACCTTCCCTGAGATTCCTTAACAAT
JMCP010D07+ CTACCAGAATATGGAGGAGTTCCAGGACCAAGAAGACCTTCCCTGAGATTCCTTAACAAT
JMCP010D06+ CTACCAGAATATGGAGGAGTTCCAGGACCAAGAAGACCTTCCCTGAGATTCCTTAACAAT
rJMCP009B02+ CTACCAGAATACGGAGGAGTTCCAGGACAAAGAAGACCTTCCCTGAGATTCCTTAACAAC
rJMCP008D07+ CTACCAGAATATGGAGGAGTTCCAGGACCAAGAAGACCTTCCCTGAGATTCCTTAACAAT
rJMFF025H01- CTNCCNGAATNTGGAGGAGTTCCNGGNCCAAGAAGACCTTCCCTGAGATTCCTTAACAAT
rJMFF049F20- CTACCAGAATATGGAGGAGTTCCAGGACCAAGAAGACCTTCCCTGAGATTCCTTAACAAT
rJMCP007F07+ CTACCAGAATATGGAGGAGCTCCAGGACCAAGAAGACCTTCCCTGAGATTCCTTAACAAT
JMCP004E10+ CTACCagaATATGGAGGAGTTCCAGGACCAagAAGACCTTCCCTGAGATTCCTTAACAAT
JMFF003B22+ CTACCAGAATATGGAGGAGTTCCAGGACCAAGAAGACCTTCCCTGAGATTCCTTAACAAT
JMCP018G11+ CTACCAGAATATGGAGGAGTTCCAGGACCAAGAAGACCTTCCCTGAGATTCCTTAACAAT
rJMFF045B10- CCAGAATATGGGGGAGTTCCAGGCCCAAGAAGCCCTTCCCTGAGATTCCTTAACAAT
JMCP009B09+ CTACCAGGATATGGAGGAGTTCCAGGACCAAGAAGACCTTCCCTGAGATTCCTTAACAAT
JMCP007H09+ CTACCAGAATATGGAGGagTTCCAGGACCAAGAAgaccttcCCTGAGATTCCTTAACAAT
rJMSF023A06- CTACCNGAATATGGNGGAGTTCCNGGACCAAGAAGACCTTCCCTGAGATTCCTTAACAAT
JMFS100F01+ CTACCAGAATATGGAGGAGTTCCAGGACCAAGAAGACCTTCCCTGAGATTCCTTAACAAT
JMCP003A04+ CTACCAGAATATGGAGGAGTTCCAGGACCAAGAAGACCTTCCCTGAGATTCCTTAACAAT
JMCP003H05+ CTACCAGAATATGGAGGAGTTCCAGGACCAAGAAGACCTTCCCTGAGATTCCTTAACAAT
rJMSF046E16- CTNCCCGAATATGGNGGNGTTCCNGGNCCNAGAAGNCCTTCCCTGNGATTCCTTAACAAT
____________________________________________________________
consensus CTACCAGAATATGGAGGAGTTCCAGGACCAAGAAGACCTTCCCTGAGATTCCTTAACAAT

. : . : . : . : . : . :
rJMCP004G02+ TTTCTTTTTTTT-CTACAAAGTTAAAAGATGATCATGTGACGGAGTCCCAAAATCTGCAA
rJMSF046F10- TTTTTTTTTTTT-CTACAAAGTTAAAAGATGATCATGTGACGGAGTCCCAAAATCTGCAA
JMCP002C02+ TTT--TTTTTTT-CTACAAAGTTAAAagaTGATCatgtgACGGagtCCCAAAATCTGCAA
rJMCP007E08+ TTT--TTTTTTT-CTACAAAGTTAAAagaTGATCATGTGACGGaGTCCCAAAATCTGCAA
JMCP020E10+ TTT---TTTTTT-CTacaaaGTTAaaaGATGATCATGTGACggagtccCaaAATCTGCA
JMCP005C08+ TTT--TTTTTTT-CTACAAAGTTAAAagaTGATCATGTGACGGagtCCCAAAATCTGCAA
JMCP010D07+ TTTTTTTTTTTT-CTACaAAGTTAaaagatgAtcatgtgACgGagtCCCAAAATCTGCAA
JMCP010D06+ TTTTTTTTTTTT-ctACaAAGTTAaaaaatgatcatgtgACggagtCCCAAAATctGCAA
rJMCP009B02+ TTTTTTTTTTTT-CTACAAAGtTAaaaaatgaTCatgtgaCggagtccCAAAATCTGCAA
rJMCP008D07+ TTT-TTTTTTTT-CTACAAAGTTAAAagaTGATCatgTGACGGagtCCCAAAATCTGCAA
rJMFF025H01- TTTTTTTTTTTT-CTACAAAGTTAAAAGATGATCATGTGACGGAGTCCCAAAATCTGCAA
rJMFF049F20- TTTTTTTTTTTTTCTACAAAGTTAAAAGATGATCATGTGACGGAGTCCCAAAATCTGCAA
rJMCP007F07+ TTT-TCTTTTTT-CTACAAAGTTAAAAGATGATCATGTGACGGAGTCCCAAAATCTGCAA
JMCP004E10+ TTT--TTTTTTT-CTACAAAGTTAAAagaTGATCATGTGACGGagtCCCAAAATCTGCAA
JMFF003B22+ TTT--TTTTTTT-CTACAAAGTTAAAANATGATCATGT
JMCP018G11+ TTT-TTTTTTTT-CTACAAAGTTAAAagaTGATCATGTGACGGagtCCCAAAATCTGCAA
rJMFF045B10- TTTTTTTTTTTT--TCCAAAGTTAAAAGATGTTCATGTGGCGGAGTCCCAAAATTTGCAA
JMCP009B09+ TTT--TTTTTTT-CTACAAAGTTAAAagaTGATCATGTGACGGagtCCCAAAATCTGCAA
JMCP007H09+ TTT-TTTTTTTT-CTACAAAGTTAAAagaTGATCATGTGACggagtCCCAAAATCTGCAA
rJMSF023A06- TTT-TTTTTTTT-CTACAAAGTTAAAAGATGATCATGTGACGGAGTCCCAAAATCTGCAA
JMFS100F01+ TTT-TTTTTTTT-CTACAAAGTTAAAAGATGATCATGTGACGGAGTCCCAAAATCTGCAA
JMCP003A04+ TTT---TTTTTT-CTACAAAGTTAAAAGATGATCATGTGACGGAGTCCCAAAATCTGCAA
JMCP003H05+ TTT-TTTTTTTT-CTACAAAGTTAAAagaTGATCATgTGACggagtCCCAAAATCTGCAA
rJMSF046E16- TTTTTTTTTTTT-CTACAAAGTTAAAAGATGATCATGTGACGGAGTCCCAAAATCTGCAA
____________________________________________________________
consensus TTT-TTTTTTTT-CTACAAAGTTAAAAGATGATCATGTGACGGAGTCCCAAAATCTGCAA

. : . : . : . : . : . :
rJMCP004G02+ ATTAAACACACGACTGGGTGTTTGATTGTGTGTTAAATTATGGTTGTTTAGGGGTGAATA
rJMSF046F10- ATTAAACACACGACTGGGTGTTTGATTGTGTGTTAAATTATGGTTGTTTAGGGGTGAATA
JMCP002C02+ ATTAAACACACGActgGGTGTTTGATTgtgTGTTAAATTATGGTTGTTTAGGGG
rJMCP007E08+ ATTAAACACACGACCGGGTGTTTGATTGTGTGTTAAATTATGGTTGTTTAGGGGTGAATA
JMCP005C08+ ATTAAACACACGACTGGGTGTTTGATTGTGTGTTAAATTATGGTTGTTTAGGGGTGAATA
JMCP010D07+ ATTAAACACAcgactgGgtGTTTGATTgtgTGTTAAATTATGGTTGTTTAGGGGTGAATA
JMCP010D06+ ATTAAAcacacgactgGgtgTTTGATTgtgtgTTAAATTatGGTtgtTTAGGGgtgAata
rJMCP009B02+ ATTAAACACAcgactgGgtgTTtgaTTgtgtgttAAATTATGGTTGTTTAGGGGtgaata
rJMCP008D07+ ATTAAACACAcgactgGGTGTTTGATTgtgTGTTAAATTATGGTTGTTTAGGGGTGAATA
rJMFF025H01- ATTAAACACACGACTGGGTGTTTGATTGTGTGTTAAATTATGGTTGTTTAGGGGTGAATA
rJMFF049F20- ATTAAACACACGACTGGGTGTTTGATTGTGTGTTAAATTATGGTTGTTTAGGGGTGAATA
rJMCP007F07+ ATTAAACACACGACTGGGTGTTTGATTGTGTGTTAAATTATGGTTGTTTAG
JMCP004E10+ ATTAAACACACGACTGGGTGTTTGATTGTGTGTTAAATTATGGTTGTTTAGGGGTGAATA
JMCP018G11+ ATTAAGcACAcgaCTGGGTGTTTGATTGTGTGTTAAATTATGGTTGTTTAGGGGTGAATA
rJMFF045B10- ATTAACCCCCCGCCGGGGGGTTTGATTGGGGGTTAAATTATGGTTGTTTAGGGGGGAATA
JMCP009B09+ ATTAAACACAcGACTGGGTGTTTGATTGTGTGTTAAATTATGGTTGTTTAGGGGTGAATA
JMCP007H09+ ATTAAACACAcgACTGGGTGTTTGATTGTGTGTTAAATTATGGTTGTTTAGGGGTGAATA
rJMSF023A06- ATTAAACACACGACTGGGTGTTTGATTGTGTGTTAAATTATGGTTGTTTAGGGGTGAATA
JMFS100F01+ ATTAAACACACGACTGGGTGTTTGATTGTGTGTTAAATTATGGTTGTTTAGGGGTGAATA
JMCP003A04+ ATTAAACACACGACTGGGTGTTTGATTGTGTGTTAAATTATGGTTGTTTAGGGGTGAATA
JMCP003H05+ ATTAAACACAcgactgGGTGTTTGATTgtgTGTTAAATTATGGTTGTTTAGGGGTGAATa
rJMSF046E16- ATTAAACACACGACTGGGTGTTTGATTGTGTGTTAAATTATGGTTGTTTAGGGGTGAATA
____________________________________________________________
consensus ATTAAACACACGACTGGGTGTTTGATTGTGTGTTAAATTATGGTTGTTTAGGGGTGAATA

. : . : . : . : . : . :
rJMCP004G02+ TGTTGATGATGATTAAGCTATAGATTTGTTCATAGGTTATTAATTATCTCCTGTCTCTAT
rJMSF046F10- TGTTGATGATGATTAAGCTATAGATTTGTTCATAGGTTATTAATTATCTCCTGTCTCTAT
rJMCP007E08+ TGTTGATGATGATTAAGCTATagaTTTGTTCATAGGTTATT
JMCP005C08+ TGTTGATGATGATTAAGCTA
JMCP010D07+ TGTTGAtgatgaTTAAgcTATagattTGTTCATAGGTTATTAATTATCTCctgTCTCTAT
JMCP010D06+ TGTTGAtgatgattaagcTaTaaattTgtTCataGGttaTTAATTATctcctgTctctat
rJMCP009B02+ TGTTGatgatgattaagcTatagattTGTTC
rJMCP008D07+ TGTTGATGaTGATTAAGCTATagaTTTGTTCATAGGTTATTAATTATCTCCTGTCTCTAT
rJMFF025H01- TGTTGATGATGATTAAGCTATAGATTTGTTCATAGGTTATTAATTATCTCCTGTCTCTAT
rJMFF049F20- TGTTGATGATGATTAAGCTATAGATTTGTTCATAGGTTATTAATTATCTCCTGTCTCTAT
JMCP004E10+ TGTTGATGATGATTAAGCTATAGATTTGTTCATAGGTTATTAATTATCTCCTGTCTCTAT
JMCP018G11+ TGTTGATGATGATTAAGCTATagaTTTGTTCATAGGTTATTAATTATCTCCTGTCTCTAT
rJMFF045B10- TGTTGATGAGGATTAAGCTATAGATTTGTTCATAGGTTATTAATTATCCCCGGTCTCTAT
JMCP009B09+ TGTTGATGATGATTAAGCTATagaTTTGTTCATAGGTTATTAATTATCTCCTGTCTCTAT
JMCP007H09+ TGTTGATGATGATTAAgcTATagaTTTGTTCATAGGTTATTAATTATCTCCTGTCTCTAT
rJMSF023A06- TGTTGATGATGATTAAGCTATAGATTTGTTCATAGGTTATTAATTATCTCCTGTCTCTA
JMFS100F01+ TGTTGATGATGATTAAGCTATAGATTTGTTCATAGGTTATTAATTATCTCCTGTCTCTAT
JMCP003A04+ TGTTGATGATGATTAAGCTATAGATTTGTTCATAGGTTATTAATTATCTCCTGTCTCTAT
JMCP003H05+ TGTTGATGATGATTAAGCTaTagaTTTGTTCATAGGTTATTAATTATCTCCTgTctctaT
rJMSF046E16- TGTTGATGATGATTAAGCTATAGATTTGTTCATAGGTTATTAATTATCTCCTGTCTCTAT
____________________________________________________________
consensus TGTTGATGATGATTAAGCTATAGATTTGTTCATAGGTTATTAATTATCTCCTGTCTCTAT

. : . : . : . : . : . :
rJMCP004G02+ AGTTATATTGTGTGTGAATGAGACCATGAAACTATGGTTTTGTGTC
rJMSF046F10- AGTTATATTGTGTGTGAATGAGA
JMCP010D07+ AGTTATAttgtgtgtgAAtgaaaCcATGAAACtAtGGTTT
JMCP010D06+ aGtTATattgggtgtgaAtgaaaCcAtgAAAC
rJMCP008D07+ AGTTATATTgtgtgTGAAtgagaccATGAAACTATGGTTTTGTGTCAA-CTGGTctagac
rJMFF025H01- AGTTATATTGTGTGTGAATGAGACCATGAAACTATGGTTTTGTGTCAA-CTGGTCTAGAC
rJMFF049F20- AGTTATATTGTGTGTGAATGAGA
JMCP004E10+ AGTTATATTGTGTGTGAATGagaCCATGAAACTATGGTTTTGTGTC
JMCP018G11+ AGTTATATTgtgTGTGAATGagaCCATGAAACTATGGTTTTGTGTCAA
rJMFF045B10- AGTTATATGGGGGGGGAAGGAGCCCATGAAACTATGGTTTTGTGTC
JMCP009B09+ AGTTATATTgtgTGTGAAtgagaccATGAAACTATGGTTTTGTGT
JMCP007H09+ AGTTATATTgtgTGTGAAtgagaccATGAAACTATGGTTTTGTG
JMFS100F01+ AG
JMCP003A04+ AGTTATATTgtgTGTGAATGAGACCATGAAACTATGGTTTTGTGTCAA-CTGGTCTAgaC
JMCP003H05+ AGTTATAttgtgtgtgaAtgagaccATGAAACTATGGTTttgtgtCAA-CTGGTctagac
rJMSF046E16- AGTTATATTGTGTGTGAATGAGACCATGAAACTATGGTTTTGTGTCAATCTGGTCTNGAC
____________________________________________________________
consensus AGTTATATTGTGTGTGAATGAGACCATGAAACTATGGTTTTGTGTCAA-CTGGTCTAGAC

. : . : . : . : . : . :
rJMCP008D07+ CAAATCTATATATTAAACT
rJMFF025H01- CAAATCTATATA
JMCP003A04+ CAAATCTATATAT
JMCP003H05+ cAAATCTATATATTAAACT
rJMSF046E16- CAAATCTANATATTAAACTCGACAGANG
____________________________________________________________
consensus CAAATCTATATATTAAACTCGACAGANG