Alignment Contig 1502

                          .    :    .    :    .    :    .    :    .    :    .    :

rJMSF051E18+ AAACAGTTTACAATCTATATGCTGATATGAAAACAAGTGAAAGAACTTTGTGAAATTCTT
rJMSF016G18+ ACTTTGTGAAATTCTT
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consensus AAACAGTTTACAATCTATATGCTGATATGAAAACAAGTGAAAGAACTTTGTGAAATTCTT

. : . : . : . : . : . :
rJMSF051E18+ GCACCACAAGTACACACACACACACAGAGATATACACTAAACACTGATATTCACAAACTC
rJMSF016G18+ GCACCACAAGTACACACACACACACAGAGATATACACTAAACACTGATATTCACAAACTC
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consensus GCACCACAAGTACACACACACACACAGAGATATACACTAAACACTGATATTCACAAACTC

. : . : . : . : . : . :
rJMSF051E18+ AATGTCTGTAAATGAAGGCAGCAAGCGGTTTCAGCAAAACATATAGTAACAATGCTCTGA
rJMSF016G18+ AATGTCTGTAAATGAAGGCAGCGAGCGGTTTCAGCANAACATATAGTAACAATGCTCTGA
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consensus AATGTCTGTAAATGAAGGCAGCAAGCGGTTTCAGCAAAACATATAGTAACAATGCTCTGA

. : . : . : . : . : . :
rJMSF051E18+ GTTCCAATCTGTAATTATTAGTCTGAAATATTGATCAGAACTAACAACACTGGAAACTGT
rJMSF016G18+ GTTCCAATCTGNAATTATTAGTCTGAAATATTGATCAGAACTAACAACACTGGAAACTGT
rJMSF043D13+ AATATTGATCAGAACTAACAACACTGGAAACTGT
rJMFF027O18+ AATATTGATCAGAACTAACAACACTGGAAACTGT
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consensus GTTCCAATCTGTAATTATTAGTCTGAAATATTGATCAGAACTAACAACACTGGAAACTGT

. : . : . : . : . : . :
rJMSF051E18+ ACCACACCAATGATTAATACAGTTTCTCAAAGAGATCTATTACTAGAAGGCTTTGACGAC
rJMSF016G18+ ACCACACCANTGATTAATACAGTTTCTCANAGAGATCTATTACTAGAAGGCTTTGACGAC
rJMSF043D13+ ACCACACCAATGATTAATACAGTTTCTCAAAGAGATCTATTACTAGAAGGCTTTGACGAC
rJMFF027O18+ ACCACACCAATGATTAATACAGTTTCTCAAAGAGATCTATTACTAGAAGGCTTTGACGAC
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consensus ACCACACCAATGATTAATACAGTTTCTCAAAGAGATCTATTACTAGAAGGCTTTGACGAC

. : . : . : . : . : . :
rJMSF051E18+ GATGATGATGAAGACTTAGCTTTGGCAAAATCAACCAGATCTTTGAAGAGCGCATCCTCT
rJMSF016G18+ GATGATGATGAAGACTTAGCTTTGGCAAAATCAACCAGATCTTTGAAGAGCGCATCCTCT
rJMSF043D13+ GATGATGATGAAGACTTAGCTTTGGCAAAATCAACCAGATCTTTGAAGAGCGCATCCTCT
rJMFF027O18+ GATGATGATGAAGACTTAGCTTTGGCAAAATCAACCAGATCTTTGAAGAGCGCATCCTCT
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consensus GATGATGATGAAGACTTAGCTTTGGCAAAATCAACCAGATCTTTGAAGAGCGCATCCTCT

. : . : . : . : . : . :
rJMSF051E18+ GCTTTTTCTTGTTTGGTTGGGGTTGGTGGATTAATCGACAGATTCTTTGTCTGCCCCACT
rJMSF016G18+ GCTTTTTCTTGTTTGGNTGGGGTTGGTGGATTAATCGACAGATTCTTTGTCTGCCCCACT
rJMSF043D13+ GCTTTTTCTTGTTTGGTTGGGGTTGGTGGATTAATCGACAGATTCTTTGTCTGCCCCACT
rJMFF027O18+ GCTTTTTCTTGTTTGGTTGGGGTTGGTGGATTAATCGACAGATTCTTTGTCTGCCCCACT
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consensus GCTTTTTCTTGTTTGGTTGGGGTTGGTGGATTAATCGACAGATTCTTTGTCTGCCCCACT

. : . : . : . : . : . :
rJMSF051E18+ AAGCTGTTGTAAGACCCCGCACTGGAATTTGAGGGGCTGCCAGGAAATTGATGCTGTTGC
rJMSF016G18+ AANCTGNTGTAANACCCCGCACTGGAATTTGAGGGGCTGCCAGGAAATTGATGCTGTTGC
rJMSF043D13+ AAGCTGTTGTAAGACCCCGCACTGGAATTTGAGGGGCTGCCAGGAAATTGATGCTGTTGC
rJMFF027O18+ AAGCTGTTGTAAGACCCCGCACTGGAATTTGAGGGGCTGCCAGGAAATTGATGCTGTTGC
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consensus AAGCTGTTGTAAGACCCCGCACTGGAATTTGAGGGGCTGCCAGGAAATTGATGCTGTTGC

. : . : . : . : . : . :
rJMSF051E18+ TCAAAATATTGTTGTCTCTGGTTAAATTTGGCAGGTGGTGGTGGGAGGGCGCCCGCAGGG
rJMSF016G18+ TCAAAATATTGTTGTCTCTGGTTAAATTTGGCANGNGGTGGTGGGAGGGCGCCCGCAGGG
rJMSF043D13+ TCAAAATATTGTTGTCTCTGGTTAAATTTGGCAGGTGGTGGTGGGAGGGCGCCCGCAGGG
rJMFF027O18+ TCAAAATATTGTTGTCTCTGGTTAAATTTGGCAGGTGGTGGTGGGAGGGCGCCCGCAGGG
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consensus TCAAAATATTGTTGTCTCTGGTTAAATTTGGCAGGTGGTGGTGGGAGGGCGCCCGCAGGG

. : . : . : . : . : . :
rJMSF051E18+ GTAGCATCCCAAGGAGCTTGAGGTAAATGATCGGCAGATTTGGGCTTTGAAGCAAACATA
rJMSF016G18+ GTAGCATCCCAAGGAGCTTGAGGTAAATGATCGGCAGATTTGGGCTTTGAAGCAAACATA
rJMSF043D13+ GTAGCATCCCAAGGAGCTTGAGGTAAATGATCGGCAGATTTGGGCTTTGAAGCAAACATA
rJMFF027O18+ GTAGCATCCCAAGGAGCTTGAGGTAAATGATCGGCAGATTTGGGCTTTGAAGCAAACATA
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consensus GTAGCATCCCAAGGAGCTTGAGGTAAATGATCGGCAGATTTGGGCTTTGAAGCAAACATA

. : . : . : . : . : . :
rJMSF051E18+ GATGCCGTGGGGTTAAGGAAATCATCATCGGCTGCCGTTGGATTTATGAGATCATCTGGA
rJMSF016G18+ GATGCCGTGGGGTTAAGGAAATCATCNTCGGCTGCCGTTGGATTTATGAGATCATCTGGA
rJMSF043D13+ GATGCCGTGGGGTTAAGGAAATCATCATCGGCTGCCGTTGGATTTATGAGATCATCTGGA
rJMFF027O18+ GATGCCGTGGGGTTAAGGAAATCATCATCGGCTGCCGTTGGATTTATGAGATCATCTGGA
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consensus GATGCCGTGGGGTTAAGGAAATCATCATCGGCTGCCGTTGGATTTATGAGATCATCTGGA

. : . : . : . : . : . :
rJMSF051E18+ GGAGAAGAAGAGAGCTTTGGAGGATTTGATTTGACAGGGATTGAATCATTTGAATGTGTA
rJMSF016G18+ GGAGAAGAAGAGAGCTTTGGAGGATTTGATTTGACAGGGATTGAATCATTTGAATGTGTA
rJMSF043D13+ GGAGAAGAAGAGAGCTTTGGAGGATTTGATTTGACAGGGATTGAATCATTTGAATGTGTA
rJMFF027O18+ GGAGAAGAAGAGAGCTTTGGAGGATTTGATTTGACAGGGATTGAATCATTTGAATGTGTA
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consensus GGAGAAGAAGAGAGCTTTGGAGGATTTGATTTGACAGGGATTGAATCATTTGAATGTGTA

. : . : . : . : . : . :
rJMSF051E18+ GAAACAGCAGTTGGTGCAGAT
rJMSF016G18+ GAAACAGCAGTTGGTGCAGATCCTGAAGGTCCAGACGATCTTTCNGACTGATATGNTTCA
rJMSF043D13+ GAAACAGCAGTTGGTGCAGATCCTGAAGGTCCAGACGATCTTTCGGACTGATATGTTTCA
rJMFF027O18+ GAAACAGCAGTTGGTGCAGATCCTGAAGGTCCAGACGATCTTTCGGACTGATATGTTTCA
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consensus GAAACAGCAGTTGGTGCAGATCCTGAAGGTCCAGACGATCTTTCGGACTGATATGTTTCA

. : . : . : . : . : . :
rJMSF016G18+ CCACTTANATAGNCAATCATTCCAGCATCAG
rJMSF043D13+ CCACTTAAATAGTCAATCATTCCAGCATCAGTAGAAACTGGATTCCTCGATGAGGGTGGT
rJMFF027O18+ CCACTTAAATAGTCAATCATTCCAGCATCAGTAGAAACTGGATTCCTCGATGAGGGTGGT
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consensus CCACTTAAATAGTCAATCATTCCAGCATCAGTAGAAACTGGATTCCTCGATGAGGGTGGT

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rJMSF043D13+ GGAGGAAGAATTGGATTGATCCGCACTGGCTCACTTTTCAAGCCAAGGGGCTTACGTCCC
rJMFF027O18+ GGAGGAAGAATTGGATTGATCCGCACTGGCTCACTTTTCAAGCCAAGGGGCTTACGTCCC
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consensus GGAGGAAGAATTGGATTGATCCGCACTGGCTCACTTTTCAAGCCAAGGGGCTTACGTCCC

. : . : . : . : . : . :
rJMSF043D13+ TGTCCCAGTCCTTGGGATGTATCTCTTGGTAGATCTGCGGGATAATNGAACAAAATCATC
rJMFF027O18+ TGTCCCAG
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consensus TGTCCCAGTCCTTGGGATGTATCTCTTGGTAGATCTGCGGGATAATNGAACAAAATCATC

. : . : . : . : . : . :
rJMSF043D13+ TTCTGACTCTTCATCC
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consensus TTCTGACTCTTCATCC