Alignment Contig 14063

                          .    :    .    :    .    :    .    :    .    :    .    :

rJMSF039O15+ GATATCAGCAGTGGTATTTACAAAATTTCATACAATTAATTATGCACTATACTGTCATAC
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consensus GATATCAGCAGTGGTATTTACAAAATTTCATACAATTAATTATGCACTATACTGTCATAC

. : . : . : . : . : . :
rJMSF039O15+ TGATACAACTGTTGCCATCAGCATTAACGGGGGAAGACAGGAACACAAGGCATCAAGAAT
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consensus TGATACAACTGTTGCCATCAGCATTAACGGGGGAAGACAGGAACACAAGGCATCAAGAAT

. : . : . : . : . : . :
rJMSF039O15+ AAAATGAACAATTCCAGGGACAACTTTCAAGCTGTATTAGATTTCAATGTATGAAGCTGC
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consensus AAAATGAACAATTCCAGGGACAACTTTCAAGCTGTATTAGATTTCAATGTATGAAGCTGC

. : . : . : . : . : . :
rJMSF039O15+ ATAGATCTGCTCAACCAGGTCACATAGGTGAAAATTTTCTCATCAGCAAAGTTAGAAGGT
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consensus ATAGATCTGCTCAACCAGGTCACATAGGTGAAAATTTTCTCATCAGCAAAGTTAGAAGGT

. : . : . : . : . : . :
rJMSF039O15+ AGGTCAGCAAAAAGTTGCACTCAAGACAGTAGCTCAGGAAATCTTCATTTAGGCATTTTA
rJMFF001M06+ TTTAGGCATTTTA
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consensus AGGTCAGCAAAAAGTTGCACTCAAGACAGTAGCTCAGGAAATCTTCATTTAGGCATTTTA

. : . : . : . : . : . :
rJMSF039O15+ GCTGTCAGAAGTAAAGATAGACTGGATTAAGCATCCATACAGAATACACCCATGCAAAAG
rJMFF001M06+ GCTGTCAGAAG-AAAGATAGACTGGATTAAGCATCCATACAGAATACACCCATGCAAAAG
rJMSF035G24+ GTAAGATAGACTGGATTAAGCATCCATACAGAATACACCCATGCAAAAG
rJMSF037D18+ GTAAGATAGACTGGATTAAGCATCCATACAGAATACACCCATGCAAAAG
rJMSF048I18+ GTAAGATAGACTGGATTAAGCATCCATACAGAATACACCCATGCAAAAG
rJMSF048A03+ AAGATAGACTGGATTAAGCATCCATACAGAATACACCCATGCAAAAG
rJMSF032K18+ GTAAGATAGACTGGATTAAGCATCCATACAGAATACACCCATGCAAAAG
rJMSF031C06+ GTAAGATAGACTGGATTAAGCATCCATACAGAATACACCCATGCAAAAG
rJMSF015M07+ AGATAGACTGGATTAAGCATCCATACAGAATACACCCATGCAAAAG
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consensus GCTGTCAGAAGGTAAGATAGACTGGATTAAGCATCCATACAGAATACACCCATGCAAAAG

. : . : . : . : . : . :
rJMSF039O15+ TCTTGGTAAAATAAAACAAACAGTGAAATGATTATAATGATTCAGTAACAGCCCAATGTC
rJMFF001M06+ TCTTGGTAAAATAAAACAAACAGTGAAATGATTATAATGATTCAGTAACAGCCCAATGTC
rJMSF035G24+ TCTTGGTAAAATAAAACAAACAGTGAAATGATTATAATGATTCAGTAACAGCCCAATGTC
rJMSF037D18+ TCTTGGTAAAATAAAACAAACAGTGAAATGATTATAATGATTCAGTAACAGCCCAATGTC
rJMSF048I18+ TCTTGGTAAAATAAAACAAACAGTGAAATGATTATAATGATTCAGTAACAGCCCAATGTC
rJMSF048A03+ TCTTGGTAAAATAAAACAAACAGTGAAATGATTATAATGATTCAGTAACAGCCCAATGTC
rJMSF032K18+ TCTTGGTAAAATAAAACAAACAGTGAAATGATTATAATGATTCAGTAACAGCCCAATGTC
rJMSF031C06+ TCTTGGTAAAATAAAACAAACAGTGAAATGATTATAATGATTCAGTAACAGCCCAATGTC
rJMSF015M07+ TCTTGGTAAAATAAAACAAACAGTGAAATGATTATAATGATTCAGTAACAGCCCAATGTC
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consensus TCTTGGTAAAATAAAACAAACAGTGAAATGATTATAATGATTCAGTAACAGCCCAATGTC

. : . : . : . : . : . :
rJMSF039O15+ CTAGAGCAGCATGCAAATTAGTGGCCAATGCTCTTTTTTGCTCTGAGAGACTCAAGAGCC
rJMFF001M06+ CTAGAGCAGCATGCAAATTAGTGGCCAATGCTCTTTTTTGCTCTGAGAGACTCAAGAGCC
rJMSF035G24+ CTAGAGCAGCATGCAAATTAGTGGCCAATGCTCTTTTTTGCTCTGAGAGACTCAAGAGCC
rJMSF037D18+ CTAGAGCAGCATGCAAATTAGTGGCCAATGCTCTTTTTTGCTCTGAGAGACTCAAGAGCC
rJMSF048I18+ CTAGAGCAGCATGCAAATTAGTGGCCAATGCTCTTTTTTGCTCTGAGAGACTCAAGAGCC
rJMSF048A03+ CTAGAGCAGCATGCAAATTAGTGGCCAATGCTCTTTTTTGCTCTGAGAGACTCAAGAGCC
rJMSF032K18+ CTAGAGCAGCATGCAAATTAGTGGCCAATGCTCTTTTTTGCTCTGAGAGACTCAAGAGCC
rJMSF031C06+ CTAGAGCAGCATGCAAATTAGTGGCCAATGCTCTTTTTTGCTCTGAGAGACTCAAGAGCC
rJMSF015M07+ CTAGAGCAGCATGCAAATTAGTGGCCAATGCTCTTTTTTGCTCTGAGAGACTCAAGAGCC
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consensus CTAGAGCAGCATGCAAATTAGTGGCCAATGCTCTTTTTTGCTCTGAGAGACTCAAGAGCC

. : . : . : . : . : . :
rJMSF039O15+ TTCTCTCGCAACTCAATTTCAAGCTTCTTCGCTGAATCCGTCCCTTCAATCTCACGTCCA
rJMFF001M06+ TTCTCTCGCAACTCAATTTCAAGCTTCTTCGCTGAATCCGTCCCTTCAATCTCACGTCCA
rJMSF035G24+ TTATCTCGCAACTCAATTTCAAGCTTCTTCGCTGAATCCGTCCCTTCAATCTCACGTCCA
rJMSF037D18+ TTCTCTCGCAACTCAATTTCAAGCTTCTTCGCTGAATCCGTCCCTTCAATCTCACGTCCA
rJMSF048I18+ TTCTCTCGCAACTCAATTTCAAGCTTCTTCGCTGAATCCGTCCCTTCAATCTCACGTCCA
rJMSF048A03+ TTCTCTCGCAACTCAATTTCAAGCTTCTTCGCTGAATCCGTCCCTTCAATCTCACGTCCA
rJMSF032K18+ TTCTCTCGCAACTCAATTTCAAGCTTCTTCGCTGAATCCGTCCCTTCAATCTCACGTCCA
rJMSF031C06+ TTCTCTCGCAACTCAATTTCAAGCTTCTTCGCTGAATCCGTCCCTTCAATCTCACGTCCA
rJMSF015M07+ TTCTCTCGCAACTCAATTTCAAGCTTCTTCGCTGAATCCGTCCCTTCAATCTCACGTCCA
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consensus TTCTCTCGCAACTCAATTTCAAGCTTCTTCGCTGAATCCGTCCCTTCAATCTCACGTCCA

. : . : . : . : . : . :
rJMSF039O15+ TGAAACTCTTTTCTGGCAAGGTCCTCATCCGAAACATTACCATCGTTAGTCTTCTCAGCA
rJMFF001M06+ TGAAACTCTTTTCTGGCAAGGTCCTCATCCGAAACATTACCATCGTTAGTCTTCTCAGCA
rJMSF035G24+ TGAAACTCTTTTCTGGCAAGGTCCTCATCCGAAACATTACCATCGTTAGTCTTCTCAGCA
rJMSF037D18+ TGAAACTCTTTTCTGGCAAGGTCCTCATCCGAAACATTACCATCGTTAGTCTTCTCAGCA
rJMSF048I18+ TGAAACTCTTTTCTGGCAAGGTCCTCATCCGAAACATTACCATCGTTAGTCTTCTCAGCA
rJMSF048A03+ TGAAACTCTTTTCTGGCAAGGTCCTCATCCGAAACATTACCATCGTTAGTCTTCTCAGCA
rJMSF032K18+ TGAAACTCTTTTCTGGCAAGGTCCTCATCCGAAACATTACCATCGTTAGTCTTCTCAGCA
rJMSF031C06+ TGAAACTCTTTTCTGGCAAGGTCCTCATCCGAAACATTACCATCGTTAGTCTTCTCAGCA
rJMSF015M07+ TGAAACTCTTTTCTGGCAAGGTCCTCATCCGAAACATTACCATCGTTAGTCTTCTCAGCA
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consensus TGAAACTCTTTTCTGGCAAGGTCCTCATCCGAAACATTACCATCGTTAGTCTTCTCAGCA

. : . : . : . : . : . :
rJMSF039O15+ TCAGAAGGCGAAGATATAGCATTATCTGACTTCAATTTTTGTTTCCCAGCACGCCTCTCT
rJMFF001M06+ TCAGAAGGCGAAGATATAGCATTATCTGACTTCAATTTTTGTTTCCCAGCACGCCTCTCT
rJMSF035G24+ TCAGAAGGCGAAGATATAGCATTATCTGACTTCAATTTTTGTTTCCCAGCACGCCTCTCT
rJMSF037D18+ TCAGAAGGCGAAGATATAGCATTATCTGACTTCAATTTTTGTTTCCCAGCACGCCTCTCT
rJMSF048I18+ TCAGAAGGCGAAGATATAGCATTATCTGACTTCAATTTTTGTTTCCCAGCACGCCTCTCT
rJMSF048A03+ TCAGAAGGCGAAGATATAGCATTATCTGACTTCAATTTTTGTTTCCCAGCACGCCTCTCT
rJMSF032K18+ TCAGAAGGCGAAGATATAGCATTATCTGACTTCAATTTTTGTTTCCCAGCACGCCTCTCT
rJMSF031C06+ TCAGAAGGCGAAGATATAGCATTATCTGACTTCAATTTTTGTTTCCCAGCACGCCTCTCT
rJMSF015M07+ TCAGAAGGCGAAGATATAGCATTATCTGACTTCAATTTTTGTTTCCCAGCACGCCTCTCT
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consensus TCAGAAGGCGAAGATATAGCATTATCTGACTTCAATTTTTGTTTCCCAGCACGCCTCTCT

. : . : . : . : . : . :
rJMSF039O15+ TCCTTCTTACGACGTCTATCATCCCGACGTCGACGCTTCTCCTCCTTCCTCAATTTCTTC
rJMFF001M06+ TCCTTCTTACGACGTCTATCATCCCGACGTCGACGCTTCTCCTCCTTCCTCAATTTCTTC
rJMSF035G24+ TCCTTCTTACGACGTCTATCATCCCGACGTCGACGCTTCTCCTCCTTCCTCAATTTCTTC
rJMSF037D18+ TCCTTCTTACGACGTCTATCATCCCGACGTCGACGCTTCTCCTCCTTCCTCAATTTCTTC
rJMSF048I18+ TCCTTCTTACGACGTCTATCATCCCGACGTCGACGCTTCTCCTCCTTCCTCAATTTCTTC
rJMSF048A03+ TCCTTCTTACGACGTCTATCATCCCGACGTCGACGCTTCTCCTCCTTCCTCAATTTCTTC
rJMSF032K18+ TCCTTCTTACGACGTCTATCATCCCGACGTCGACGCTTCTCCTCCTTCCTCAATTTCTTC
rJMSF031C06+ TCCTTCTTACGACGTCTATCATCCCGACGTCGACGCTTCTCCTCCTTCCTCAATTTCTTC
rJMSF015M07+ TCCTTCTTACGACGTCTATCATCCCGACGTCGACGCTTCTCCTCCTTCCTCAATTTCTTC
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consensus TCCTTCTTACGACGTCTATCATCCCGACGTCGACGCTTCTCCTCCTTCCTCAATTTCTTC

. : . : . : . : . : . :
rJMSF039O15+ TCTTCTTTCTTCTCTTCTTTCTTCCTCCTCTTAGCCTCCTTCCTCTCATCCACACCTGAA
rJMFF001M06+ TCTTCTTTCTTCTTTTCTTTCTTCCTCCTCTTAGCCTCCTTCCTCTCATCCACACCTGAA
rJMSF035G24+ TCTTCTTTCTTCTCTTCTTTCTTCCTCCTCTTAGCCTCCTTCCTCTCATCCACACCTGAA
rJMSF037D18+ TCTTCTTTCTTCTCTTCTTTCTTCCTCCTCTTAGCCTCCTTCCTCTCATCCACACCTGAA
rJMSF048I18+ TCTTCTTTCTTCTCTTCTTTCTTCCTCCTCTTAGCCTCCTTCCTCTCATCCACACCTGAA
rJMSF048A03+ TCTTCTTTCTTCTCTTCTTTCTTCCTCCTCTTAGCCTCCTTCCTCTCATCCACACCTGAA
rJMSF032K18+ TCTTCTTTCTTCTCTTCTTTCTTCCTCCTCTTAGCCTCCTTCCTCTCATCCACACCTGAA
rJMSF031C06+ TCTTCTTTCTTCTCTTCTTTCTTCCTCCTCTTAGCCTCCTTCCTCTCATCCACACCTGAA
rJMSF015M07+ TCTTCTTTCTTCTCTTCTTTCTTCCTCCTCTTAGCCTCCTTCCTCTCATCCACACCTGAA
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consensus TCTTCTTTCTTCTCTTCTTTCTTCCTCCTCTTAGCCTCCTTCCTCTCATCCACACCTGAA

. : . : . : . : . : . :
rJMSF039O15+ TCATAACTAGAATCATCATCAGAAGTTGACTCATGTCTGACAGAT
rJMFF001M06+ TCATAACTAGAATCATCATCAGAAGTTGACTCATGTCTGACAGATCTCTTGTGCTTCCTC
rJMSF035G24+ TCATAACTAGAATCATCATCAGAAGTTGACTCATGTCTGACAGATCTCTTGTGCTTCCTC
rJMSF037D18+ TCATAACTAGAATCATCATCAGAAGTTGACTCATGTCTGACAGATCTCTTGTGCTTCCTC
rJMSF048I18+ TCATAACTAGAATCATCATCAGAAGTTGACTCATGTCTGACAGATCTCTTGTGCTTCCTC
rJMSF048A03+ TCATAACTAGAATCATCATCAGAAGTTGACTCATGTCTGACAGATCTCTTGTGCTTCCTC
rJMSF032K18+ TCATAACTAGAATCATCATCAGAAGTTGACTCATGTCTGACAGATCTCTTGTGCTTCCTC
rJMSF031C06+ TCATAACTAGAATCATCATCAGAAGTTGACTCATGTCTGACAGATCTCTTGTGCTTCCTC
rJMSF015M07+ TCATAACTAGAATCATCATCAGAAGTTGACTCATGTCTGACAGATCTCTTGTGCTTCCTC
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consensus TCATAACTAGAATCATCATCAGAAGTTGACTCATGTCTGACAGATCTCTTGTGCTTCCTC

. : . : . : . : . : . :
rJMFF001M06+ TTTTCCTTAACTCTAGATCTTCGCTTATCACATTCCTCAGAACCTGAATTCTTATAAATT
rJMSF035G24+ TTTTCCTTAACTCTAGATCTTCGCTTATCACATTCCTCAGAACCTGAATTCTTATAAATT
rJMSF037D18+ TTTTCCTTAACTCTAGATCTTCGCTTATCACATTCCTCAGAACCTGAATTCTTATAAATT
rJMSF048I18+ TTTTCCTTAACTCTAGATCTTCGCTTATCACATTCCTCAGAACCTGAATTCTTATAAATT
rJMSF048A03+ TTTTCCTTAACTCTAGATCTTCGCTTATCACATTCCTCAGAACCTGAATTCTTATAAATT
rJMSF032K18+ TTTTCCTTAACTCTAGATCTTCGCTTATCACATTCCTCAGAACCTGAATTCTTATAAATT
rJMSF031C06+ TTTTCCTTAACTCTAGATCTTCGCTTATCACATTCCTCAGAACCTGAATTCTTATAAATT
rJMSF015M07+ TTTTCCTTAACTCTAGATCTTCGCTTATCACATTCCTCAGAACCTGAATTCTTATAAATT
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consensus TTTTCCTTAACTCTAGATCTTCGCTTATCACATTCCTCAGAACCTGAATTCTTATAAATT

. : . : . : . : . : . :
rJMFF001M06+ ATTTGTTCAACATCCTCCACTTTCCTAGATGTCTCATGTAAATGTTTTGCCTCAACAGGC
rJMSF035G24+ ATTTGTTCAACATCCTCCACTTTCCTAGATGTCTCANGTAAATGTTTTGCCTCANCAGGN
rJMSF037D18+ ATTTGTTCAACATCCTCCACTTTCCTAGATGTCTCATGTAAATGTTTTGCCTCAACAGGC
rJMSF048I18+ ATTTGTTCAACATCCTCCACTTTCCTAGATGTCTCATGTAAATGTTTTGCCTCAACAGGC
rJMSF048A03+ ATTTGTTCAACATCCTCCACTTTCCTAGATGTCTCATGTAAATGTTTTGCCTCAACAGGC
rJMSF032K18+ ATTTGTTCAACATCCTCCACTTTCCTATATGTCTCATGTAAATGTTTTGCCTCAACAGGC
rJMSF031C06+ ATTTGTTCAACATCCTCCACTTTCCTATATGTCTCATGTAAATGTTTTGCCTCAACAGGC
rJMSF015M07+ ATTTGTTCAACATCCTCCACTTTCCTAGATGTCTCATGTAAATGTTTTGCCTCAACAGGC
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consensus ATTTGTTCAACATCCTCCACTTTCCTAGATGTCTCATGTAAATGTTTTGCCTCAACAGGC

. : . : . : . : . : . :
rJMFF001M06+ TGATCCTCTCCCTGGATGGCATTTAAACGACTGAGGTTCTTCTCATCAGCTTTGGGGCTC
rJMSF035G24+ TGATCCTC
rJMSF037D18+ TGATCCTCTCCCTGGATGGCATTTAAACGACTGAGGTTCTTCTCATCAGCTTNGGGGCTC
rJMSF048I18+ TGATCCTCTCCCTGGATGGCATTTAAACGACTGAGGNTCTTCTCATCAGCTTTGGGGCTC
rJMSF048A03+ TGATCCTCTCCCTGGATGGCATTTAAACGACTGAGGTTCTTCTCATCAGCTTTGGGGCTC
rJMSF032K18+ TGATCCTCTCCCTGGATGGCATTTAAACGACTGAGGTTCTTCTCATCAGCTTTGGGGCTC
rJMSF031C06+ TGATCCTCTCCCTGGATGGCATTTAAACGACTGAGGTTCTTCTCATCAGCTTTGGGGCTC
rJMSF015M07+ TGATCCTCTCCCTGGATGGCATTTAAACGACTGAGGTTCTTCTCATCAGCTTTGGGGCTC
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consensus TGATCCTCTCCCTGGATGGCATTTAAACGACTGAGGTTCTTCTCATCAGCTTTGGGGCTC

. : . : . : . : . : . :
rJMFF001M06+ TCCAGATCCAATGATTCCCTATCCTTCTTAGCTACATGTGAGCCTCTATGAG
rJMSF037D18+ TCCAGATCCAATGATTC
rJMSF048I18+ TCCAGATCCAATGATTCCCTATCCTTCTTAGCTACATGTGAGCCTCTATGAGTCACAGGT
rJMSF048A03+ TCCA
rJMSF032K18+ TCCAGATCCAATGATTCCCTATCCTTCT
rJMSF031C06+ TCCAGATCCAATGATTCCCT
rJMSF015M07+ TCCAGATCCAATGATTCCCTATCCTTCTTAGCTACATGTGAGCCTCTATGAG
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consensus TCCAGATCCAATGATTCCCTATCCTTCTTAGCTACATGTGAGCCTCTATGAGTCACAGGT

. : . : . : . : . : . :
rJMSF048I18+ GACC
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consensus GACC