Alignment Contig 13814

                          .    :    .    :    .    :    .    :    .    :    .    :

rJMFF044H10+ GAGACAAAATAAAGGTCAAATGCAATAGATATCCAACAAGGTTTCTGCTTGCAGAAAAAC
rJMFF018G02+ TAGATATCCAACAAGGTTTCTGCTTGCAGAAAAAC
rJMSF024K20+ GGTTTCTGCTTGCAGAAAAAC
rJMSF018K17+ GGTTTCTGCTTGCAGAAAAAC
rJMSF038L23+ TTTCTGCTTGCAGAAAAAC
____________________________________________________________
consensus GAGACAAAATAAAGGTCAAATGCAATAGATATCCAACAAGGTTTCTGCTTGCAGAAAAAC

. : . : . : . : . : . :
rJMFF044H10+ ACAGCAGTTAAGGTTACAACCATG-TAAACAACTATGTAAGAAAGCTGGGAAAGAGATGA
rJMFF018G02+ ACAGCAGTTAAGGTTACAACCATG-TAAACAACTATGTAAGAAAGCTGGGAAAGAGATGA
rJMSF024K20+ ACAGCAGTTAAGGTTACAACCATG-TAAACAACTATGTAAGAAAGCTGGGAAAGAGATGA
rJMSF018K17+ ACAGCAGTTAAGGTTACAACCATG-TAAACAACTATGTAAGAAAGCTGGGAAAGAGATGA
rJMSF038L23+ ACAGCAGTTAAGGTTACAACCATGNTAAACAACTATGTAAGAAAGCTGGGAAAGAGATGA
rJMSF049B10+ ACCATG-TAAACAACTATGTAAGAAAGCTGGGAAAGAGATGA
____________________________________________________________
consensus ACAGCAGTTAAGGTTACAACCATG-TAAACAACTATGTAAGAAAGCTGGGAAAGAGATGA

. : . : . : . : . : . :
rJMFF044H10+ CAGACAAATAATACTGTGCATCTCTTGATCAAATATATACCGAATTCCAATCACATTCAT
rJMFF018G02+ CAGACAAATAATACTGTGCATCTCTTGATCAAATATATACCGAATTCCAATCACATTCAT
rJMSF024K20+ CAGACAAATAATACTGTGCATCTCTTGATCAAATATATACCGAATTCCAATCACATTCAT
rJMSF018K17+ CAGACAAATAATACTGTGCATCTCTTGATCAAATATATACCGAATTCCAATCACATTCAT
rJMSF038L23+ CAGACAAATAATACTGTGCATCTCTTGATCAAATATATACCGAATTCCAATCACATTCAT
rJMSF049B10+ CAGACAAATAATACTGTGCATCTCTTGATCAAATATATACCGAATTCCAATCACATTCAT
____________________________________________________________
consensus CAGACAAATAATACTGTGCATCTCTTGATCAAATATATACCGAATTCCAATCACATTCAT

. : . : . : . : . : . :
rJMFF044H10+ AGAGAATTTAATTTAATGCGATGTATAGTCAACCCATGTCGTGCATAGATAGATCACAAC
rJMFF018G02+ AGAGAATTTAATTTAATGCGATGTATAGTCAACCCATGTCGTGCATAGATAGATCACAAC
rJMSF024K20+ AGAGAATTTAATTTAATGCGATGTATAGTCAACCCATGTCGTGCATAGATAGATCACAAC
rJMSF018K17+ AGAGAATTTAATTTAATGCGATGTATAGTCAACCCATGTCGTGCATAGATAGATCACAAC
rJMSF038L23+ AGAGAATTTAATTTAATGCGATGTATAGTCAACCCATGTCGTGCATAGATAGATCACAAC
rJMSF049B10+ AGAGAATTTAATTTAATGCGATGTATAGTCAACCCATGTCGTGCATAGATAGATCACAAC
____________________________________________________________
consensus AGAGAATTTAATTTAATGCGATGTATAGTCAACCCATGTCGTGCATAGATAGATCACAAC

. : . : . : . : . : . :
rJMFF044H10+ GATGATGGGCTAAGACGATTGAGCGAGTGTCTCGATCTCTGCGAGAACCAATCCAGACAA
rJMFF018G02+ GATGATGGGCTAAGACGATTGAGCGAGTGTCTCGATCTCTGCGAGAACCAATCCAGACAA
rJMSF024K20+ GATGATGGGCTAAGACGATTGAGCGAGTGTCTCGATCTCTGCGAGAACCAATCCAGACAA
rJMSF018K17+ GATGATGGGCTAAGACGATTGAGCGAGTGTCTCGATCTCTGCGAGAACCAATCCAGACAA
rJMSF038L23+ GATGATGGGCTAAGACGATTGAGCGAGTGTCTCGATCTCTGCGAGAACCAATCCAGACAA
rJMSF049B10+ GATGATGGGCTAAGACGATTGAGCGAGTGTCTCGATCTCTGCGAGAACCAATCCAGACAA
____________________________________________________________
consensus GATGATGGGCTAAGACGATTGAGCGAGTGTCTCGATCTCTGCGAGAACCAATCCAGACAA

. : . : . : . : . : . :
rJMFF044H10+ CTAGATAGGTTCAGATGGTTACTCACCTTTACCATCCTTTCTGAGAGCCTCCGGAGGAAT
rJMFF018G02+ CTAGATAGGTTCAGATGGTTACTCACCTTTACCATCCTTTCTGAGAGCCTCCGGAGGAAT
rJMSF024K20+ CTAGATAGGTTCAGATGGTTACTCACCTTTACCATCCTTTCTGAGAGCCTCCGGAGGAAT
rJMSF018K17+ CTAGATAGGTTCAGATGGTTACTCACCTTTACCATCCTTTCTGAGAGCCTCCGGAGGAAT
rJMSF038L23+ CTAGATAGGTTCAGATGGTTACTCACCTTTACCATCCTTTCTGAGAGCCTCCGGAGGAAT
rJMSF049B10+ CTAGATAGGTTCAGATGGTTACTCACCTTTACCATCCTTTCTGAGAGCCTCCGGAGGAAT
____________________________________________________________
consensus CTAGATAGGTTCAGATGGTTACTCACCTTTACCATCCTTTCTGAGAGCCTCCGGAGGAAT

. : . : . : . : . : . :
rJMFF044H10+ GTCCGTTTAGTCGATCGAGCACAGCGTTGAAATCAACAGGCTGACCGCTCTCCTCCATCC
rJMFF018G02+ GTCCGTTTAGTCGATCGAGCACAGCGTTGNAATCAACAGGCTGACCGCTCTCCTCCATCC
rJMSF024K20+ GTCCGTTTAGTCGATCGAGCACAGCGTTGAAATCAACAGGCTGACCGCTCTCCTCCATCC
rJMSF018K17+ GTCCGTTTAGTCGATCGAGCACAGCGTTGAAATCAACAGGCTGACCGCTCTCCTCCATCC
rJMSF038L23+ GTCCGTTTAGTCGATCGAGCACAGCGTTGAAATCAACAGGCTGACCGCTCTCCTCCATCC
rJMSF049B10+ GTCCGTTTAGTCGATCGAGCACAGCGTTGAAATCAACAGGCTGACCGCTCTCCTCCATCC
____________________________________________________________
consensus GTCCGTTTAGTCGATCGAGCACAGCGTTGAAATCAACAGGCTGACCGCTCTCCTCCATCC

. : . : . : . : . : . :
rJMFF044H10+ TCTGGATCACGTTAATAATGTGATCCACCCTGTAACCCATGCTTGCCAGTTTCTCAACCA
rJMFF018G02+ TCTGGATCACGTTAATAATGTGATCCACCCTGTAACCCATGCTTGCCAGTTTCTCAACCA
rJMSF024K20+ TCTGGATCACGTTAATAATGTGATCCACCCTGTAACCCATGCTTGCCAGTTTCTCAACCA
rJMSF018K17+ TCTGGATCACGTTAATAATGTGATCCACCCTGTAACCCATGCTTGCCAGTTTCTCAACCA
rJMSF038L23+ TCTGGATCACGTTAATAATGTGATCCACCCTGTAACCCATGCTTGCCAGTTTCTCAACCA
rJMSF049B10+ TCTGGATCACGTTAATAATGTGATCCACCCTGTAACCCATGCTTGCCAGTTTCTCAACCA
____________________________________________________________
consensus TCTGGATCACGTTAATAATGTGATCCACCCTGTAACCCATGCTTGCCAGTTTCTCAACCA

. : . : . : . : . : . :
rJMFF044H10+ GCTCGTTGTAGGGAGGGGGGTTGCGCATGCCTTGTGGTGGACGAACCATTACATTANTGT
rJMFF018G02+ GCTCGTTGTAGGGAGGGGGGTTGCGCATGCCTTGTGGTGGACGAACCATTACATTAGTGT
rJMSF024K20+ GCTCGTTGTAGGGAGGGGGGTTGCGCATGCCTTGTGGTGGACGAACCATTACATTAGTGT
rJMSF018K17+ GCTCGTTGTAGGGAGGGGGGTTGCGCATGCCTTGTGGTGGACGAACCATTACATTAGTGT
rJMSF038L23+ GCTCGTTGTAGGGAGGGGGGTTGCGCATGCCTTGTGGTGGACGAACCATTACATTAGTGT
rJMSF049B10+ GCTCGTTGTAGGGAGGGGGGTTGCGCATGCCTTGTGGTGGACGAACCATTACATTAGTGT
____________________________________________________________
consensus GCTCGTTGTAGGGAGGGGGGTTGCGCATGCCTTGTGGTGGACGAACCATTACATTAGTGT

. : . : . : . : . : . :
rJMFF044H10+ TGGCAGGCTGTGG
rJMFF018G02+ TGGCAGGCTGTGGTGGATTTGCGAGAGAGAAGCTGGATGGAGGATAAGCGCCTTGGGGGA
rJMSF024K20+ TGGCAGGCTGTGGTGGATTTGCGAGAGAGAAGCTGGATGGAGGATAAGCGCCTTGGGGGA
rJMSF018K17+ TGGCAGGCTGTGGTGGATTTGCGAGAGAGAAGCTGGATGGAGGATAAGCGCCTTGGGGGA
rJMSF038L23+ TGGCAGGCTGTGGTGGATTTGCGAGAGAGAAGCTGGATGGAGGATAAGCGCCTTGGGGGA
rJMSF049B10+ TGGCAGGCTGTGGTGGATTTGCGAGAGAGAAGCTGGATGGAGGATAAGCGCCTTGGGGGA
____________________________________________________________
consensus TGGCAGGCTGTGGTGGATTTGCGAGAGAGAAGCTGGATGGAGGATAAGCGCCTTGGGGGA

. : . : . : . : . : . :
rJMFF018G02+ AGATAGGTTGTTGGGGGTGGATGACCCCTCGGTCCTTCACTGTCATACATTACATAAGCA
rJMSF024K20+ AGATAGGTTGTTGGGG-TGGATGACCCCTCGGTCCTTCACTGTCATACATTACATAAGCA
rJMSF018K17+ AGATAGGTTGTTGGGG-TGGATGACCCCTCGGTCCTTCACTGTCATACATTACATAAGCA
rJMSF038L23+ AGATAGGTTGTTGGGG-TGGATGACCCCTCGGTCCTTCACTGTCATACATTACATAAGCA
rJMSF049B10+ AGATAGGTTGTTGGGG-TGGATGACCCCTCGGTCCTTCACTGTCATACATTACATAAGCA
____________________________________________________________
consensus AGATAGGTTGTTGGGG-TGGATGACCCCTCGGTCCTTCACTGTCATACATTACATAAGCA

. : . : . : . : . : . :
rJMFF018G02+ TTTCCGGGGGCAAACGAATGGGTGTGGTCCACTTACCCCGTANCCATCCCCGGGGG
rJMSF024K20+ TTTCCGGGGGCAAACGA-TGGGTGTGGTCCACTTACCCCGTAGCCATCCCCGGGGGCACA
rJMSF018K17+ TTTCCGGGGGCAAACGA-TGGGTGTGGTCCACTTACCCCGTAGCCATCCCCGGGGGCACA
rJMSF038L23+ TTTCCGGGGGCAAACGA-TGGGTGTGGTCCACTTACCCCGTAGCCATCCCCGGGGGCACA
rJMSF049B10+ TTTCCGGGGGCAAACGA-TGGGTGTGGTCCACTTACCCCGTAGCCATCCCCGGGGGCACA
____________________________________________________________
consensus TTTCCGGGGGCAAACGA-TGGGTGTGGTCCACTTACCCCGTAGCCATCCCCGGGGGCACA

. : . : . : . : . : . :
rJMSF024K20+ AAATGCAGGCTTGAGATGCTGACCGGGTGCCTGCGGCTGAACTGGCCTGCTGGCAACACC
rJMSF018K17+ AAATGCAGGCTTGAGATGCTGACCGGGTGCCTGCGGCTGAACTGGCCTGCTGGCAACACC
rJMSF038L23+ AAATGCAGGCTTGAGATGCTGACCGGGTGCCTGCGGCTGAACTGGCCTGCTGGCAACACC
rJMSF049B10+ AAATGCAGGCTTGAGATGCTGACCGGGTGCCTGCGGCTGAACTGGCCTGCTGGCAACACC
____________________________________________________________
consensus AAATGCAGGCTTGAGATGCTGACCGGGTGCCTGCGGCTGAACTGGCCTGCTGGCAACACC

. : . : . : . : . : . :
rJMSF024K20+ GCTACCATACGGCATTCCC
rJMSF018K17+ GCTACCATACGGCATTCCCTCGGGGCGGCTAGCGACTGTTTGAGTCA
rJMSF038L23+ GCTACCATACGGCATTCCCTCGGGGCGGCTAGCGACTGTTTGAGTCATTCCAGAGAAAGG
rJMSF049B10+ GCTACCATACGGCATTCCCTCGGGGCGGCTAGCGACTGTTTGAGTCATTCCAGAGAAAGG
____________________________________________________________
consensus GCTACCATACGGCATTCCCTCGGGGCGGCTAGCGACTGTTTGAGTCATTCCAGAGAAAGG

. : . : . : . : . : . :
rJMSF038L23+ CACTTGCATTGACATGTTATTTGGAACCATCTCGGAA
rJMSF049B10+ CACTTGCATTGACATGTTATTTG
____________________________________________________________
consensus CACTTGCATTGACATGTTATTTGGAACCATCTCGGAA