Alignment Contig 13805

                          .    :    .    :    .    :    .    :    .    :    .    :

rJMFF043E10+ ACCCTGGAGAGXXXXXXXXXXXXXXXXXXXCAAATGAAACTTAACAGATTCTCTGTTATT
rJMFF051E12+ GAAACTTAACAGATTCTCTGTTATT
rJMFF047J08+ TGAAACTTAACAGATTCTCTGTTATT
rJMFF029N02+ GATTCTCTGTTATT
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consensus ACCCTGGAGAGNNNNNNNNNNNNNNNNNNNCAAATGAAACTTAACAGATTCTCTGTTATT

. : . : . : . : . : . :
rJMFF043E10+ TCTCGTGCTGTCGTTCATCAGCAACAATAGAAATGGTTACATACAACAAATAAAATGATT
rJMFF051E12+ TCTCGTGCTGTCGTTCATCAGCAACAATAGAAATGGTTACATACAACAAATAAAATGATT
rJMFF047J08+ TCTCGTGCTGTCGTTCATCAGCAACAATAGAAATGGTTACATACAACAAATAAAATGATT
rJMFF029N02+ TCTCGTGCTGTCGTTCATCAGCAACAATAGAAATGGTTACATACAACAAATAAAATGATT
rJMSF045P04+ TAGAAATGGTTACATACAACAAATAAAATGATT
rJMSF025C15+ ACAATAGAAATGGTTACATACAACAAATAAAATGATT
JMFN009E08- TAGAAATGGTTACATACAACAAATAAAATGATT
rJMSF038G12+ GGTTACATACAACAAATAAAATGATT
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consensus TCTCGTGCTGTCGTTCATCAGCAACAATAGAAATGGTTACATACAACAAATAAAATGATT

. : . : . : . : . : . :
rJMFF043E10+ TTACACTTCCTGTGATCTGCCTAAAACGATATCGAAAAACTTCTCCTGCTACAGCATCCA
rJMFF051E12+ TTACACTTCCTGTGATCTGCCTAGAACGATATCGAAAAACTTCTCCTGCTACAGCATCCA
rJMFF047J08+ TTACACTTCCTGTGATCTGCCTAGAACGATATCGAAAAACTTCTCCTGCTACAGCATCCA
rJMFF029N02+ TTACACTTCCTGTGATCTGCCTAGAACGATATCGAAAAACTTCTCCTGCTACAGCATCCA
rJMSF045P04+ TTACACTTCCTGTGATCTGCCTAGAACGATATCGAAAAACTTCTCCTGCTACAGCATCCA
rJMSF025C15+ TTACACTTCCTGTGATCTGCCTAGAACGATATCGAAAAACTTCTCCTGCTACAGCATCCA
JMFN009E08- TTACACTTCCTGTGATCTGCCTAGAACGATATCGAAAAACTTCTCCTGCTACAGCATCCA
rJMSF038G12+ TTACACTTCCTGTGATCTGCCTAGAACGATATCGAAAAACTTCTCCTGCTACAGCATCCA
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consensus TTACACTTCCTGTGATCTGCCTAGAACGATATCGAAAAACTTCTCCTGCTACAGCATCCA

. : . : . : . : . : . :
rJMFF043E10+ TCTTGCCTCGAATTTTTGTGTCTTCTGGTACGAGATTATGCATTGATGGTAGCCTGTATT
rJMFF051E12+ TCTTGCCTCGAATTTTTGTGTCTTCTGGTACGAGATTATGCATTGATGGTAGCCTGTATT
rJMFF047J08+ TCTTGCCTCGAATTTTTGTGTCTTCTGGTACGAGATTATGCATTGATGGTAGCCTGTATT
rJMFF029N02+ TCTTGCCTCGAATTTTTGTGTCTTCTGGTACGAGATTATGCATTGATGGTAGCCTGTATT
rJMSF045P04+ TCTTGCCTCGAATTTTTGTGTCTTCTGGTACGAGATTATGCATTGATGGTAGCCTGTATT
rJMSF025C15+ TCTTGCCTCGAATTTTTGTGTCTTCTGGTACGAGATTATGCATTGATGGTAGCCTGTATT
JMFN009E08- TCTTGCCTCGAATTTTTGTGTCTTCTGGTACGAGATTATGCATTGATGGTAGCCTGTATT
rJMSF038G12+ TCTTGCCTCGAATTTTTGTGTCTTCTGGTACGAGATTATGCATTGATGGTAGCCTGTATT
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consensus TCTTGCCTCGAATTTTTGTGTCTTCTGGTACGAGATTATGCATTGATGGTAGCCTGTATT

. : . : . : . : . : . :
rJMFF043E10+ TGTTCCAAAGTTCTCCCTTTGGTTTCAGGCACTACCTTGATCACAAACAAGATCGCAAGC
rJMFF051E12+ TGTTCCAAAGTTCTCCCTTTGGTTTCAGGCACTACCTTGATCACAAACAAGATCGCAAGC
rJMFF047J08+ TGTTCCAAAGTTCTCCCTTTGGTTTCAGGCACTACCTTGATCACAAACAAGATCGCAAGC
rJMFF029N02+ TGTTCCAAAGTTCTCCCTTTGGTTTCAGGCACTACCTTGATCACAAACAAGATCGCAAGC
rJMSF045P04+ TGTTCCAAAGTTCTCCCTTTGGTTTCAGGCACTACCTTGATCACAAACAAGATCGCAAGC
rJMSF025C15+ TGTTCCAAAGTTCTCCCTTTGGTTTCAGGCACTACCTTGATCACAAACAAGATCGCAAGC
JMFN009E08- TGTTCCAAAGTTCTCCCTTTGGTTTCAGGCACTACCTTGATCACAAACAAGATCGCAAGC
rJMSF038G12+ TGTTCCAAAGTTCTCCCTTTGGTTTCAGGCACTACCTTGATCACAAACAAGATCGCAAGC
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consensus TGTTCCAAAGTTCTCCCTTTGGTTTCAGGCACTACCTTGATCACAAACAAGATCGCAAGC

. : . : . : . : . : . :
rJMFF043E10+ ACGTTGATCGTTGCGTAAAGAATGAAAGTGCCGAATGAGTTCCAGGCCATGAGGAAATTG
rJMFF051E12+ ACGTTGATCGTTGCGTAGAGAATGAAAGTGCCGAATGAGTTCCAGGCCATGAGGAAATTG
rJMFF047J08+ ACGTTGATCGTTGCGTAGAGAATGAAAGTGCCGAATGAGTTCCAGGCCATGAGGAAATTG
rJMFF029N02+ ACGTTGATCGTTGCGTAGAGAATGAAAGTGCCGAATGAGTTCCAGGCCATGAGGAAATTG
rJMSF045P04+ ACGTTGATCGTTGCGTAGAGAATGAAAGTGCCGAATGAGTTCCAGGCCATGAGGAAATTG
rJMSF025C15+ ACGTTGATCGTTGCGTAGAGAATGAAAGTGCCGAATGAGTTCCAGGCCATGAGGAAATTG
JMFN009E08- ACGTTGATCGTTGCGTAGAGAATGAAAGTGCCGAATGAGTTCCAGGCCATGAGGAAATTG
rJMSF038G12+ ACGTTGATCGTTGCGTAGAGAATGAAAGTGCCGAATGAGTTCCAGGCCATGAGGAAATTG
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consensus ACGTTGATCGTTGCGTAGAGAATGAAAGTGCCGAATGAGTTCCAGGCCATGAGGAAATTG

. : . : . : . : . : . :
rJMFF043E10+ AAAGTGTAGGAACATAACCATGCCCCAAACCAGTTCACTAGTGTTGCAAAGCTTCCTGCA
rJMFF051E12+ AAAGTGTAGGAACATAACCATGCCCCAAACCAGTTCACTAGTGTTGCAAAGCTTCCTGCA
rJMFF047J08+ AAAGTGTAGGAACATAACCATGCCCCAAACCAGTTCACTAGTGTTGCAAAGCTTCCTGCA
rJMFF029N02+ AAAGTGTAGGAACATAACCATGCCCCAAACCAGTTCACTAGTGTTGCAAAGCTTCCTGCA
rJMSF045P04+ AAAGTGTAGGAACATAACCATGCCCCAAACCAGTTCACTAGTGTTGCAAAGCTTCCTGCA
rJMSF025C15+ AAAGTGTAGGAACATAACCATGCCCCAAACCAGTTCACTAGTGTTGCAAAGCTTCCTGCA
JMFN009E08- AAAGTGTAGGAACATAACCATGCCCCAAACCAGTTCACTAGTGTTGCAAAGCTTCCTGCA
rJMSF038G12+ AAAGTGTAGGAACATAACCATGCCCCAAACCAGTTCACTAGTGTTGCAAAGCTTCCTGCA
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consensus AAAGTGTAGGAACATAACCATGCCCCAAACCAGTTCACTAGTGTTGCAAAGCTTCCTGCA

. : . : . : . : . : . :
rJMFF043E10+ ACCCCTTTGACATTTATAGGGAAAATCTCGGACATAATAACCCATGGAACTGCTCCCATT
rJMFF051E12+ ACCCCTTTGACATTTATAGGGAAAATCTCGGACATAATAACCCATGGAACTGCTCCCATT
rJMFF047J08+ ACCCCTTTGACATTTATAGGGAAAATCTCGGACATAATAACCCATGGAACTGCTCCCATT
rJMFF029N02+ ACCCCTTTGACATTTATAGGGAAAATCTCGGACATAATAACCCATGGAACTGCTCCCATT
rJMSF045P04+ ACCCCTTTGACATTTATAGGGAAAATCTCGGACATAATAACCCATGGAACTGCTCCCATT
rJMSF025C15+ ACCCCTTTGACATTTATAGGGAAAATCTCGGACATAATAACCCATGGAACTGCTCCCATT
JMFN009E08- ACCCCTTTGACATTTATAGGGAAAATCTCGGACATAATAACCCATGGAACTGCTCCCATT
rJMSF038G12+ ACCCCTTTGACATTTATAGGGAAAATCTCGGACATAATAACCCATGGAACTGCTCCCATT
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consensus ACCCCTTTGACATTTATAGGGAAAATCTCGGACATAATAACCCATGGAACTGCTCCCATT

. : . : . : . : . : . :
rJMFF043E10+ CCTACTGAAAATGACCCTATATACACCATTATGCCTGTTACAGCAAGTACAGGTGCTGCA
rJMFF051E12+ CCTACTGAAAATGACCCTATATACACCATTATGCCTGTTACAGCAAGTACAGGTGCTGCA
rJMFF047J08+ CCTACTGAAAATGACCCTATATACACCATTATGCCTGTTACAGCAAGTACAGGTGCTGCA
rJMFF029N02+ CCTACTGAAAATGACCCTATATACACCATTATGCCTGTTACAGCAAGTACAGGTGCTGCA
rJMSF045P04+ CCTACTGAAAATGACCCTATATACACCATTATGCCTGTTACAGCAAGTACAGGTGCTGCA
rJMSF025C15+ CCTACTGAAAATGACCCTATATACACCATTATGCCTGTTACAACAAGTAAAGGTGCTGCA
JMFN009E08- CCTACTGAAAATGACCCTATATACACCATTATGCCTGTTACAGCAAGTACAGGTGCTGCA
rJMSF038G12+ CCTACTGAAAATGACCCTATATACACCATTATGCCTGTTACAGCAAGTACAGGTGCTGCA
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consensus CCTACTGAAAATGACCCTATATACACCATTATGCCTGTTACAGCAAGTACAGGTGCTGCA

. : . : . : . : . : . :
rJMFF043E10+ TTGCCTGCAATGTTAAGTCCCTTAAGATAGTACGAGACGCCTGTTAATATACAGCCGAGA
rJMFF051E12+ TTGCCTGCAATGTTAAGTCCCTTAAG-TAGTACGAGACGCCTGTTTATATACAGCCGAGA
rJMFF047J08+ TTGCCTGCAATGTTAAGTCCCTTAAGATAGTACGAGACGCCTGTTA
rJMFF029N02+ TTGCCTGCAATGTTAAGTCCCTTAAGATAGTACGAGACGCCTGTTAATATACAGCCGAGA
rJMSF045P04+ TTGCCTGCAATGTTAAGTCCCTTAAGATAGTACGAGACGCCTGTTAATATACAGCCGAGA
rJMSF025C15+ TTGCCTGCAATGTTAAGTCCCTTAAGATAGTACGAGACGCCTGTTAATATACAGCCGAGA
JMFN009E08- TTGCCTGCAATGTTAAGTCCCTTAAGATAGTACGAGACGCCTGTTAATATACAGCCGAGA
rJMSF038G12+ TTGCCTGCAATGTTAAGTCCCTTAAGATAGTACGAGACGCCTGTTAATATACAGCCGAGA
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consensus TTGCCTGCAATGTTAAGTCCCTTAAGATAGTACGAGACGCCTGTTAATATACAGCCGAGA

. : . : . : . : . : . :
rJMFF043E10+ GCAAGTCCTGATGC
rJMFF051E12+ AGCAGTCCTGATGC
rJMFF029N02+ GCAAGTCCTGATGCAGAAACCACTAAAAGAGGTTTTCTTCCAGCTTTGTCTATTAAGGTT
rJMSF045P04+ GCAAGTCCTGATGCAGAAACC
rJMSF025C15+ GCAAGTCCTGATGCAGAAACCACTAAAAGAGGTTTTCTTCCAGCTTTGTCTATTAAGGTT
JMFN009E08- GCAAGTCCTGATGCAGAAACCACTAAAAGAGGTTTTCTTCCAGCTTTGTCTATTAAGGTT
rJMSF038G12+ GCAAGTCCTGATGCAGAAACCACTAAAAGAGGTTTTCTTCCAGCTTTGTCTATTAAGGTT
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consensus GCAAGTCCTGATGCAGAAACCACTAAAAGAGGTTTTCTTCCAGCTTTGTCTATTAAGGTT

. : . : . : . : . : . :
rJMFF029N02+ GCCCCTACTGCTGTCACTATAACCTGAAGAATTGCATAGATTATAGTCCCGATATCCGAA
rJMSF025C15+ GCCCCTACTGCTGTCACTATAACC
JMFN009E08- GCCCCTACTGCTGTCACTATAACC
rJMSF038G12+ GCCCCTACTGCTGTCACTATAACCTGAAGAATTGCATAGATTATAGTCCCGATATCCGAA
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consensus GCCCCTACTGCTGTCACTATAACCTGAAGAATTGCATAGATTATAGTCCCGATATCCGAA

. : . : . : . : . : . :
rJMFF029N02+ GGAAATCCTGCAGACTCGAATATACTGCTGGTGTAGAAACAGATTCCATTAATTCCGCCA
rJMSF038G12+ GGAAATCCTGCAGACTCGAATATACTGCTGGTGTAGAAACAGATTCCATTAATTCCGCCA
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consensus GGAAATCCTGCAGACTCGAATATACTGCTGGTGTAGAAACAGATTCCATTAATTCCGCCA

. : . : . : . : . : . :
rJMFF029N02+ AGTTGCTGGCATATCATCAGTCCAACCCCAATAA
rJMSF038G12+ AGTTGCTGGCATATCATCAGTCCAACCCCAATAAAGATAGAACGCGAGTATCTTTTCTGA
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consensus AGTTGCTGGCATATCATCAGTCCAACCCCAATAAAGATAGAACGCGAGTATCTTTTCTGA

. : . : . : . : . : . :
rJMSF038G12+ AACAAATCGAATAGTTTCGCCTTTGGGAGCTTTTCAAGCATTTCTACATAATCCTGGATT
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consensus AACAAATCGAATAGTTTCGCCTTTGGGAGCTTTTCAAGCATTTCTACATAATCCTGGATT

. : . : . : . : . : . :
rJMSF038G12+ TCAGCTGCCTCTTCTGATATATCTGCATTTTTCCCACGAAGCTTTTGCAGTGCAACTTCA
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consensus TCAGCTGCCTCTTCTGATATATCTGCATTTTTCCCACGAAGCTTTTGCAGTGCAACTTCA

. : . : . : . : . : . :
rJMSF038G12+ AACTCTTTCCCGTGGCCCAATCTTTGCCAGC
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consensus AACTCTTTCCCGTGGCCCAATCTTTGCCAGC