Alignment Contig 13317

                          .    :    .    :    .    :    .    :    .    :    .    :

JMSF017D21+ GATGAATAGAAAATTGTAATCCACGGTTCACTTTCTTCCATCTTCTTTCCAAATCCCTTG
JMSF027G21+ ACTTTCTTCCATCTTCTTTCCAAATCCCTTG
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consensus GATGAATAGAAAATTGTAATCCACGGTTCACTTTCTTCCATCTTCTTTCCAAATCCCTTG

. : . : . : . : . : . :
JMSF017D21+ CCCCACCCTACCGCCATTATCAAGAATCATTTTTCTTAGAGACTATGCCATTTACGGATA
JMSF027G21+ CCCCACCCTACCGCCATTATCAAGAATCATTTTTCTTAGAGACTATGCCATTTACGGATA
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consensus CCCCACCCTACCGCCATTATCAAGAATCATTTTTCTTAGAGACTATGCCATTTACGGATA

. : . : . : . : . : . :
JMSF017D21+ TTTAGATAGCCAAGCATCAATCAAGTCGCCCACAGAATCAAGTG
JMSF027G21+ TTTAGATAGCCAAGCATCAATCAAGTCGCCCACAGAATCAAGTGTAATCTTACACACACA
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consensus TTTAGATAGCCAAGCATCAATCAAGTCGCCCACAGAATCAAGTGTAATCTTACACACACA

. : . : . : . : . : . :
JMSF027G21+ AGTTTTCCCCTTTTCATTTCACTTACATTTCCCCCATTTTTGGCATCTGCTTTGCTCGGA
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consensus AGTTTTCCCCTTTTCATTTCACTTACATTTCCCCCATTTTTGGCATCTGCTTTGCTCGGA

. : . : . : . : . : . :
JMSF027G21+ TACTTGAAATCACTGTCTGGGAAGGTTCTACTTATTTGTTGGAGGGCATAGAATTACTAT
JMFF014P07+ GAAGGTTCTACTTATTTGTTGGAGGGCATAGAATTACTAT
JMFF018L02+ GAAGGTTCTACTTATTTGTTGGAGGGCATAGAATTACTAT
JMFF008K19+ GAAGGTTCTACTTATTTGTTGGAGGGCATAGAATTACTAT
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consensus TACTTGAAATCACTGTCTGGGAAGGTTCTACTTATTTGTTGGAGGGCATAGAATTACTAT

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JMSF027G21+ TTGGATCTTTTGCCTGTATTTATATTTGAGTCATATATGGACTGATTTATACAGTTCATG
JMFF014P07+ TTGGATCTTTTGCCTGTATTTATATTTGAGTCATATATGGACTGATTTATACAGTTCATG
JMFF018L02+ TTGGATCTTTTGCCTGTATTTATATTTGAGTCATATATGGACTGATTTATACAGTTCATG
JMFF008K19+ TTGGATCTTTTGCCTGTATTTATATTTGAGTCATATATGGACTGATTTATACAGTTCATG
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consensus TTGGATCTTTTGCCTGTATTTATATTTGAGTCATATATGGACTGATTTATACAGTTCATG

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JMSF027G21+ GGAGGTGTAGAGGATGATGAACCGCCATTCAAACGTGTGAAGGTATCTTCAGGAGAACTC
JMFF014P07+ GGAGGTGTAGAGGATGATGAACCGCCATTCAAACGTGTGAAGGTATCTTCAGGAGAACTC
JMFF018L02+ GGAGGTGTAGAGGATGATGAACCGCCATTCAAACGTGTGAAGGTATCTTCAGGAGAACTC
JMFF008K19+ GGAGGTGTAGAGGATGATGAACCGCCATTCAAACGTGTGAAGGTATCTTCAGGAGAACTC
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consensus GGAGGTGTAGAGGATGATGAACCGCCATTCAAACGTGTGAAGGTATCTTCAGGAGAACTC

. : . : . : . : . : . :
JMSF027G21+ TTGAACAGAAAGTCTCTTAGAGATCCCACAAATTGTTCATTGAGTGACTGTTCAATGGCT
JMFF014P07+ TTGAACAGAAAGTCTCTTAGAGATCCCACAAATTGTTCATTGAGTGACTGTTCAATGGCT
JMFF018L02+ TTGAACAGAAAGTCTCTTAGAGATCCCACAAATTGTTCATTGAGTGACTGTTCAATGGCT
JMFF008K19+ TTGAACAGAAAGTCTCTTAGAGATCCCACAAATTGTTCATTGAGTGACTGTTCAATGGCT
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consensus TTGAACAGAAAGTCTCTTAGAGATCCCACAAATTGTTCATTGAGTGACTGTTCAATGGCT

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JMSF027G21+ CGGTCCTTAGTTTGTGAAGGGGGCAATGATGTTGTTGGTTCGAAAGGAATTGTCAAGAAA
JMFF014P07+ CGGTCCTTAGTTTGTGAAGGGGGCAATGATGTTGTTGGTTCGAAAGGAATTGTCAAGAAA
JMFF018L02+ CGGTCCTTAGTTTGTGAAGGGGGCAATGATGTTGTTGGTTCGAAAGGAATTGTCAAGAAA
JMFF008K19+ CGGTCCTTAGTTTGTGAAGGGGGCAATGATGTTGTTGGTTCGAAAGGAATTGTCAAGAAA
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consensus CGGTCCTTAGTTTGTGAAGGGGGCAATGATGTTGTTGGTTCGAAAGGAATTGTCAAGAAA

. : . : . : . : . : . :
JMSF027G21+ GTTGAATTTGTTCAAATCATAGCTGAGGCATTATATTCTCTTGGTTATAAGAAAACAGGG
JMFF014P07+ GTTGAATTTGTTCAAATCATAGCTGAGGCATTATATTCTCTTGGTTATAAGAAAACAGGG
JMFF018L02+ GTTGAATTTGTTCAAATCATAGCTGAGGCATTATATTCTCTTGGTTATAAGAAAACAGGG
JMFF008K19+ GTTGAATTTGTTCAAATCATAGCTGAGGCATTATATTCTCTTGGTTATAAGAAAACAGGG
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consensus GTTGAATTTGTTCAAATCATAGCTGAGGCATTATATTCTCTTGGTTATAAGAAAACAGGG

. : . : . : . : . : . :
JMSF027G21+ GCACAGCTAGAGGAGGAGTCAGGGATACATTTGCACTCCTCAGTTGTAAATTTGTTTATG
JMFF014P07+ GCACAGCTAGAGGAGGAGTCAGGGATACATTTGCACTCCTCAGTTGTAAATTTGTTTATG
JMFF018L02+ GCACAGCTAGAGGAGGAGTCAGGGATACATTTGCACTCCTCAGTTGTAAATTTGTTTATG
JMFF008K19+ GCACAGCTAGAGGAGGAGTCAGGGATACATTTGCACTCCTCAGTTGTAAATTTGTTTATG
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consensus GCACAGCTAGAGGAGGAGTCAGGGATACATTTGCACTCCTCAGTTGTAAATTTGTTTATG

. : . : . : . : . : . :
JMSF027G21+ CAGCAAATCCTCGATGGGAAA
JMFF014P07+ CAGCAAATCCTCG
JMFF018L02+ CAGCAAATCCTCGATGGGAAATGGGATGAAAGTGTAATCACATTGCATAGACTTGG
JMFF008K19+ CAGCAAATCCTCGATGGGAAATGGGATGAAAGTGTAATCACATTGCATAG
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consensus CAGCAAATCCTCGATGGGAAATGGGATGAAAGTGTAATCACATTGCATAGACTTGG