Alignment Contig 13226

                          .    :    .    :    .    :    .    :    .    :    .    :

JMSF005D13+ GGATATCCGAACCAAATGCTTAGCGGCGGTGTCCGAATGAGCTGCCTTCGCTTCCGGTGC
JMSF002H22+ ATCCGAACCAAATGCTTAGCGGCGGTGTCCGAATGAGCTGCCTTCGCTTCCGGTGC
JMSF042D18+ GCTTAGCGGCGGTGTCCGAATGAGCTGCCTTCGCTTCCGGTGC
JMSF008L03+ GCTTAGCGGCGGTGTCCGAATGAGCTGCCTTCGCTTCCGGTGC
JMSF038G09+ GCGGCGGTGTCCGAATGAGCTGCCTTCGCTTCCGGTGC
____________________________________________________________
consensus GGATATCCGAACCAAATGCTTAGCGGCGGTGTCCGAATGAGCTGCCTTCGCTTCCGGTGC

. : . : . : . : . : . :
JMSF005D13+ ACGGCCGAGACGCCTCTTTTGCGGGGCCCTTATGGCCTCACCTTCCACCGAGGCGGCCGG
JMSF002H22+ ACGGCCGAGACGCCTCTTTTGCGGGGCCCTTATGGCCTCACCTTCCACCGAGGCGGCCGG
JMSF042D18+ ACGGNCGAGACGCCTCTTTTGCGGGGCCCTTATGGCCTCACCTTCCNCCGAGGCGGCCGG
JMSF008L03+ ACGGCCGAGACGCCTCTTTTGCGGGGCCCTTATGGCCTCACCTTCCACCGAGGCGGCCGG
JMSF038G09+ ACGGCCGAGACGCCTCTTTTGCGGGGCCCTTATGGCCTCACCTTCCACCGAGGCGGCCGG
____________________________________________________________
consensus ACGGCCGAGACGCCTCTTTTGCGGGGCCCTTATGGCCTCACCTTCCACCGAGGCGGCCGG

. : . : . : . : . : . :
JMSF005D13+ AGATTATTCGCTACCTCCTGCTCCGCCTCCACCAAACCGGTGGCGGGAAAGAAGGAGAAG
JMSF002H22+ AGATTATTCGCTACCTCCTGCTCCGCCTCCACCAAACCGGTGGCGGGAAAGAAGGAGAAG
JMSF042D18+ AGATTATTCGCTACCTCCTGCTCCGCCTCCACCAAACCGGTGGCGGGAAAGAAGG
JMSF008L03+ AGATTATTCGCTACCTCCTGCTCCGCCTCCACCAAACCGGTGGCGGGAAAGAAGGAGAAG
JMSF038G09+ AGATTATTCGCTACCTCCTGCTCCGCCTCCACCAAACCGGTGGCGGGAAAGAAGGAGAAG
____________________________________________________________
consensus AGATTATTCGCTACCTCCTGCTCCGCCTCCACCAAACCGGTGGCGGGAAAGAAGGAGAAG

. : . : . : . : . : . :
JMSF005D13+ GTAATTGTGATATCAGGACCCACCGGTGCCGGCAAAAGCAAGCTTGCGCTTGAGCTCGCG
JMSF002H22+ GTAATTGTGATATCAGGACCCACCGGTGCCGGCAAAAGCAAGCTTGCGCTTGAGCTCGCG
JMSF008L03+ GTAATTGTGATATCAGGACCCACCGGTGCCGGCAAAAGCAAGCTTGCGCTTGAGCTCGCG
JMSF038G09+ GTAATTGTGATATCAGGACCCACCGGTGCCGGCAAAAGCAAGCTTGCGCTTGAGCTCGCG
____________________________________________________________
consensus GTAATTGTGATATCAGGACCCACCGGTGCCGGCAAAAGCAAGCTTGCGCTTGAGCTCGCG

. : . : . : . : . : . :
JMSF005D13+ AAGCGACTCAATGGAGAAATCATCAGCGCGGACTCAGTGCAGGTGTACAGAGGGCTTGAT
JMSF002H22+ AAGCGACTCAATGGAGAAATCATCAGCGCGGACTCAGTGCAGGTGTACAGAGGGCTTGAT
JMSF008L03+ AAGCGACTCAATGGAGAAATCATCAGCGCGGACTCAGTGCAGGTGTACAGAGGGCTTGAT
JMSF038G09+ AAGCGACTCAATGGAGAAATCATCAGCGCGGACTCAGTGCAGGTGTACAGAGGGCTTGAT
____________________________________________________________
consensus AAGCGACTCAATGGAGAAATCATCAGCGCGGACTCAGTGCAGGTGTACAGAGGGCTTGAT

. : . : . : . : . : . :
JMSF005D13+ ATTGGTTCTGCAAAGCCTTCACTCAGTGAAAGAAA
JMSF002H22+ ATTGGTTCTGCAANGCCTTCACTC
JMSF008L03+ ATTGGTTCTGCAAAGCCTTCACTCAGTGAAAGAAAGGAGGTGCCACACCATCTGATTGAC
JMSF038G09+ ATTGGTTCTGCAAAGCCTTCACTCAGTGAAAGAAAGGAGGTGCCACACCATCTGATTGAC
____________________________________________________________
consensus ATTGGTTCTGCAAAGCCTTCACTCAGTGAAAGAAAGGAGGTGCCACACCATCTGATTGAC

. : . : . : . : . : . :
JMSF008L03+ ATTCTGCATCCATCTGAAG
JMSF038G09+ ATTCTGCATCCATCTGAAGGTATTGCTATCTAGATCTTATCAAAGAATCCTCAATAGTAA
____________________________________________________________
consensus ATTCTGCATCCATCTGAAGGTATTGCTATCTAGATCTTATCAAAGAATCCTCAATAGTAA

. : . : . : . : . : . :
JMSF038G09+ ATGCATTTATTAAAATATTAGAATTTTGTTAATGGTGTTCCTTTTAATATGCTTGGCAGA
____________________________________________________________
consensus ATGCATTTATTAAAATATTAGAATTTTGTTAATGGTGTTCCTTTTAATATGCTTGGCAGA

. : . : . : . : . : . :
JMSF038G09+ TTTTCAAATGTTCTTTGCTAGGTATATATAATTTAAAAAAAATGACATTTGGATTAGAAT
____________________________________________________________
consensus TTTTCAAATGTTCTTTGCTAGGTATATATAATTTAAAAAAAATGACATTTGGATTAGAAT

. : . : . : . : . : . :
JMSF038G09+ AATTGTGTGCTTCAGAATATATTTTCCAACTTACGGTGATCAGTATTCCTATGGGGCTAT
____________________________________________________________
consensus AATTGTGTGCTTCAGAATATATTTTCCAACTTACGGTGATCAGTATTCCTATGGGGCTAT

. : . : . : . : . : . :
JMSF038G09+ ATGCCTATATTGTTGTCTCCTAATGAGGAGACGGTTCTTTGTGTTTTGCCCACCTTTGTG
____________________________________________________________
consensus ATGCCTATATTGTTGTCTCCTAATGAGGAGACGGTTCTTTGTGTTTTGCCCACCTTTGTG

. : . : . : . : . : . :
JMSF038G09+ CACTAGATTATTCAGT
____________________________________________________________
consensus CACTAGATTATTCAGT