Alignment Contig 12869

                          .    :    .    :    .    :    .    :    .    :    .    :

JMFF018G15+ AGATCTGTCTCTATTTTCCTCCATATTCTATAGCTTCCTTCAAATCTAATCAATGCATGA
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consensus AGATCTGTCTCTATTTTCCTCCATATTCTATAGCTTCCTTCAAATCTAATCAATGCATGA

. : . : . : . : . : . :
JMFF018G15+ TACATACATTATACATACAGACATACCCTCCTTTAGCGCTATAGTACCCAGATTCTGGAA
JMFF007I03+ ACATACAGACATACCCTCCTTTAGCGCTATAGTACCCAGATTCTGGAA
JMSF017A10+ AGATTCTGGAA
JMFF024P23+ AGCGTTATAGTACCCAGATTCTGGAA
JMFF013H12+ ACATACAGACATACCCTCCTTTAGCGCTATAGTACCCAGATTCTGGAA
JMFF042I08+ ACATACAGACATACCCTCCTTTAGCGCTATAGTACCCAGATTCTGGAA
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consensus TACATACATTATACATACAGACATACCCTCCTTTAGCGCTATAGTACCCAGATTCTGGAA

. : . : . : . : . : . :
JMFF018G15+ ACCATCTTCAAGATCCAAGCTTTCTTCACAACCCAATTCTTCTTCCAAGAACTTCTGGAG
JMFF007I03+ ACCATCTTCAAGATCCAAGCTTTCTTCACAACCCAATTCTTCTTCCAAGAACTTCTGGAG
JMSF017A10+ ACCATCTTCAAGATCCAAGCTTTCTTCACAACCCAATTCTTCTTCCAAGAACTTCTGGAG
JMFF024P23+ ACCATCTTCAAGATCCAAGCTTTCTTCACAACCCAATTCTTCTTCCAAGAACTTCTGGAG
JMFF013H12+ ACCATCTTCAAGATCCAAGCTTTCTTCACAACCCAATTCTTCTTCCAAGAACTTCTGGAG
JMFF042I08+ ACCATCTTCAAGATCCAAGCTTTCTTCACAACCCAATTCTTCTTCCAAGAACTTCTGGAG
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consensus ACCATCTTCAAGATCCAAGCTTTCTTCACAACCCAATTCTTCTTCCAAGAACTTCTGGAG

. : . : . : . : . : . :
JMFF018G15+ AGAGAGCGCATAAACGGAATTCCTGAGTTTATATTCAGTCATTATTCACACTCGCAACTA
JMFF007I03+ AGAGAGCGCATAAACGGAATTCTTGAGTTTAGATTCAGTCATTATTCACACTCGCAACTA
JMSF017A10+ AGAGAGCGCATAAACGGAATTCTTGAGTTTAGATTCAGTCATTATTCACACTCGCAACTA
JMFF024P23+ AGAGAGCGCATAAACGGAATTCTTGAGTTTAGATTCAGTCATTATTCACACTCGCAACTA
JMFF013H12+ AGAGAGCGCATAAACGGAATTCTTGAGTTTAGATTCAGTCATTATTCACACTCGCAACTA
JMFF042I08+ AGAGAGCGCATAAACGGAATTCTTGAGTTTAGATTCAGTCATTATTCACACTCGCAACTA
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consensus AGAGAGCGCATAAACGGAATTCTTGAGTTTAGATTCAGTCATTATTCACACTCGCAACTA

. : . : . : . : . : . :
JMFF018G15+ CAAGATCCAGTGTTTCCTTCAAAAACAAAAGAAGATTAAAGCTAGCCCGCCATTGAAGTT
JMFF007I03+ CAAGATCCAGTGTTTCCTTCAAAAACAAAAGAAGATTAAAGCTAGCCCGCCATTGAAGTT
JMSF017A10+ CAAGATCCAGTGTTTCCTTCAAAAACAAAAGAAGATTAAAGCTAGCCCGCCATTGAAGTT
JMFF024P23+ CAAGATCCAGTGTTTCCTTCAAAAACAAAAGAAGATTAAAGCTAGCCCGCCATTGAAGTT
JMFF013H12+ CAAGATCCAGTGTTTCCTTCAAAAACAAAAGAAGATTAAAGCTAGCCCGCCATTGAAGTT
JMFF042I08+ CAAGATCCAGTGTTTCCTTCAAAAACAAAAGAAGATTAAAGCTAGCCCGCCATTGAAGTT
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consensus CAAGATCCAGTGTTTCCTTCAAAAACAAAAGAAGATTAAAGCTAGCCCGCCATTGAAGTT

. : . : . : . : . : . :
JMFF018G15+ TGAGGCATTGTCGAACTTCAAGATCCAGTTTTTCATTGATTAAAGGTGTCTATGGAGTAA
JMFF007I03+ TGAGGCATTGTCGAACTTCAAGATCCAGTTTTTCATTGATTAAAGGTGTCTATGGAGTAA
JMSF017A10+ TGAGGCATTGTCGAACTTCAAGATCCAGTTTTTCATTGATTAAAGGTGTCTATGGA
JMFF024P23+ TGAGGCATTGTCGAACTTCAAGATCCAGTTTTTCATTGATTAAAGGTGTCTATGGAGTAA
JMFF013H12+ TGAGGCATTGTCGAACTTCAAGATCCAGTTTTTCATTGATTAAAGGTGTCTATGGAGTAA
JMFF042I08+ TGAGGCATTGTCGAACTTCAAGATCCAGTTTTTCATTGATTAAAGGTGTCTATGGAGTAA
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consensus TGAGGCATTGTCGAACTTCAAGATCCAGTTTTTCATTGATTAAAGGTGTCTATGGAGTAA

. : . : . : . : . : . :
JMFF018G15+ ACAGATCAGAGGTGAGTGAACCCTTTAGCTTCAAAATCTTCAATTTGGAAAGTTTGTGTT
JMFF007I03+ ACAGATCAGAGGTGAGTGAACCCTTTAGCTTCAAAATCTTCAATTTGGAAAGTTTGTGTT
JMFF024P23+ ACAGATCAGAGGTGAGTGAACCCTTTAGCTTCAAAATCTTCAATTTGGAAAGTTTGTGTT
JMFF013H12+ ACAGATCAGAGGTGAGTGAACCCTTTAGCTTCAAAATCTTCAATTTGGAAAGTTTGTGTT
JMFF042I08+ ACAGATCAGAGGTGAGTGAACCCTTTAGCTTCAAAATCTTCAATTTGGAAAGTTTGTGTT
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consensus ACAGATCAGAGGTGAGTGAACCCTTTAGCTTCAAAATCTTCAATTTGGAAAGTTTGTGTT

. : . : . : . : . : . :
JMFF018G15+ CATCTGTGTTGTGAATGGTTTGGATTTGAGTAGGGTTTTGTTGCAATGAGAGAACAGAAT
JMFF007I03+ CATCTGTGTTGTGAATGGTTTGGATTTGAGTAGGGTTTTGTTGCAATGAGAGAACAGAAT
JMFF024P23+ CATCTGTGTTGTGAATGGTTTGGATTTGAGTAGGGTTTTGTTGCAATGAGAGAACAGAAT
JMFF013H12+ CATCTGTGTTGTGAATGGTTTGGATTTGAGTAGGGTTTTGTTGCAATGAGAGAACAGAAT
JMFF042I08+ CATCTGTGTTGTGAATGGTTTGGATTTGAGTAGGGTTTTGTTGCAATGAGAGAACAGAAT
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consensus CATCTGTGTTGTGAATGGTTTGGATTTGAGTAGGGTTTTGTTGCAATGAGAGAACAGAAT

. : . : . : . : . : . :
JMFF018G15+ TCAATAACTGATCCAATTGGGCAAAACATAATTAAGCAGATAAGCAATGTGTGTTTCTCA
JMFF007I03+ TCAATAACTGATCCAATTGGGCAAAACATAATTAAGCAGATAAGCAATGTGTGTTTCTCA
JMFF024P23+ TCAATAACTGATCCAATTGGGCAAAACATAATTAAGCAGATAAGCAATGTGTGTTTCTCA
JMFF013H12+ TCAATAACTGATCCAATTGGGCAAAACATAATTAAGCAGATAAGCAATGTGTGTTTCTCA
JMFF042I08+ TCAATAACTGATCCAATTGGGCAAAACATAATTAAGCAGATAAGCAATGTGTGTTTCTCA
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consensus TCAATAACTGATCCAATTGGGCAAAACATAATTAAGCAGATAAGCAATGTGTGTTTCTCA

. : . : . : . : . : . :
JMFF018G15+ GTGTTTGTGTTCTCTGTGCTAATCTTAACTATGATT
JMFF007I03+ GTGTTTGTGTTCTCTGTGCTAATCTTAACTATGATTGCGGTTACATACCAACCCCCTGAT
JMFF024P23+ GTGTTTGTGTTCTCTGTGCTAATCTTAACTATGATTG
JMFF013H12+ GTGTTTGTGTTCTCTGTGCTAATCTTAACTATGATTGCGGTTACATACCAACCCCCTGAT
JMFF042I08+ GTGTTTGTGTTCTCTGTGCTAATCTTAACTATGATTGCGGTTACATACCAACCCCCTGAT
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consensus GTGTTTGTGTTCTCTGTGCTAATCTTAACTATGATTGCGGTTACATACCAACCCCCTGAT

. : . : . : . : . : . :
JMFF007I03+ CCCTGGGAATCTGCTAGAGCCCTAACTAGGGT
JMFF013H12+ CCCTGGGAATCTGCTAGAGCCCTAACTAGGGT
JMFF042I08+ CCCTGGGAATCTGCTAGAGCCCTAACTAGGGTTTTCACCGAGGTCGGAAATGCCACGTTT
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consensus CCCTGGGAATCTGCTAGAGCCCTAACTAGGGTTTTCACCGAGGTCGGAAATGCCACGTTT

. : . : . : . : . : . :
JMFF042I08+ AAGACCGACAGTTCTATCCTGAAAACCGGTGAGGATCTCATTGGCATTGCCAGTTCCCCT
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consensus AAGACCGACAGTTCTATCCTGAAAACCGGTGAGGATCTCATTGGCATTGCCAGTTCCCCT

. : . : . : . : . : . :
JMFF042I08+ GCTG
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consensus GCTG