Alignment Contig 12656

                          .    :    .    :    .    :    .    :    .    :    .    :

rJMSF029O10+ AACATTACAATTTTAATATTTAGCAATAAATTTGCCCTTATGGCATTGATACTCTACTCA
rJMSF020H15+ AATTTTAATATTTAGCAATAAATTTGCCCTTATGGCATTGATACTCTACTCA
rJMFF010P23+ ATATTTAGCAATAAATTTGCCCTTATGGCATTGATACTCTACTCA
____________________________________________________________
consensus AACATTACAATTTTAATATTTAGCAATAAATTTGCCCTTATGGCATTGATACTCTACTCA

. : . : . : . : . : . :
rJMSF029O10+ ATTATTTATTACTACACAGTTCGATCTGTGGACTTGTAGAGTTTTACACAAGAACTATAT
rJMSF020H15+ ATTATTTATTACTACACAGTTCGATCTGTGGACTTGTAGAGTTTTACACAAGAACTATAT
rJMFF010P23+ ATTATTTATTACTACACAGTTCGATCTGTGGACTTGTAGAGTTTTACACAAGAACTATAT
rJMFF016F23+ CAGTTCGATCTGTGGACTTGTAGAGTTTTACACAAGAACTATAT
rJMSF047L07+ GTTCGATCTGTGGACTTGTAGAGTTTTACACAAGAACTATAT
____________________________________________________________
consensus ATTATTTATTACTACACAGTTCGATCTGTGGACTTGTAGAGTTTTACACAAGAACTATAT

. : . : . : . : . : . :
rJMSF029O10+ ATTTCATTGATTCTGATGAAGAATCATATTTCTCAATTGCATTTTACTGTTAACTTTCTG
rJMSF020H15+ ATTTCATTGATTCTGATGAAGAATCATATTTCTCAATTGCATTTTACTGTTAACTTTCTG
rJMFF010P23+ ATTTCATTGATTCTGATGAAGAATCATATTTCTCAATTGCATTTTACTGTTAACTTCCTG
rJMFF016F23+ ATTTCATTGATTCTGATGAAGAATCATATTTCTCAATTGCATTTTACTGTTAACTTTCTG
rJMSF047L07+ ATTTCATTGATTCTGATGAAGAATCATATTTCTCAATTGCATTTTACTGTTAACTTTCTG
____________________________________________________________
consensus ATTTCATTGATTCTGATGAAGAATCATATTTCTCAATTGCATTTTACTGTTAACTTTCTG

. : . : . : . : . : . :
rJMSF029O10+ ATTCTTTGCAATGAATTGTTTGTACCATTTTGCAGATAATTTTGGAGTCCTCTTTAACGT
rJMSF020H15+ ATTCTTTGCAATGAATTGTTTGTACCATTTTGCAGATAATTTTGGAGTCCTCTTTAACGT
rJMFF010P23+ ATTCTTTGCAATGAATTGTTTGTACCATTTTGCAGATAATTTTGGAGTCCTCTTTAACGT
rJMFF016F23+ ATTCTTTGCAATGAATTGTTTGTACCATTTTGCAGATAATTTTGGAGTCCTCTTTAACGT
rJMSF047L07+ ATTCTTTGCAATGAATTGTTTGTACCATTTTGCAGATAATTTTGGAGTCCTCTTTAACGT
____________________________________________________________
consensus ATTCTTTGCAATGAATTGTTTGTACCATTTTGCAGATAATTTTGGAGTCCTCTTTAACGT

. : . : . : . : . : . :
rJMSF029O10+ GACACGATCAAATTGGTAAAGCCCCAATCTCTTTGTGTATCCAAATGACCACTCAAAGTT
rJMSF020H15+ GACACGATCAAATTGGTAAAGCCCCAATCTCTTTGTGTATCCAAATGACCACTCAAAGTT
rJMFF010P23+ GACACGATCAAATTGGTAAAGCCCCAATCTCTTTGTGTATCCAAATGACCACTCAAAGTT
rJMFF016F23+ GACACGATCAAATTGGTAAAGCCCCAATCTCTTTGTGTATCCAAATGACCACTCAAAGTT
rJMSF047L07+ GACACGATCAAATTGGTAAAGCCCCAATCTCTTTGTGTATCCAAATGACCACTCAAAGTT
____________________________________________________________
consensus GACACGATCAAATTGGTAAAGCCCCAATCTCTTTGTGTATCCAAATGACCACTCAAAGTT

. : . : . : . : . : . :
rJMSF029O10+ ATCAAACAACGACCAAATAAAATAGCCTCTAACATCTGCTCCTTTCCTGATGGTAGTTGA
rJMSF020H15+ ATCAAACAACGACCAAATAAAATAGCCTCTAACATCTGCTCCTTTCCTGATGGTAGTTGA
rJMFF010P23+ ATCAAACAACGACCAAATAAAATAGCCTCTAACATCTGCTCCTTTCCTGATGGTAGTTGA
rJMFF016F23+ ATCAAACAACGACCAAATAAAATAGCCTCTAACATCTGCTCCTTTCCTGATGGTAGTTGA
rJMSF047L07+ ATCAAACAACGACCAAATAAAATAGCCTCTAACATCTGCTCCTTTCCTGATGGTAGTTGA
____________________________________________________________
consensus ATCAAACAACGACCAAATAAAATAGCCTCTAACATCTGCTCCTTTCCTGATGGTAGTTGA

. : . : . : . : . : . :
rJMSF029O10+ AAGGGCATTTAGATAATCAGCCAAGAATTTGACTCGTTTGGTATCATTCAATACATCTTC
rJMSF020H15+ AAGGGCATTTAGATAATCAGCCAAGAATTTGACTCGTTTGGTATCATTCAATACATCTTC
rJMFF010P23+ AAGGGCATTTAGATAATCAGCCAAGAATTTGACTCGTTTGGTATCATTCAATACATCTTC
rJMFF016F23+ AAGGGCATTTAGATAATCAGCCAAGAATTTGACTCGTTTGGTATCATTCAATACATCTTC
rJMSF047L07+ AAGGGCATTTAGATAATCAGCCAAGAATTTGACTCGTTTGGTATCATTCAATACATCTTC
____________________________________________________________
consensus AAGGGCATTTAGATAATCAGCCAAGAATTTGACTCGTTTGGTATCATTCAATACATCTTC

. : . : . : . : . : . :
rJMSF029O10+ CATGCTAGAGTTTGGGGTGGTTGTGTCACAATAACCATTTTCTGTTACATAAAGTGGTAT
rJMSF020H15+ CATGCTAGAGTTTGGGGTGGTTGTGTCACAATAACCATTTTCTGTTACATAAAGTGGTAT
rJMFF010P23+ CATGCTAGAGTTTGGGGTGGTTGTGTCACAATAACCATTTTCTGTTACATAAAGTGGTAT
rJMFF016F23+ CATGCTAGAGTTTGGGGTGGTTGTGTCACAATAACCATTTTCTGTTACATAAAGTGGTAT
rJMSF047L07+ CATGCTAGAGTTTGGGGTGGTTGTGTCACAATAACCATTTTCTGTTACATAAAGTGGTAT
____________________________________________________________
consensus CATGCTAGAGTTTGGGGTGGTTGTGTCACAATAACCATTTTCTGTTACATAAAGTGGTAT

. : . : . : . : . : . :
rJMSF029O10+ GTTTGAAAATTTTTCTTTCACATAAGTTACTACTTTCTCCATTCCAGGTGGATAAACAAC
rJMSF020H15+ GTTTGAAAATTTTTCTTTCACATAAGTTACTACTTTCTCCATTCCAGGTGGATAAACAAC
rJMFF010P23+ GTTTGAAAATTTTTCTTTCACATAAGTTACTACTTTCTCCATTCCAGGTGGATAAACAAC
rJMFF016F23+ GTTTGAAAATTTTTCTTTCACATAAGTTACTACTTTCTCCATTCCAGGTGGATAAACAAC
rJMSF047L07+ GTTTGAAAATTTTTCTTTCACATAAGTTACTACTTTCTCCATTCCAGGTGGATAAACAAC
____________________________________________________________
consensus GTTTGAAAATTTTTCTTTCACATAAGTTACTACTTTCTCCATTCCAGGTGGATAAACAAC

. : . : . : . : . : . :
rJMSF029O10+ TAGATATTCTAACCCTGCCATTTCCCCAATAAGGTTGCCGTCCTTGGAAAAACTTTGGCC
rJMSF020H15+ TAGATATTCTAACCCTGCCATTTCCCCAATAAGGTTGCCGTCCTTGGAAAAACTTTGGCC
rJMFF010P23+ TAGATATTCTAACCCTGCCATTTCCCCAATAAGGTTGCCGTCCTTGGAAAAACTTTGGCC
rJMFF016F23+ TAGATATTCTAACCCTGCCATTTCCCCAATAAGGTTGCCGTCCTTGGAAAAACTTTGGCC
rJMSF047L07+ TAGATATTCTAACCCTGCCATTTCCCCAATAAGGTTGCCGTCCTTGGAAAAACTTTGGCC
____________________________________________________________
consensus TAGATATTCTAACCCTGCCATTTCCCCAATAAGGTTGCCGTCCTTGGAAAAACTTTGGCC

. : . : . : . : . : . :
rJMSF029O10+ AACAAAACCTTCTTCTCTGGTGTTTCCTGTCATAGAAGGGTCACATGTAGAATACAAGCA
rJMSF020H15+ AACAAAACCTTCTTCTCTGGTGTTTCCTGTCATAGAAGGGTCACATGTAGAATACAAGCA
rJMFF010P23+ AACAAAACCTTCTTCTCTGGTGTTTCCTGTCATAGAAGGGTCACATGTAGAATACAAGCA
rJMFF016F23+ AACAAAACCTTCTTCTCTGGTGTTTCCTGTCATAGAAGGGTCACATGTAGAATACAAGCA
rJMSF047L07+ AACAAAACCTTCTTCTCTGGTGTTTCCTGTCATAGAAGGGTCACATGTAGAATACAAGCA
____________________________________________________________
consensus AACAAAACCTTCTTCTCTGGTGTTTCCTGTCATAGAAGGGTCACATGTAGAATACAAGCA

. : . : . : . : . : . :
rJMSF029O10+ ATCTTGGGCATAATAGGTTGTGTAATGGTTGATTCCAATAAAATCCA-CCCTCCAGCAGC
rJMSF020H15+ ATCTTGGGCATAATAGGTTGTGTAATGGTTGATTCCAATAAAATCCAACCCTCCAGC
rJMFF010P23+ ATCTTGGGCATAATAGGTTGTGTAATGGTTGATTCCAATAAAATCCAACCCTCCAGCAGC
rJMFF016F23+ ATCTTGGGCATAATAGGTTGTGTAATGGTTGATTCCAATAAAATCCAACCCTCCAGCAGC
rJMSF047L07+ ATCTTGGGCATAATAGGTTGTGTAATGGTTGATTCCAATAAAATCCAACCCTCCAGCAGC
____________________________________________________________
consensus ATCTTGGGCATAATAGGTTGTGTAATGGTTGATTCCAATAAAATCCAACCCTCCAGCAGC

. : . : . : . : . : . :
rJMSF029O10+ TTTTAACTTTTCC
rJMFF010P23+ TTTTAACTTTTCCAGGTCAATACTTGAAAACTCTGGTAA
rJMFF016F23+ TTTTAACTTTTCCAGGTCAATACTTGAAAACTCTGGTAAATTTGACCCCAAAATATCTTT
rJMSF047L07+ TTTTAACTTTTCCAGGTCAATACTTGAAAACTCTGGTAAATTTGACCCCAAAATATCTTT
____________________________________________________________
consensus TTTTAACTTTTCCAGGTCAATACTTGAAAACTCTGGTAAATTTGACCCCAAAATATCTTT

. : . : . : . : . : . :
rJMFF016F23+ CATGTCTTTGGGATATGATCCATATATGATTGGGTCC
rJMSF047L07+ CATGTCTTTGGGATATGATCCATATATGATTGGGTCCAAGAACCAGTTTGACAAGAAGGA
____________________________________________________________
consensus CATGTCTTTGGGATATGATCCATATATGATTGGGTCCAAGAACCAGTTTGACAAGAAGGA

. : . : . : . : . : . :
rJMSF047L07+ ATGAGCTCTCTCAGCTGCAGCTTGGTCTGCAGTG
____________________________________________________________
consensus ATGAGCTCTCTCAGCTGCAGCTTGGTCTGCAGTG