Alignment Contig 12278

                          .    :    .    :    .    :    .    :    .    :    .    :

rJMFF017D23- GGATGCCGAGAGCCTGAACCCGGGAGAGCAGATATACGAGAAGCTAATTTCTGGCATGTA
rJMFF024G08- GAACCCGGGAGAGCAGATATACGAGAAGCTAATTTCTGGCATGTA
rJMFF002F10- CTGGCATGTA
____________________________________________________________
consensus GGATGCCGAGAGCCTGAACCCGGGAGAGCAGATATACGAGAAGCTAATTTCTGGCATGTA

. : . : . : . : . : . :
rJMFF017D23- TCTCGGAGAGATTGTCCGGAGAGTCTTGTGCAAAATGGCTGAAGAAGCCGAACTTTTT-G
rJMFF024G08- TCTCGGAGAGATTGTCCGGAGAGTCTTGTGCAAAATGGCTGAAGAAGCCGAACTTTTT-G
rJMFF013N03- CGGAGAGATTGTCCGGAGAGTCTTGTGCAAAATGGCTGAAGAAGCCGAACTTTTTTG
rJMFF003F16- CGGAGAGATTGTCCGGAGAGTCTTGTGCAAAATGGCTGAAGAAGCCGAACTTTTT-G
rJMFF028D13- GTCTTGTGCAAAATGGCTGAAGAAGCCGAACTTTTT-G
rJMFF002F10- TCTCGGAGAGATTGTCCGGAGAGTCTTGTGCAAAATGGCTGAAGAAGCCGAACTTTTT-G
rJMFF033K12- CTTGTGCAAAATGGCTGAAGAAGCCGAACTTTTT-G
____________________________________________________________
consensus TCTCGGAGAGATTGTCCGGAGAGTCTTGTGCAAAATGGCTGAAGAAGCCGAACTTTTT-G

. : . : . : . : . : . :
rJMFF017D23- GTGATACTGTCCCACCAAAGTTGAAAATTCCTTTCATTTTAAGGACTCCTGACATGTCTG
rJMFF024G08- GTGATACTGTCCCACCAAAGTTGAAAATTCCTTTCATTTTAAGGACTCCTGACATGTCTG
rJMFF013N03- GTGATACTGTCCCACCAAAGTTGAAAATTCCTTTCATTTTAAGGACTCCTGACATGTCTG
rJMFF003F16- GTGATACTGTCCCACCAAAGTTGAAAATTCCTTTCATTTTAAGGACTCCTGACATGTCTG
rJMFF028D13- GTGATACTGTCCCACCAAAGTTGAAAATTCCTTTCATTTTAAGGACTCCTGACATGTCTG
rJMFF002F10- GTGATACTGTCCCACCAAAGTTGAAAATTCCTTTCATTTTAAGGACTCCTGACATGTCTG
rJMFF033K12- GTGATACTGTCCCACCAAAGTTGAAAATTCCTTTCATTTTAAGGACTCCTGACATGTCTG
____________________________________________________________
consensus GTGATACTGTCCCACCAAAGTTGAAAATTCCTTTCATTTTAAGGACTCCTGACATGTCTG

. : . : . : . : . : . :
rJMFF017D23- CAATGCATCGTGACACATCTGCTGATCTGAAGGTGGTTGGCAACAAACTAAAGGATATTT
rJMFF024G08- CAATGCATCGTGACACATCTGCTGATCTGAAGGTGGTTGGCAACAAACTAAAGGATATTT
rJMFF013N03- CAATGCATCGTGACACATCTGCTGATCTGAAGGTGGTTGGCAACAAACTAAAGGATATTT
rJMFF003F16- CAATGCATCGTGACACATCTGCTGATCTGAAGGTGGTTGGCAACAAACTAAAGGATATTT
rJMFF028D13- CAATGCATCGTGACACATCTGCTGATCTGAAGGTGGTTGGCAACAAACTAAAGGATATTT
rJMFF002F10- CAATGCATCGTGACACATCTGCTGATCTGAAGGTGGTTGGCAACAAACTAAAGGATATTT
rJMFF033K12- CAATGCATCGTGACACATCTGCTGATCTGAAGGTGGTTGGCAACAAACTAAAGGATATTT
____________________________________________________________
consensus CAATGCATCGTGACACATCTGCTGATCTGAAGGTGGTTGGCAACAAACTAAAGGATATTT

. : . : . : . : . : . :
rJMFF017D23- TGGAGATACCCAACTCTTCCTTGAAAATGCGGAAAGCAGTGGTCGAGGTGTGCGACATTG
rJMFF024G08- TGGAGATACCCAACTCTTCCTTGAAAATGCGGAAAGTAGTGGTCGAGGTGTGCGACATTG
rJMFF013N03- TGGAGATACCCAACTCTTCCTTGAAAATGCGGAAAGTAGTGGTCGAGGTGTGCGACATTG
rJMFF003F16- TGGAGATACCCAACTCTTCCTTGAAAATGCGGAAAGTAGTGGTCGAGGTGTGCGACATTG
rJMFF028D13- TGGAGATACCCAACTCTTCCTTGAAAATGCGGAAAGTAGTGGTCGAGGTGTGCGACATTG
rJMFF002F10- TGGAGATACCCAACTCTTCCTTGAAAATGCGGAAAGTAGTGGTCGAGGTGTGCGACATTG
rJMFF033K12- TGGAGATACCCAACTCTTCCTTGAAAATGCGGAAAGTAGTGGTCGAGGTGTGCGACATTG
____________________________________________________________
consensus TGGAGATACCCAACTCTTCCTTGAAAATGCGGAAAGTAGTGGTCGAGGTGTGCGACATTG

. : . : . : . : . : . :
rJMFF017D23- TTGCGACTCGAGCAGCCCGCCTCTCGGCTGCAGGGATCGTAGGCATACTCAAGAAGTTGG
rJMFF024G08- TTGCGACTCGAGCAGCCCGCCTCTCGGCTGCAGGGATCGTAGGCATACTCAAGAAGTTGG
rJMFF013N03- TTGCGACTCGAGCAGCCCGCCTCTCGGCTGCAGGGATCGTAGGCATACTCAAGAAGTTGG
rJMFF003F16- TTGCGACTCGAGCAGCCCGCCTCTCGGCTGCAGGGATCGTAGGCATACTCAAGAAGTTGG
rJMFF028D13- TTGCGACTCGAGCAGCCCGCCTCTCGGCTGCAGGGATCGTAGGCATACTCAAGAAGTTGG
rJMFF002F10- TTGCGACTCGAGCAGCCCGCCTCTCGGCTGCAGGGATCGTAGGCATACTCAAGAAGTTGG
rJMFF033K12- TTGCGACTCGAGCAGCCCGCCTCTCGGCTGCAGGGATCGTAGGCATACTCAAGAAGTTGG
____________________________________________________________
consensus TTGCGACTCGAGCAGCCCGCCTCTCGGCTGCAGGGATCGTAGGCATACTCAAGAAGTTGG

. : . : . : . : . : . :
rJMFF017D23- GAAGGGACAGTTGGAAGGCGGGGGAGAGCAACAAGAGATCCGTCGTGGCAGTGGACGGAG
rJMFF024G08- GAAGGGACAGTTGGAAGGCGGGGGAGAGCAACAAGAGATCCGTCGTGGCAGTGGACGGAG
rJMFF013N03- GAAGGGACAGTTGGAAGGCGGGGGAGAGCAACAAGAGATCCGTCGTGGCAGTGGACGGAG
rJMFF003F16- GAAGGGACAGTTGGAAGGCGGGGGAGAGCAACAAGAGATCCGTCGTGGCAGTGGACGGAG
rJMFF028D13- GAAGGGACAGTTGGAAGGCGGGGGAGAGCAACAAGAGATCCGTCGTGGCAGTGGACGGAG
rJMFF002F10- GAAGGGACAGTTGGAAGGCGGGGGAGAGCAACAAGAGATCCGTCGTGGCAGTGGACGGAG
rJMFF033K12- GAAGGGACAGTTGGAAGGCGGGGGAGAGCAACAAGAGATCCGTCGTGGCAGTGGACGGAG
____________________________________________________________
consensus GAAGGGACAGTTGGAAGGCGGGGGAGAGCAACAAGAGATCCGTCGTGGCAGTGGACGGAG

. : . : . : . : . : . :
rJMFF017D23- GGCTGTTCGAGCACTACACCAAGTTCAGAGACTGTATGGAGAGCACACTTAAAGAGCTGC
rJMFF024G08- GGCTGTTCGAGCACTACACCAAGTTCAGAGACTGTATGGAGAGCACACTTAAAGAGCTGC
rJMFF013N03- GGCTGTTCGAGCACTACACCAAGTTCAGAGACTGTATGGAGAGCACACTTAAAGAGCTGC
rJMFF003F16- GGCTGTTCGAGCACTACACCAAGTTCAGAGACTGTATGGAGAGCACACTTAAAGAGCTGC
rJMFF028D13- GGCTGTTCGAGCACTACACCAAGTTCAGAGACTGTATGGAGAGCACACTTAAAGAGCTGC
rJMFF002F10- GGCTGTTCGAGCACTACACCAAGTTCAGAGACTGTATGGAGAGCACACTTAAAGAGCTGC
rJMFF033K12- GGCTGTTCGAGCACTACACCAAGTTCAGAGACTGTATGGAGAGCACACTTANAGAGCTGC
rJMFF047M11- CCAAGTTCAGAGACTGTATGGAGAGCACACTTAAAGAGCTGC
rJMFF047K23- CAAGTTCAGAGACTGTATGGAGAGCACACTTAAAGAGCTGC
____________________________________________________________
consensus GGCTGTTCGAGCACTACACCAAGTTCAGAGACTGTATGGAGAGCACACTTAAAGAGCTGC

. : . : . : . : . : . :
rJMFF017D23- TGGGGGAGGCGTCCGAGAGCCTCGTCATCGAGCACTCAAACGACGGCTCGGGTATCGGAG
rJMFF024G08- TGGGGGAGGCGTCCGAGAGCCTCGTCATCGAGCACTCAAACGACGGCTCGGGTATCGGAG
rJMFF013N03- TGGGGGAGGCGTCCGAGAGCCTCGTCATCGAGCACTCAAACGACGGCTCGGGTATCGGAG
rJMFF003F16- TGGGGGAGGCGTCCGAGAGCCTCGTCATCGAGCACTCAAACGACGGCTCGGGTATCGGAG
rJMFF028D13- TGGGGGAGGCGTCCGAGAGCCTCGTCATCGAGCACTCAAACGACGGCTCGGGTATCGGAG
rJMFF002F10- TGGGGGAGGCGTCCGAGAGCCTCGTCATCGAGCACTCAAACGACGGCTCGGGTATCGGAG
rJMFF033K12- TGGGGGAGGCGTCCGAGAGCCTCGTCATCGAGCACTCAAACGACGGCTCGGGTATCGGAG
rJMFF047M11- TGGGGGAGGCGTCCGAGAGCCTCGTCATCGAGCACTCAAACGACGGCTCGGGTATCGGAG
rJMFF047K23- TGGGGGAGGCGTCCGAGAGCCTCGTCATCGAGCACTCAAACGACGGCTCGGGTATCGGAG
____________________________________________________________
consensus TGGGGGAGGCGTCCGAGAGCCTCGTCATCGAGCACTCAAACGACGGCTCGGGTATCGGAG

. : . : . : . : . : . :
rJMFF017D23- CTGCGCTCTTGGCGGCCGCTCATTCGCAGTACCTCGAAGCCGACGAATCTCTTTGGTCGG
rJMFF024G08- CTGCGCTCTTGGCGGCCGCTCATTCGCAGTACCTCGAAGCCGACGAATCTCTTTGGTCGG
rJMFF013N03- CTGCGCTCTTGGCGGCCGCTCATTCGCAGTACCTCGAAGCCGACGAATCTCTTTGGTCGG
rJMFF003F16- CTGCGCTCTTGGCGGCCGCTCATTCGCAGTACCTCGAAGCCGACGAATCTCTTTGGTCGG
rJMFF028D13- CTGCGCTCTTGGCGGCCGCTCATTCGCAGTACCTCGAAGCCGACGAATCTCTTTGGTCGG
rJMFF002F10- CTGCGCTCTTGGCGGCCGCTCATTCGCAGTACCTCGAAGCCGACGAATCTCTTTGGTCGG
rJMFF033K12- CTGCGCTCTTGGCGGCCGCTCATTCGCAGTACCTCGAAGCCGACGAATCTCTTTGGTCGG
rJMFF047M11- CTGCGCTCTTGGCGGCCGCTCATTCGCAGTACCTCGAAGCCGACGAATCTCTTTGGTCGG
rJMFF047K23- CTGCGCTCTTGGCGGCCGCTCATTCGCAGTACCTCGAAGCCGACGAATCTCTTTGGTCGG
____________________________________________________________
consensus CTGCGCTCTTGGCGGCCGCTCATTCGCAGTACCTCGAAGCCGACGAATCTCTTTGGTCGG

. : . : . : . : . : . :
rJMFF017D23- TGGCCGAAGCAGTTGCGTTTCCGGCAGAGTAATTGTCAGAGGCTTTCTTGAGTTGGAGTC
rJMFF024G08- TGGCCGAAGCAGTTGCGTTTCCGGCAGAGTAATTGTCAGAGGCTTTCTTGAGTTGGAGTC
rJMFF013N03- TGGCCGAAGCAGTTGCGTTTCCGGCAGAGTAATTGTCAGAGGCTTTCTTGAGTTGGAGTC
rJMFF003F16- TGGCCGAAGCAGTTGCGTTTCCGGCAGAGTAATTGTCAGAGGCTTTCTTGAGTTGGAGTC
rJMFF028D13- TGGCCGAAGCAGTTGCGTTTCCGGCAGAGTAATTGTCAGAGGCTTTCTTGAGTTGGAGTC
rJMFF002F10- TGGCCGAAGCAGTTGCGTTTCCGGCAGAGTAATTGTCAGAGGCTTTCTTGAGTTGGAGTC
rJMFF033K12- TGGCCGAAGCAGTTGCGTTTCCGGCAGAGTAATTGTCAGAGGCTTTCTTGAGTTGGAGTC
rJMFF047M11- TGGCCGAAGCAGTTGCGTTTCCGGCAGAGTAATTGTCAGAGGCTTTCTTGAGTTGGAGTC
JMCP012C04+ AGTC
JMCP012A06+ C
JMCP011G01+ AATTGTCAGAGGCTTTCTTGAGTTGGAGTC
JMCP011C01+ AATTGTCAGAGGCTTTCTTGAGTTGGAGTC
JMCP004A06+ AATTGTCAGAGGCTTTCTTGAGTTGGAGTC
JMCP011F02+ AATTGTCAGAGGCTTTCTTGAGTTGGAGTC
JMCP011D02+ AATTGTCAGAGGCTTTCTTGAGTTGGAGTC
JMCP011H08+ AATTGTCAGAGGCTTTCTTGAGTTGGAGTC
JMCP011D08+ TCAACGCAGAGTAATTGTCAGAGGCTTTCTTGAGTTGGAGTC
JMCP011G10+ AGAGTAATTGTCAgaggctttcTTGAGTTGGAGTC
JMCP011B07+ CGCAGAGTAATTGTCAGAGGCTTTCTTGAGTTGGAGTC
JMCP011G09+ CGCAGAGTAATTGTCAGAGGCTTTCTTGAGTTGGAGTC
JMCP011F06+ CGCAGAGTAATTGTCAGAGGCTTTCTTGAGTTGGAGTC
JMCP011D03+ CGCAGAGTAATTGTCAGAGGCTTTCTTGAGTTGGAGTC
JMCP011A07+ AACGCAGAGTAATTGTCAGAGGCTTTCTTGAGTTGGAGTC
JMCP011G04+ TCAACGCAGAGTAATTGTCAGAGGCTTTCTTGAGTTGGAGTC
JMCP011F10+ TCAACGCAGAGTAATTGTCAGAGGCTTTCTTGAGTTGGAGTC
JMCP011C02+ TCAACGCAGAGTAATTGTCAGAGGCTTTCTTGAGTTGGAGTC
rJMFF047K23- TGGCCGAAGCAGTTGCGTTTCCGGCAGAGTAATTGTCAGAGGCTTTCTTGAGTTGGAGTC
JMCP003C08+ AATTGTCAGAGGCTTTCTTGAGTTGGAGTC
JMCP009D06+ AATTGTCagaGGCTTTCTTGAGTTGGAGTC
____________________________________________________________
consensus TGGCCGAAGCAGTTGCGTTTCCCGCAGAGTAATTGTCAGAGGCTTTCTTGAGTTGGAGTC

. : . : . : . : . : . :
rJMFF017D23- CATTGGAAATGTTATTTGAAAGCTTGAATTCAGTGGCAGATAGAGAGGGTTGTTCACACG
rJMFF024G08- CATTGGAAATGTTATTTGAAAGCTTGAATTCAGTGGCAGATAGAGAGGGTTGTTCACACG
rJMFF013N03- CATTGGAAATGTTATTTGAAAGCTTGAATTCAGTGGCAGATAGAGAGGGTTGTTCACACG
rJMFF003F16- CATTGGAAATGTTATTTGAAAGCTTGAATTCAGTGGCAGATAGAGAGGGTTGTTCACACG
rJMFF028D13- CATTGGAAATGTTATTTGAAAGCTTGAATTCAGTGGCAGATAGAGAGGGTTGTTCACACG
rJMFF002F10- CATTGGAAATGTTATTTGAAAGCTTGAATTCAGTGGCAGATAGAGAGGGTTGTTCACACG
rJMFF033K12- CATTGGAAATGTTATTTGAAAGCTTGAATTCAGTGGCAGATAGAGAGGGTTGTTCACACG
rJMFF047M11- CATTGGAAATGTTATTTGAAAGCTTGAATTCAGTGGCAGATAGAGAGGGTTGTTCACACG
JMCP013G06+ TTGAAAGCTTGAATTCAGTGgaaGATAGAGAGGGTTGTTCACACG
JMCP011H11+ TTGAAAGCTTGAAttcagtggcagatagAGAGGGTTGTTCACACG
JMCP011D09+ ATTTGAAAGCTTGAATTCagtGGCAGATAGAGAGGGTTGTTCACACG
JMCP013H08+ ATGTTATTTGAAAGCTTGAATTCAGTGGCAGATAGAGAGGGTTGTTCACACG
JMCP013E04+ AATGTTATTTGAAAGCTTGAATTCAGTGGCAGATAGAGAGGGTTGTTCACACG
JMCP013A09+ AATGTTATTTGAAAGCTtgaatTcAGTGGCAGATAGAGAGGGTTGTTCACACG
JMCP011G02+ AAATGTTATTTGAAAGCTTGAATTCAGTGGCAGATAGAGAGGGTTGTTCACACG
JMCP011H12+ GGAAATGTTATTTGAAAGcttGAATTCAGtGGCAGATAGAGAGGGTTGTTCACACG
JMCP011H09+ GGAAATGTTATTTGAAAGCTTGAATTCAGTGGCAGATAGAGAGGGTTGTTCACACG
JMCP013B01+ TGGAAATGTTATTTGAAAGCTTGAATTCAGTGGCAGATAGAGAGGGTTGTTCACACG
JMCP012C04+ CATTGGAAATGTTATTTGAAAGCttgatttcAGTGGCAGATAGAGAGGGTTGTTCACACG
JMCP012A06+ CATTGGAAATGTTATTTGAAagctctttttcggtggcAGATAGAGAGGGTTGTTCACACG
JMCP011G01+ CATTGGAAATGTTATTTGAAAGCTTGAATTCAGTGGCAGATAGAGAGGGTTGTTCACACG
JMCP011C01+ CATTGGAAATGTTATTTGAAAGCTTGAATTCAGTGGCAGATAGAGAGGGTTGTTCACACG
JMCP004A06+ CATTGGAAATGTTATTTGAAAGCTTGAATTCAGTGGCAGATAGAGAGGGTTGTTCACACG
JMCP011F02+ CATTGGAAATGTTATTTGAAAGCTTGAATTCAGTGGCAGATAGAGAGGGTTGTTCACACG
JMCP011D02+ CATTGGAAATGTTATTTGAAAGCTTGAATTCAGTGGCAGATAGAGAGGGTTGTTCACACG
JMCP011H08+ CATTGGAAATGTTATTTGAAAGCTTGAATTCAGTGGCAGATAGAGAGGGTTGTTCACACG
JMCP011D08+ CATTGGAAATGTTATTTGAAAGCTTGAATTCAGTGGCAGATAGAGAGGGTTGTTCACACG
JMCP012E07+ ATTCAGTGGCAGATAGAGAGGGTTGTTCACACG
JMCP013E01+ GCTTGAATTCAgtgGCAGATAGAGAGGGTTGTTCACACG
JMCP013D01+ TGTTATTTGAAAGCTTGAATTCAGTGGCAGATAGAGAGGGTTGTTCACACG
JMCP011G10+ CATTGGAAATGTTATTTGAAAGCTTGAATTCAGTGGCAGATAGAGAGGGTTGTTCACACG
JMCP011B07+ CATTGGAAATATTATTTGAAAGCTTGAATTCAGTGACAGATAGAGAGGGTTGTTCACACG
JMCP011G09+ CATTGGAAATGTTATTTGAAAGCTTGAATTCAGTGGCAGATAGAGAGGGTTGTTCACACG
JMCP011F06+ CATTGGAAATGTTATTTGAAAGCTTGAATTCAGTGGCAGATAGAGAGGGTTGTTCACACG
JMCP011D03+ CATTGGAAATGTTATTTGAAAGCTTGAATTCAGTGGCAGATAGAGAGGGTTGTTCACACG
JMCP011A07+ CATTGGAAATGTTATTTGAAAGCTTGAATTCAGTGGCAGATAGAGAGGGTTGTTCACACG
JMCP011G04+ CATTGGAAATGTTATTTGAAAGCTTGAATTCAGTGGCAGATAGAGAGGGTTGTTCACACG
JMCP011F10+ CATTGGAAATGTTATTTGAAAGCTTGAATTCAGTGGCAGATAGAGAGGGTTGTTCACACG
JMCP011C02+ CATTGGAAATGTTATTTGAAAGCTTGAATTCAGTGGCAGATAGAGAGGGTTGTTCACACG
rJMFF047K23- CATTGGAAATGTTATTTGAAAGCTTGAATTCAGTGGCAGATAGAGAGGGTTGTTCACACG
JMCP013F03+ TTCAGTGGCAGATAGAGAGGGTTGTTCACACG
JMCP003C08+ CATTGGAAATGTTATTTGAAAGCTTGAATTCAGTGGCAGATAGAGAGGGTTGTTCACACG
JMCP009D06+ CATTGGAAATGTTATTTGAAAGCTTGAATTCAGTGGCAGATAGAGAGGGTTGTTCACACG
____________________________________________________________
consensus CATTGGAAATGTTATTTGAAAGCTTGAATTCAGTGGCAGATAGAGAGGGTTGTTCACACG

. : . : . : . : . : . :
rJMFF017D23- CGTAGCTGCAGAGAAGCCTTGTGTTTCATGAGAACTGTAATCATAAACCCTGAATGAACG
rJMFF024G08- CGTAGCTGCAGAGAAGCCTTGTGTTTCATGAGAACTGTAATCATAAACCCTGAATGAACG
rJMFF013N03- CGTAGCTGCAGAGAAGCCTTGTGTTTCATGAGAACTGTAATCATAAACCCTGAATGAACG
rJMFF003F16- CGTAGCTGCAGAGAAGCCTTGTGTTTCATGAGAACTGTAATCATAAACCCTGAATGAACG
rJMFF028D13- CGTAGCTGCAGAGAAGCCTTGTGTTTCATGAGAACTGTAATCATAAACCCTGAATGAACG
rJMFF002F10- CGTAGCTGCAGAGAAGCCTTGTGTTTCATGAGAACTGTAATCATAAACCCTGAATGAACG
rJMFF033K12- CGTAGCTGCAGAGAAGCCTTGTGTTTCATGAGAACTGTAATCATAAACCCTGAATGAACG
rJMFF047M11- CGTAGCTGCAGAGAAGCCTTGTGTTTCATGAGAACTGTAATCATAAACCCTGAATGAACG
JMCP013G06+ CGTAGcTGCAGAGAGGCCTTGTGTTTCATGAGAACTGTAATCATAAACCCTGAATGAACG
JMCP011H11+ CGTagcTGCagaGAGGCCTTGTgTTTCATGagAACTGTAATCATAAACCCTGAATGAACG
JMCP011D09+ CGTAGCTGCAGAGAGGCCTTGTGTTTCATGAGAACTGTAATCATAAACCCTGAATGAACG
JMCP013H08+ CGTAGCTGCAGAGAGGCCTTGTGTTTCATGAGAACTGTAATCATAAACCCTGAATGAACG
JMCP013E04+ CGTAGCTGCAGAGaGGCCTTGTGTTTCATGAGAACTGTAATCATAAACCCTGAATGAACG
JMCP013A09+ CGTAGCTGCAGAGAGGCCTTGTGTTTCATGAGAACTGTAATCATAAACCCTGAATGAACG
JMCP011G02+ CGTAGCTGCAGAGAGGCCTTGTGTTTCATGAGAACTGTAATCATAAACCCTGAATGAACG
JMCP011H12+ CGTagcTGcagaGAGGCCTTGTGTTTCATGAGAACTGTAATCATAAACCCTGAATGAACG
JMCP011H09+ CGTAGCTGCAGAGAGGCCTTGTGTTTCATGAGAACTGTAATCATAAACCCTGAATGAACG
JMCP013B01+ CGTAGCTGCAGAGAGGCCTTGTGTTTCATGAGAACTGTAATCATAAACCCTGAATGAACG
JMCP012C04+ CGTAGCTGCAGAGAGGCCTTGTGTTTCATGAGAACTGTAATCATAAACCCTGAATGAACG
JMCP012A06+ CgtatcTGCAGAGAGGCCTTGTGTTTCATGAGAACTGTAATCATAAACCCTGAATGAACG
JMCP011G01+ CGTAGCTGCAGAGAGGCCTTGTGTTTCATGAGAACTGTAATCATAAACCCTGAATGAACG
JMCP011C01+ CGTAGCTGCAGAGAGGCCTTGTGTTTCATGAGAACTGTAATCATAAACCCTGAATGAACG
JMCP004A06+ CGTAGCTGCAGAGAGGCCTTGTGTTTCATGAGAACTGTAATCATAAACCCTGAATGAACG
JMCP011F02+ CGTAGCTGCAGAGAGGCCTTGTGTTTCATGAGAACTGTAATCATAAACCCTGAATGAACG
JMCP011D02+ CGTAGCTGCAGAGAGGCCTTGTGTTTCATGAGAACTGTAATCATAAACCCTGAATGAACG
JMCP011H08+ CGTAGCTGCAGAGAGGCCTTGTGTTTCATGAGAACTGTAATCATAAACCCTGAATGAACG
JMCP011D08+ CGTAGCTGCAGAGAGGCCTTGTGTTTCATGAGAACTGTAATCATAAACCCTGAATGAACG
JMCP012E07+ CGTAGCTGCAGAGAGGCCTTGTGTTTCATGAGAACTGTAATCATAAACCCTGAATGAACG
JMCP013E01+ CGTAGCTGCAGAGAGgcCTTGTGTTTCATGAGAACTGTAATCATAAACCCTGAATGAACG
JMCP013D01+ CGTagcTGCAGAGAGGCCTTGTGTTTCATGAGAACTGTAATCATAAACCCTGAATGAACG
JMCP011G10+ CGTAGCTGCAGAGAGGCCTTGTGTTTCATGAGAACTGTAATCATAAACCCTGAATGAACG
JMCP011B07+ CGTAGCTGCAGAGAGGCCTTGTGTTTCATGAGAACTGTAATCATAAACCCTGAATGAACG
JMCP011G09+ CGTAGCTGCAGAGAGGCCTTGTGTTTCATGAGAACTGTAATCATAAACCCTGAATGAACG
JMCP011F06+ CGTAGCTGCAGAGAGGCCTTGTGTTTCATGAGAACTGTAATCATAAACCCTGAATGAACG
JMCP011D03+ CGTAGCTGCAGAGAGGCCTTGTGTTTCATGAGAACTGTAATCATAAACCCTGAATGAACG
JMCP011A07+ CGTAGCTGCAGAGAGGCCTTGTGTTTCATGAGAACTGTAATCATAAACCCTGAATGAACG
JMCP011G04+ CGTAGCTGCAGAGAGGCCTTGTGTTTCATGAGAACTGTAATCATAAACCCTGAATGAACG
JMCP011F10+ CGTAGCTGCAGAGAGGCCTTGTGTTTCATGAGAACTGTAATCATAAACCCTGAATGAACG
JMCP011C02+ CGTAGCTGCAGAGAGGCCTTGTGTTTCATGAGAACTGTAATCATAAACCCTGAATGAACG
rJMFF047K23- CGTAGCTGCAGAGAAGCCTTGTGTTTCATGAGAACTGTAATCATAAACCCTGAATGAACG
JMCP013F03+ CGTAGCTGCAGAGATGCCTTGTGTTTcaTGAGAACTGTAATCATAAACTCTgaatGAACG
JMCP003C08+ CGTAGCTGCAGAGAAGCCTTGTGTTTCATGAGAACTGTAATCATAAACCCTGAATGAACG
JMCP009D06+ CGTAGCTGCAGAGAAGCCTTGTGTTTCATGAGAACTGTAATCATAAACCCTGAATGAACG
____________________________________________________________
consensus CGTAGCTGCAGAGAGGCCTTGTGTTTCATGAGAACTGTAATCATAAACCCTGAATGAACG

. : . : . : . : . : . :
rJMFF017D23- CTTAAT
rJMFF024G08- CTTAAT
rJMFF013N03- CTTAAT
rJMFF003F16- CTTAAT
rJMFF028D13- CTTAA
rJMFF002F10- CTTAAT
rJMFF033K12- CTTAATTGTATTTAATAAAGTTCTTTGTTTCGATTTATCAATGAATTATAACCAATAAGA
rJMFF047M11- CTTAATTGTATTTAATAAAGTTCTTTGTTTCGATTTATCAATGAATTATAACCAATAAGA
JMCP013G06+ CTTAATTGTATTTAATAAAGTTCTTTGTTT
JMCP011H11+ CTTAATTGTATTTAATAAAGTTCTTTGTTTC
JMCP011D09+ CTTAATTGTATTTAATAAAGTTCTTTGTTTC
JMCP013H08+ CTTAATTGTATTTAATAaagTTCTTTGTTTC
JMCP013E04+ CTTAATTGTATTTAATAAAGTTCTTTGTTTC
JMCP013A09+ CTTAATTGTATTTAATAAAGTTCTTTGTTTC
JMCP011G02+ CTTAATTGTATTTAATAAAGTTCTTTGTTTC
JMCP011H12+ CTTAATTGTATTTAATAAAGTTCTTTGTTTC
JMCP011H09+ CTTAATTGTATTTAATAAAGTTCTTTGTTTC
JMCP013B01+ CTTAATTGTATTTAATAAAGTTCTTTGTTTC
JMCP012C04+ CTTAATTGTATTTAATAAAGTTCTTTGTTTC
JMCP012A06+ CTTAATTGTATTTA
JMCP011G01+ CTTAATTGTATTTAATAAAGTTCTTTGTTTC
JMCP011C01+ CTTAATTGTATTTAATAAAGTTCTTTGTTTC
JMCP004A06+ CTTAATTGTATTTAATAAAGTTCTTTGTTTC
JMCP011F02+ CTTAATTGTATTTAATAAAGTTCTTTGTTTC
JMCP011D02+ CTTAATTGTATTTAATAAAGTTCTTTGTTTC
JMCP011H08+ CTTAATTGTATTTAATAAAGTTCTTTGTTTC
JMCP011D08+ CTTAATTGTATTTAATAAAGTTCTTTGTTTC
JMCP012E07+ CTTAATTGTATT
JMCP013E01+ CTTAATTGTATTTAATAAAGTTCTTTG
JMCP013D01+ CTTAATTGTATTTAATAAAGTTCTTTGTTT
JMCP011G10+ CTTAATTGTATTTAAT
JMCP011B07+ CTTAATTGTATTTAATAAAGTTCTTTGTTTC
JMCP011G09+ CTTAATTGTATTTAATAAAGTTCTTTGTTTC
JMCP011F06+ CTTAATTGTATTTAATAAAGTTCTTTGTTTC
JMCP011D03+ CTTAATTGTATTTAATAAAGTTCTTTGTTTC
JMCP011A07+ CTTAATTGTATTTAATAAAGTTCTTTGTTTC
JMCP011G04+ CTTAATTGTATTTAATAAAGTTCTTTGTTTC
JMCP011F10+ CTTAATTGTATTTAATAAAGTTCTTTGTTTC
JMCP011C02+ CTTAATTGTATTTAATAAAGTTCTTTGTTTC
rJMFF047K23- CTTAATTGTATTTAATAAAGTTCTTTGTTTCGATTTATCAATGAATTATAACCAATAAGA
JMCP013F03+ CTTAATTGTATTTAATAAA
JMCP003C08+ CTTAATTGTATTTAATAAAGTTCTTTGTTTCGATT
JMCP009D06+ CTTAATTGTATTTAATAAAGTTCTTTGTTTCGATTTATCAGTGAATTATAACCAATAAGA
____________________________________________________________
consensus CTTAATTGTATTTAATAAAGTTCTTTGTTTCGATTTATCAATGAATTATAACCAATAAGA

. : . : . : . : . : . :
rJMFF033K12- T
rJMFF047M11- TTTGGTAGGAATAAGGGTTGCAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAA
rJMFF047K23- TTTGGTAGGAATAAGGGTTGC
JMCP009D06+ TTTGGTA
____________________________________________________________
consensus TTTGGTAGGAATAAGGGTTGCAAAAAAAAAAAAAAAACTCTCCAGGGTGATCCGCCATAA

. : . : . : . : . : . :
rJMFF047M11- GG
____________________________________________________________
consensus GG