Alignment Contig 12131

                          .    :    .    :    .    :    .    :    .    :    .    :

JMSF041L14+ GAATAGGGGACAGGCTAATCCTGTCACAGTAAGGAAGGAGCCCAGAGGAAGAAACTTCGT
JMFF009O09+ ATAGGGGACAGGCTAATCCTGTCACAGTAAGGAAGGAGCCCAGAGGAAGAAACTTCGT
JMFF049C19+ ATAGGGGACAGGCTAATCCTGTCACAGTAAGGAAGGAGCCCAGAGGAAGAAACTTCGT
JMFF049F12+ AGGGGACAGGCTAATCCTGTCACAGTAAGGAAGGAGCCCAGAGGAAGAAACTTCGT
JMFF046I17+ ATAGGGGACAGGCTAATCCTGTCACAGTAAGGAAGGAGCCCAGAGGAAGAAACTTCGT
JMSF036M14+ ACAGTAAGGAAGGAGCCCAGAGGAAGAAACTTCGT
____________________________________________________________
consensus GAATAGGGGACAGGCTAATCCTGTCACAGTAAGGAAGGAGCCCAGAGGAAGAAACTTCGT

. : . : . : . : . : . :
JMSF041L14+ CTTCTTTACAGCTCCAAGCTACTGCCTTTCTGTTCACATCTATCCTTCCTTCTCTTGGAA
JMFF009O09+ CTTCTTTACAGCTCCAAGCTACTGCCTTTCTGTTCACATCTATCCTTCCTTCTCTTGGAA
JMFF049C19+ CTTCTTTACAGCTCCAAGCTACTGCCTTTCTGTTCACATCTATCCTTCCTTCTCTTGGAA
JMFF049F12+ CTTCTTTACAGCTCCAAGCTACTGCCTTTCTGTTCACATCTATCCTTCCTTCTCTTGGAA
JMFF046I17+ CTTCTTTACAGCTCCAAGCTACTGCCTTTCTGTTCACATCTATCCTTCCTTCTCTTGGAA
JMSF036M14+ CTTCTTTACAGCTCCAAGCTACTGCCTTTCTGTTCACATCTATCCTTCCTTCTCTTGGAA
____________________________________________________________
consensus CTTCTTTACAGCTCCAAGCTACTGCCTTTCTGTTCACATCTATCCTTCCTTCTCTTGGAA

. : . : . : . : . : . :
JMSF041L14+ ATCAGTGGAAATGGGAGCTTCTGAAAAACCCAAAGCCCCAATCTTGCTAGGGTTGCTACT
JMFF009O09+ ATCAGTGGAAATGGGAGCTTCTGAAAAACCCAAAGCCCCAATCTTGCTAGGGTTGCTACT
JMFF049C19+ ATCAGTGGAAATGGGAGCTTCTGAAAAACCCAAAGCCCCAATCTTGCTAGGGTTGCTACT
JMFF049F12+ ATCAGTGGAAATGGGAGCTTCTGAAAAACCCAAAGCCCCAATCTTGCTAGGGTTGCTACT
JMFF046I17+ ATCAGTGGAAATGGGAGCTTCTGAAAAACCCAAAGCCCCAATCTTGCTAGGGTTGCTACT
JMSF036M14+ ATCAGTGGAAATGGGAGCTTCTGAAAAACCCAAAGCCCCAATCTTGCTAGGGTTGCTACT
JMFF041H09+ GGAAATGGGAGCTTCTGAAAAACCCAAAGCCCCAATCTTGCTAGGGTTGCTACT
JMFF031N13+ GGAAATGGGAGCTTCTGAAAAACCCAAAGCCCCAATCTTGCTAGGGTTGCTACT
JMFF050H09+ GGAAATGGGAGCTTCTGAAAAACCCAAAGCCCCAATCTTGCTAGGGTTGCTACT
____________________________________________________________
consensus ATCAGTGGAAATGGGAGCTTCTGAAAAACCCAAAGCCCCAATCTTGCTAGGGTTGCTACT

. : . : . : . : . : . :
JMSF041L14+ GTTGACTCTGCTGGAATCTGCGGCCGGGAGGTTCGTGGTGGAGAAGAACAACTTGAAGGT
JMFF009O09+ GTTGACTCTGCTGGAATCTGCGGCCGGGAGGTTCGTGGTGGAGAANAACAACTTGAAGGT
JMFF049C19+ GTTGACTCTGCTGGAATCTGCGGCCGGGAGGTTCGTGGTGGAGAAGAACAACTTGAAGGT
JMFF049F12+ GTTGACTCTGCTGGAATCTGCGGCCGGGAGGTTCGTGGTGGAGAAGAACAACTTGAAGGT
JMFF046I17+ GTTGACTCTGCTGGAATCTGCGGCCGGGAGGTTCGTGGTGGAGAAGAACAACTTGAAGGT
JMSF036M14+ GTTGACTCTGCTGGAATCTGCGGCCGGGAGGTTCGTGGTGGAGAAGAACAACTTGAAGGT
JMFF041H09+ GTTGACTCTGCTGGAATCTGCGGCCGGGAGGTTCGTGGTGGAGAAGAACAACTTGAAGGT
JMFF031N13+ GTTGACTCTGCTGGAATCTGCGGCCGGGAGGTTCGTGGTGGAGAAGAACAACTTGAAGGT
JMFF050H09+ GTTGACTCTGCTGGAATCTGCGGCCGGGAGGTTCGTGGTGGAGAAGAACAACTTGAAGGT
____________________________________________________________
consensus GTTGACTCTGCTGGAATCTGCGGCCGGGAGGTTCGTGGTGGAGAAGAACAACTTGAAGGT

. : . : . : . : . : . :
JMSF041L14+ CTTCTCCCCTGACTCCATCAAAGGAACTTACGATTCTGCTCTTGGCAACTTCGGGATTCC
JMFF009O09+ CTTCTCCCCTGACTCCATCAAAGGAACTTACGATTCTGCTCTTGG
JMFF049C19+ CTTCTCCCCTGACTCCATCAAAGGAACTTACGATTCTGCTCTTGGCAACTTCGGGATTCC
JMFF049F12+ CTTCTCCCCTGACTCCATCAAAGGAACTTACGATTCTGCTCTTGGCAACTTCGGGATTCC
JMFF046I17+ CTTCTCCCCTGACTCCATCAAAGGAACTTACGATTCTGCTCTTGGCAACTTCGGGATTCC
JMSF036M14+ CTTCTCCCCTGACTCCATCAAAGGAACTTACGATTCTGCTCTTGGCAACTTCGGGATTCC
JMFF041H09+ CTTCTCCCCTGACTCCATCAAAGGAACTTACGATTCTGCTCTTGGCAACTTCGGGATTCC
JMFF031N13+ CTTCTCCCCTGACTCCATCAAAGGAACTTACGATTCTGCTCTTGGCAACTTCGGGATTCC
JMFF050H09+ CTTCTCCCCTGACTCCATCAAAGGAACTTACGATTCTGCTCTTGGCAACTTCGGGATTCC
____________________________________________________________
consensus CTTCTCCCCTGACTCCATCAAAGGAACTTACGATTCTGCTCTTGGCAACTTCGGGATTCC

. : . : . : . : . : . :
JMSF041L14+ TCAGTATGGCGGCAGCATGACTGGGACTGTGGTCTACCCAAAGGATAATCGAAAGGGGTG
JMFF049C19+ TCAGTATGGCGGAAGCATGACTGGGACTGTGGTCTACCCAAAGGATAATCGAAAGGGGTG
JMFF049F12+ TCAGTATGGCGGCAGCATGACTGGGACTGTGGTCTACCCAAAGGATAATCGAAAGGGGTG
JMFF046I17+ TCAGTATGGCGGCAGCATGACTGGGACTGTGGTCTACCCAAAGGATAATCGAAAGGGGTG
JMSF036M14+ TCAGTATGGCGGCAGCATGACTGGGACTGTGGTCTACCCAAAGGATAATCGAAAGGGGTG
JMFF041H09+ TCAGTATGGCGGCAGCATGACTGGGACTGTGGTCTACCCAAAGGATAATCGAAAGGGGTG
JMFF031N13+ TCAGTATGGCGGCAGCATGACTGGGACTGTGGTCTACCCAAAGGATAATCGAAAGGGGTG
JMFF050H09+ TCAGTATGGCGGCAGCATGACTGGGACTGTGGTCTACCCAAAGGATAATCGAAAGGGGTG
____________________________________________________________
consensus TCAGTATGGCGGCAGCATGACTGGGACTGTGGTCTACCCAAAGGATAATCGAAAGGGGTG

. : . : . : . : . : . :
JMSF041L14+ TAAGGGCTTTGATGGTTTTGGGATTTCTTTCAGTTCCAAGGCCGGTTCCTTGCCCACCTT
JMFF049C19+ TAAGGGCTTTGATGGTTTTGGGATTTCTTTCAGTTCCAAGGCCGGTTCCTTGCCCACCTT
JMFF049F12+ TAAGGGCTTTGATGGTTTTGGGATTTCTTTCAGTTCCAAGGCCGGTTCCTTGCCCACCTT
JMFF046I17+ TAAGGGCTTTGATGGTTTTGGGATTTCTTTCAGTTCCAAGGCCGGTTCCTTGCCCACCTT
JMSF036M14+ TAAGGGCTTTGATGGTTTTGGGATTTCTTTCAGTTCCAAGGCCGGTTCCTTGCCCACCTT
JMFF041H09+ TAAGGGCTTTGATGGTTTTGGGTTTTCTTTCAGTTCCAAGGCCGGTTCCTTGCCCACCTT
JMFF031N13+ TAAGGGCTTTGATGGTTTTGGGTTTTCTTTCAGTTCCAAGGCCGGTTCCTTGCCCACCTT
JMFF050H09+ TAAGGGCTTTGATGGTTTTGGGTTTTCTTTCAGTTCCAAGGCCGGTTCCTTGCCCACCTT
____________________________________________________________
consensus TAAGGGCTTTGATGGTTTTGGGATTTCTTTCAGTTCCAAGGCCGGTTCCTTGCCCACCTT

. : . : . : . : . : . :
JMSF041L14+ TGTTATCGTCGATCGCGGAGATTGCCGTTTTGCGTTGAAGGCCTGGAATGCTCAGAATGC
JMFF049C19+ TGTTATCGTCGATCGCGGAGATTGCCGTTTTGCGTTGAAGGCCTGGAATGCTC
JMFF049F12+ TGTTATCGTCGATCGCGGAGATTGCCGTTTTGCGTTGAAGGCCTGGAATGCTCAGAATGC
JMFF046I17+ TGTTATCGTCGATCGCGGAGATTGCCGTTTTGCGTTGAAGGCCTGGAATGCTCAGAATGC
JMSF036M14+ TGTTATCGTCGATCGCGGAGATTGCCGTTTTGCGTTGAAGGCCTGGAATGCTCAGAATGC
JMFF041H09+ TGTTATCGTCGATCGCGGAGATTGCCGTTTTGCGTTGAAGGCCTGGAATGCTCAGAATGC
JMFF031N13+ TGTTATCGTCGATCGCGGAGATTGCCGTTTTGCGTTGAAGGCCTGGAATGCTCAGAATGC
JMFF050H09+ TGTTATCGTCGATCGCGGAGATTGCCGTTTTGCGTTGAAGGCCTGGAATGCTCAGAATGC
____________________________________________________________
consensus TGTTATCGTCGATCGCGGAGATTGCCGTTTTGCGTTGAAGGCCTGGAATGCTCAGAATGC

. : . : . : . : . : . :
JMSF041L14+ TGGTGCTTCAGCGATCTTAGTTGCGGATGATGTTGAGGAAAGGTTGATAACCATGGACTC
JMFF049F12+ TGGTGCTTCAGCGATCTTAGTTGCGGATGATGTTGAGGAAAGGTTGATAACCATGGACTC
JMFF046I17+ TGGTGCTTCAGCGATCTTAGTTGCGGATGATGTTGAGGAAAGGTTGATAACCATGGACTC
JMSF036M14+ TGGTGCTTCAGCGATCTTAGTTGCGGATGATGTTGAGGAAAGGTTGATAACCATGGACTC
JMFF041H09+ TGGTGCTTCAGCGATCTTAGTTGCGGATGATGTTGAGGAAAGGTTGATAACCATGGACTC
JMFF031N13+ TGGTGCTTCAGCGATCTTAGTTGCGGATGATGTTGAGGAAAGGTTGATAACCATGGACTC
JMFF050H09+ TGGTGCTTCAGCGATCTTAGTTGCGGATGATGTTGAGGAAAGGTTGATAACCATGGACTC
____________________________________________________________
consensus TGGTGCTTCAGCGATCTTAGTTGCGGATGATGTTGAGGAAAGGTTGATAACCATGGACTC

. : . : . : . : . : . :
JMSF041L14+ TCCTGAAGAGGATGGTTCTTCTTCGAATTACGTGGAGAACATAACGATTCCGTCTGCTCT
JMFF049F12+ TCCTGAAGAGGATGGTTCTTCTTCGAATTACGTGGAGAACATAACGATTCCGTCTGCTCT
JMFF046I17+ TCCTGAAGAGGATGGTTCTTCTTCGAATTACGTGGAGAACATAACGATTCCGTCTGCTCT
JMSF036M14+ TCCTGAAGAGGATGGTTCTTCTTCGAATTACGTGGAGAACATAACGATTCCGTCTGCTCT
JMFF041H09+ TCCTGAAGAGGATGGTTCTTCTTCGAATTACGTGGAGAACATAACGATTCCGTCTGCTCT
JMFF031N13+ TCCTGAAGAGGATGGTTCTTCTTCGAATTACGTGGAGAACATAACGATTCCGTCTGCTCT
JMFF050H09+ TCCTGAAGAGGATGGTTCTTCTTCGAATTACGTGGAGAACATAACGATTCCGTCTGCTCT
____________________________________________________________
consensus TCCTGAAGAGGATGGTTCTTCTTCGAATTACGTGGAGAACATAACGATTCCGTCTGCTCT

. : . : . : . : . : . :
JMSF041L14+ TATTGAGAAAAGTTTTGGGGAGAAGTTGAAGAAGGCGGTCAAGGATGGGGAAATGGTTCA
JMFF049F12+ TATTGAGAAAAGTTTTGGG
JMFF046I17+ TATTGAGAAAAGTTTTGGG
JMSF036M14+ TATTGAGAAAAGTTTTGGGGAGAAGTTGAAGAAGGCGGTCAAGG
JMFF041H09+ TATTGAGAAAAGTTTTGGGGAGAAGTTGAAGAAGGCGGTCAAGGATGGGGAAATGGTTCA
JMFF031N13+ TATTGAGAAAAGTTTTGGGGAGAAGT
JMFF050H09+ TATTGAGAAAAGTTTTGGGGAGAAGTTGAAGAAGGCGGTCAAGGATGGGGAAATGGTTCA
____________________________________________________________
consensus TATTGAGAAAAGTTTTGGGGAGAAGTTGAAGAAGGCGGTCAAGGATGGGGAAATGGTTCA

. : . : . : . : . : . :
JMSF041L14+ TGTAAATCTTGATTGGAGAGAANCTGTCCCTCATCCCGATGATAGGGTGGAATATGAGCT
JMFF041H09+ TGTAAATCTTGATTGGAGAGAAGCTGTCCCTCATCCCGATGATAGGGTGGAATATGAGCT
JMFF050H09+ TGTAAATCTTGATTGGAGAGAAGCTGTCCCTCATCCCGATGATAGGGTGGAATATGAGCT
____________________________________________________________
consensus TGTAAATCTTGATTGGAGAGAAGCTGTCCCTCATCCCGATGATAGGGTGGAATATGAGCT

. : . : . : . : . : . :
JMSF041L14+ ATGGACTAACANCAATGAC
JMFF041H09+ ATGGACTAACAGCAATGACGAGTGTGGGTATAAGTGTGACATGCTGATGAAGT
JMFF050H09+ ATGGAC
____________________________________________________________
consensus ATGGACTAACAGCAATGACGAGTGTGGGTATAAGTGTGACATGCTGATGAAGT