Alignment Contig 11899

                          .    :    .    :    .    :    .    :    .    :    .    :

JMSF005K04+ GGAAAAAAAAAAGTTTCCTTCTTTGTGTTCAGTGGCCCCCACTAGGGAATGCAGAGAGAT
JMSF015F08+ AGTTTCCTTCTTTGTGTTCAGTGGCCCCCACTAGGGAATGCAGAGAGAT
JMFF012G02+ AGTTTCCTTCTTTGTGTTCAGTGGCCCCCACTAGGGAATGCAGAGAGAT
____________________________________________________________
consensus GGAAAAAAAAAAGTTTCCTTCTTTGTGTTCAGTGGCCCCCACTAGGGAATGCAGAGAGAT

. : . : . : . : . : . :
JMSF005K04+ GAAATATTTTCCGGTTGCTAACCCGCTCGTCGGCGCCGGGAGACCCCACAAACTACCGCA
JMSF015F08+ GAAATATTTTCCGGTTGCTAACCCGCTCGTCGGCGCCGGGAGACCCCACAAACTACCGCA
JMFF012G02+ GAAATATTTTCCGGTTGCTAACCCGCTCGTCGGCGCCGGGAGACCCCACAAACTACCGCA
____________________________________________________________
consensus GAAATATTTTCCGGTTGCTAACCCGCTCGTCGGCGCCGGGAGACCCCACAAACTACCGCA

. : . : . : . : . : . :
JMSF005K04+ CATCGGCGGCAGGAATTGTCACCGGAAACACGTCGAANACGG
JMSF015F08+ CATCGGCGGCAGGAATTGTCACCGGAAACACGTCGAAGACGG
JMFF012G02+ CATCGGCGGCAGGAATTGTCACCGGAAACACGTCGAAGACGGGTGAATACCTACAATCTA
____________________________________________________________
consensus CATCGGCGGCAGGAATTGTCACCGGAAACACGTCGAAGACGGGTGAATACCTACAATCTA

. : . : . : . : . : . :
JMFF012G02+ TTTTGCTTCCTACATCTCCTAATCCTCTGTTTTATAGCCTTTTATTGTTCCCAAAATTAA
____________________________________________________________
consensus TTTTGCTTCCTACATCTCCTAATCCTCTGTTTTATAGCCTTTTATTGTTCCCAAAATTAA

. : . : . : . : . : . :
JMFF012G02+ ACACTCAAATTAGCTTTGAAAGGAGTAACGAATAGAGAAGGAAAAAAATTCAAAATTGGA
JMSF038N22+ GCTTTGAAAGGAGTAACGAATAGAGAAGGAAAAAAATTCAAAATTGGA
____________________________________________________________
consensus ACACTCAAATTAGCTTTGAAAGGAGTAACGAATAGAGAAGGAAAAAAATTCAAAATTGGA

. : . : . : . : . : . :
JMFF012G02+ ATCTGAAATGGCGGCCGAGGAAAAATGCAGTGTTTTGCACGGGAAATACGAGCTGGGGCG
JMSF038N22+ ATCTGAAATGGCGGCCGAGGAAAAATGCAGTGTTTTGCACGGGAAATACGAGCTGGGGCG
____________________________________________________________
consensus ATCTGAAATGGCGGCCGAGGAAAAATGCAGTGTTTTGCACGGGAAATACGAGCTGGGGCG

. : . : . : . : . : . :
JMFF012G02+ GTTTCTAGGCCATGGAACCTTCGCGAAGGTGTACCACGCGCGGAACGTGCACACGGGGAA
JMSF038N22+ GTTTCTAGGCCATGGAACCTTCNCGAAGGTGTACCACGCGCGGAACGTGCACACGGGGAA
____________________________________________________________
consensus GTTTCTAGGCCATGGAACCTTCGCGAAGGTGTACCACGCGCGGAACGTGCACACGGGGAA

. : . : . : . : . : . :
JMFF012G02+ GAGCTCGGCGATGAAGGTCGTGGGGAAG
JMSF038N22+ NAGCTCGGCGATGAAGGTCGTGGGGAAGGANAAGGTGGTGAAGGCCGGGATGATGGAACA
____________________________________________________________
consensus GAGCTCGGCGATGAAGGTCGTGGGGAAGGANAAGGTGGTGAAGGCCGGGATGATGGAACA

. : . : . : . : . : . :
JMSF038N22+ GATAAAGCGCGAAATCTCCGTCATGAGTATGGTGAAGCACCACAACATCGTCGAACTCTA
____________________________________________________________
consensus GATAAAGCGCGAAATCTCCGTCATGAGTATGGTGAAGCACCACAACATCGTCGAACTCTA

. : . : . : . : . : . :
JMSF038N22+ CGAGGTCATGGCGAGCAAGACGAAGATTTACTTCGCCATGGAGCTCGTCCGCGGCGGCGA
____________________________________________________________
consensus CGAGGTCATGGCGAGCAAGACGAAGATTTACTTCGCCATGGAGCTCGTCCGCGGCGGCGA

. : . : . : . : . : . :
JMSF038N22+ GCTGTTCGCGAAGATCTCAAAGGGGCGGTTACGCGAGGAATTGGCGAGGAATTACTTCCA
____________________________________________________________
consensus GCTGTTCGCGAAGATCTCAAAGGGGCGGTTACGCGAGGAATTGGCGAGGAATTACTTCCA

. : . : . : . : . : . :
JMSF038N22+ GCAGTTGATTTCCGCGGTTGATTTCTGCCACAGCCGCGGGGTTTACCACAGGGAC
____________________________________________________________
consensus GCAGTTGATTTCCGCGGTTGATTTCTGCCACAGCCGCGGGGTTTACCACAGGGAC