Alignment Contig 11752

                          .    :    .    :    .    :    .    :    .    :    .    :

JMFS026H08+ TTGAGAGGCGGGTTGAAAAAAAGATCCCTTAAGCCGTAAGAAAACTGAGGACTTGCAGTC
____________________________________________________________
consensus TTGAGAGGCGGGTTGAAAAAAAGATCCCTTAAGCCGTAAGAAAACTGAGGACTTGCAGTC

. : . : . : . : . : . :
JMFS026H08+ GTAATCACTAATCACCATATCGTTTCTTCTTGTTGGCACCTTCGTCGGACGCGTCTACTC
JMFF020F07+ GTAATCACTAATCACCATATCGTTTCTTCTTGTTGGCACCTTCGTCGGACGCGTCTACTC
JMFF010H15+ GTTGGCACCTTCGTCGGACGCGTCTACTC
____________________________________________________________
consensus GTAATCACTAATCACCATATCGTTTCTTCTTGTTGGCACCTTCGTCGGACGCGTCTACTC

. : . : . : . : . : . :
JMFS026H08+ CGTTTCTCATCATTCCCTTATAAACCAGTCTGAATCGCTATAGTTTTCGTGACCAATTTG
JMFF020F07+ CGTTTCTCATCATTCCCTTATAAACCAGTCTGAATCGCTATAGTTTTCGTGACCAATTTG
JMFF010H15+ CGTTTCTCATCATTCCCTTATAAACCAGTCTGAATCGCTATAGTTTTCGTGACCAATTTG
JMFF022J11+ GTGACCAATTTG
JMFF024M07+ AATTTG
JMFF011C04+ AATTTG
____________________________________________________________
consensus CGTTTCTCATCATTCCCTTATAAACCAGTCTGAATCGCTATAGTTTTCGTGACCAATTTG

. : . : . : . : . : . :
JMFS026H08+ CTTCCAAGACGCGCTCATAGAAACGAGATGGATTCCTTCTTCAACAAAGGCTTCAAAGCT
JMFF020F07+ CTTCCAAGACGCGCTCATAGAAACGAGATGGATTCCTTCTTCAACAAAGGCTTCAAAGCT
JMFF010H15+ CTTCCAAGACGCGCTCATAGAAACGAGATGGATTCCTTCTTCAACAAAGGCTTCAAAGCT
JMFF022J11+ CTTCCAAGACGCGCTCATAGAAACGAGATGGATTCCTTCTTCAACAAAGGCTTCAAAGCT
JMFF024M07+ CTTCCAAGACGCGCTCATAGAAACGAGATGGATTCCTTCTTCAACAAAGGCTTCAAAGCT
JMFF011C04+ CTTCCAAGACGCGCTCATAGAAACGAGATGGATTCCTTCTTCAACAAAGGCTTCAAAGCT
____________________________________________________________
consensus CTTCCAAGACGCGCTCATAGAAACGAGATGGATTCCTTCTTCAACAAAGGCTTCAAAGCT

. : . : . : . : . : . :
JMFS026H08+ GCCAAATGTAAAACTCTATTGAAGCTGACGATCCCTCGGATAAAGCTATTGAGAAACCGT
JMFF020F07+ GCCAAATGTAAAACTCTATTGAAGCTGACGATCCCTCGGATAAAGCTATTGAGAAACCGT
JMFF010H15+ GCCAAATGTAAAACTCTATTGAAGCTGACGATCCCTCGGATAAAGCTATTGAGAAACCGT
JMFF022J11+ GCCAAATGTAAAACTCTATTGAAGCTGACGATCCCTCGGATAAAGCTATTGAGAAACCGT
JMFF024M07+ GCCAAATGTAAAACTCTATTGAAGCTGACGATCCCTCGGATAAAGCTATTGAGAAACCGT
JMFF011C04+ GCCAAATGTAAAACTCTATTGAAGCTGACGATCCCTCGGATAAAGCTATTGAGAAACCGT
____________________________________________________________
consensus GCCAAATGTAAAACTCTATTGAAGCTGACGATCCCTCGGATAAAGCTATTGAGAAACCGT

. : . : . : . : . : . :
JMFS026H08+ AGAGAGATTCAGCTGAAGCAGATGCGGAAAGAAATTGCCAAGCTTCTTGAAACTGGTCAG
JMFF020F07+ AGAGAGATTCAGCTGAAGCAGATGCGGAAAGAAATTGCCAAGCTTCTTGAAACTGGTCAG
JMFF010H15+ AGAGAGATTCAGCTGAAGCAGATGCGGAAAGAAATTGCCAAGCTTCTTGAAACTGGTCAG
JMFF022J11+ AGAGAGATTCAGCTGAAGCAGATGCGGAAAGAAATTGCCAAGCTTCTTGAAACTGGTCAG
JMFF024M07+ AGAGAGATTCAGCTGAAGCAGATGCGGAAAGAAATTGCCAAGCTTCTTGAAACTGGTCAG
JMFF011C04+ AGAGAGATTCAGCTGAAGCAGATGCGGAAAGAAATTGCCAAGCTTCTTGAAACTGGTCAG
____________________________________________________________
consensus AGAGAGATTCAGCTGAAGCAGATGCGGAAAGAAATTGCCAAGCTTCTTGAAACTGGTCAG

. : . : . : . : . : . :
JMFS026H08+ GAAGCCACTGCTCGGATTCGGGTGGAGCATATTATAAGAGAGGAGAAAATGATGGCTGCC
JMFF020F07+ GAAGCCACTGCTCGGATTCGGGTGGAGCATATTATAAGAGAGGAGAAAATGATGGCTGCC
JMFF010H15+ GAAGCCACTGCTCGGATTCGGGTGGAGCATATTATAAGAGAGGAGAAAATGATGGCTGCC
JMFF022J11+ GAAGCCACTGCTCGGATTCGGGTGGAGCATATTATAAGAGAGGAGAAAATGATGGCTGCC
JMFF024M07+ GAAGCCACTGCTCGGATTCGGGTGGAGCATATTATAAGAGAGGAGAAAATGATGGCTGCC
JMFF011C04+ GAAGCCACTGCTCGGATTCGGGTGGAGCATATTATAAGAGAGGAGAAAATGATGGCTGCC
____________________________________________________________
consensus GAAGCCACTGCTCGGATTCGGGTGGAGCATATTATAAGAGAGGAGAAAATGATGGCTGCC

. : . : . : . : . : . :
JMFS026H08+ CAGGAGATAATTGAGCTATTTTGTGAGCTCATAAGTGTTCGTCTTCCAATAATTGAGGCA
JMFF020F07+ CAGGAGATAATTGAGCTATTTTGTGAGCTCATAAGTGTTCGTCTTCCAATAATTGAGGCA
JMFF010H15+ CAGGAGATAATTGAGCTATTTTGTGAGCTCATAAGTGTTCGTCTTCCAATAATTGAGGCA
JMFF022J11+ CAGGAGATAATTGAGCTATTTTGTGAGCTCATAAGTGTTCGTCTTCCAATAATTGAGGCA
JMFF024M07+ CAGGAGATAATTGAGCTATTTTGTGAGCTCATAAGTGTTCGTCTTCCAATAATTGAGGCA
JMFF011C04+ CAGGAGATAATTGAGCTATTTTGTGAGCTCATAAGTGTTCGTCTTCCAATAATTGAGGCA
____________________________________________________________
consensus CAGGAGATAATTGAGCTATTTTGTGAGCTCATAAGTGTTCGTCTTCCAATAATTGAGGCA

. : . : . : . : . : . :
JMFS026H08+ CAAAGGGAATGCCCCCTGGATTTGAAAGAAGCAATTTCCAGTGTATGTTTTGCTGCACCA
JMFF020F07+ CAAAGGGAATGCCCCCTGGATTTGAAAGAAGCAATTTCCAGTGTATGTTTTGCTGCACCA
JMFF010H15+ CAAAGGGAATGCCCCCTGGATTTGAAAGAAGCAATTTCCAGTGTATGTTTTGCTGCACCA
JMFF022J11+ CAAAGGGAATGCCCCCTGGATTTGAAAGAAGCAATTTCCAGTGTATGTTTTGCTGCACCA
JMFF024M07+ CAAAGGGAATGCCCCCTGGATTTGAA-GAAGCAATTTCCAGTGTATGTTTTGCTGCACCA
JMFF011C04+ CAAAGGGAATGCCCCCTGGATTTGAA-GAAGCAATTTCCAGTGTATGTTTTGCTGCACCA
____________________________________________________________
consensus CAAAGGGAATGCCCCCTGGATTTGAAAGAAGCAATTTCCAGTGTATGTTTTGCTGCACCA

. : . : . : . : . : . :
JMFS026H08+ AGATGTGCCGATCTTCCAGAGTTGCAGCAGGTTCAACTGGCTGTTACTGGTAAATATGGA
JMFF020F07+ AGATGTGCCGATCTTC
JMFF010H15+ AGATGTGCCGATCTTCCAGAGTTGCAGCAGGTTCAACTGGCTTTTACTGGTAAATATGGA
JMFF022J11+ AGATGTGCCGATCTTCCAGAGTTGCAGCAGGTTCAACTGGCTTTTACTGGTAAATATGGA
JMFF024M07+ AGATGTGCCGATCTTCCAGAGTTGCAGCAGGTTCAACTGGCTTTTACTGGTAAATATGGA
JMFF011C04+ AGATGTGCCGATCTTCCAGAGTTGCAGCAGGTTCAACTGGCTTTTACTGGTAAATATGGA
____________________________________________________________
consensus AGATGTGCCGATCTTCCAGAGTTGCAGCAGGTTCAACTGGCTTTTACTGGTAAATATGGA

. : . : . : . : . : . :
JMFS026H08+ AAAGAATTTGTTGCTG
JMFF010H15+ AAAGAATTTGTTGCTGCTGCCAC
JMFF022J11+ AAAGAATTTGTTGCTGCTGCCACAGAGCTTAGGCCTGAATGTGGTGTCAATCGCCAGTTG
JMFF024M07+ AAAGAATTTGTTGCTGCTGCCAC
JMFF011C04+ AAAGAATTTGTTGCTGCTGCCACAGAGCTTAGGCCTGAATGTGGTGTCAATCGCCAGTTG
____________________________________________________________
consensus AAAGAATTTGTTGCTGCTGCCACAGAGCTTAGGCCTGAATGTGGTGTCAATCGCCAGTTG

. : . : . : . : . : . :
JMFF022J11+ ATAGAGCTGCTTTCTATTCGTGCTCCTGCTCCTGATGTGAA
JMFF011C04+ ATAGAGCTGCTTTCTATTCGTGCTCCTGCTCCTGATGTGAAACTGAAGGTCCTGAAGGAA
____________________________________________________________
consensus ATAGAGCTGCTTTCTATTCGTGCTCCTGCTCCTGATGTGAAACTGAAGGTCCTGAAGGAA

. : . : . : . : . : . :
JMFF011C04+ ATTGCTGAGGAGCATGAGCTAGA
____________________________________________________________
consensus ATTGCTGAGGAGCATGAGCTAGA