Alignment Contig 11470

                          .    :    .    :    .    :    .    :    .    :    .    :

JMFF004G17+ AGGCTTTAGCCCAAATCCATGCCTGCCTGCCTGCCTACCTACCAGGCCGGCACCCGGGTA
____________________________________________________________
consensus AGGCTTTAGCCCAAATCCATGCCTGCCTGCCTGCCTACCTACCAGGCCGGCACCCGGGTA

. : . : . : . : . : . :
JMFF004G17+ CCAATCTACCACGACCGGCCTACCAACTAAGGCAATGCTGCAACGATGAAGAGAAGTCAT
____________________________________________________________
consensus CCAATCTACCACGACCGGCCTACCAACTAAGGCAATGCTGCAACGATGAAGAGAAGTCAT

. : . : . : . : . : . :
JMFF004G17+ TAACGTTAGTCAAAGCAGCCAACTACCTTGTTTTCCGGGTCCCTCACTTTCCTCGTTTCT
JMSF028I24+ TTTTCCGGGTCCCTCACTTTCCTCGTTTCT
JMFF010P18+ TTTTCCGGGCCCCTCACTTTCCTCGTTTCT
____________________________________________________________
consensus TAACGTTAGTCAAAGCAGCCAACTACCTTGTTTTCCGGGTCCCTCACTTTCCTCGTTTCT

. : . : . : . : . : . :
JMFF004G17+ ATTTTCTAATCTCCATAACAGATCAATCTCGATGGGTTCTGTTTAGTTTCCTCAATTACT
JMSF028I24+ ATTTTCTAATCTCCATAACAGATCAATCTCGATGGGTTCTGNTTAGTTTCCTCAATTACT
JMFF010P18+ ATTTTCTAATCTCCATAACAGATCAATCTCGATGGGTTCTGTTTAGTTTCCTCAATTACT
JMSF025A16+ GATGGGTTCTGTTTAGTTTCCTCAATTACT
____________________________________________________________
consensus ATTTTCTAATCTCCATAACAGATCAATCTCGATGGGTTCTGTTTAGTTTCCTCAATTACT

. : . : . : . : . : . :
JMFF004G17+ CCCCAATTCGGTCTTTAATATTCCATCAATTCTTGAACAGAATCGGCGGAATAATGGGCC
JMSF028I24+ CCCCAATTCGGTCTTTAATATTCCATCAATTCTTGAACAGAATCGGCGGAATAATGGGCC
JMFF010P18+ CCCCAATTCGGTCTTTAATATTCCATCAATTCTTGAACAGAATCGGCGGAATAATGGGCC
JMSF025A16+ CCCCAATTCGGTCTTTAATATTCCATCAATTCTTGAACAGAATCGGCGGAATAATGGGCC
JMSF022E23+ GGCGGAATAATGGGCC
____________________________________________________________
consensus CCCCAATTCGGTCTTTAATATTCCATCAATTCTTGAACAGAATCGGCGGAATAATGGGCC

. : . : . : . : . : . :
JMFF004G17+ AAGACGAGGCCTTTCTCCTTGAGGGTCAATCCCAGAAGGAGAGGAAGTCAAATGATTGGA
JMSF028I24+ AAGACGAGGCCTTTCTCCTTGAGGGTCAATCCCANAAGGAGAGGAAGTCAAATGATTGGA
JMFF010P18+ AAGACGAGGCCTTTCTCCTTGAGGGTCAATCCCAGAAGGAGAGGAAGTCAAATGATTGGA
JMSF025A16+ AAGACGAGGCCTTTCTCCTTGAGGGTCAATCCCAGAAGGAGAGGAAGTCAAATGATTGGA
JMSF022E23+ AAGACGAGGCCTTTCTCCTTGAGGGTCAATCCCAGAAGGAGAGGAAGTCAAATGATTGGA
____________________________________________________________
consensus AAGACGAGGCCTTTCTCCTTGAGGGTCAATCCCAGAAGGAGAGGAAGTCAAATGATTGGA

. : . : . : . : . : . :
JMFF004G17+ CTTGGAGGTGGAGGTGGAGGCCGTTTGATTGGTTTAGGAAGCTCAGTGATGTTCTGCATT
JMSF028I24+ CTTGGAGGTGGAGGTGGAGGCCGTTTGATTGGTTTANGAAGCTCACTGATGTTCTGCATT
JMFF010P18+ CTTGGAGGTGGAGGTGGAGGCCGTTTGATTGGTTTAGGAAGCTCAGTGATGTTCTGCATT
JMSF025A16+ CTTGGAGGTGGAGGTGGAGGCCGTTTGATTGGTTTAGGAAGCTCAGTGATGTTCTGCATT
JMSF022E23+ CTTGGAGGTGGAGGTGGAGGCCGTTTGATTGGTTTAGGAAGCTCAGTGATGTTCTGCATT
____________________________________________________________
consensus CTTGGAGGTGGAGGTGGAGGCCGTTTGATTGGTTTAGGAAGCTCAGTGATGTTCTGCATT

. : . : . : . : . : . :
JMFF004G17+ GGAGCTTTGTTTTGTCAGTGGTGATTGTTTATGGAATCAATCAAGGGTTGAGTTTGGGTT
JMSF028I24+ GGAGCTTTGTTTTGTCAGTGGTGATTGTTTATGGAATCAATCAAGGGTTGAGTTTGGGTT
JMFF010P18+ GGAGCTTTGTTTTGTCAGTGGTGATTGTTTATGGAATCAATCAAGGGTTGAGTTTGGGTT
JMSF025A16+ GGAGCTTTGTTTTGTCAGTGGTGATTGTTTATGGAATCAATCAAGGGTTGAGTTTGGGTT
JMSF022E23+ GGAGCTTTGTTTTGTCAGTGGTGATTGTTTATGGAATCAATCAAGGGTTGAGTTTGGGTT
____________________________________________________________
consensus GGAGCTTTGTTTTGTCAGTGGTGATTGTTTATGGAATCAATCAAGGGTTGAGTTTGGGTT

. : . : . : . : . : . :
JMFF004G17+ TGAGTCGGATTAGTATTCAGTACTATATGAAGGATGAGCAAAAGCTACAGCCCTCTGAAG
JMSF028I24+ TGAGTCNGATTAGTATTCAGTACTATATGAAGGATGAGCAAAAGCTACAGCCCTCTGAAG
JMFF010P18+ TGAGTCGGATTAGTATTCAGTACTATATGAAGGATGAGCAAAAGCTACAGCCCTCTGAAG
JMSF025A16+ TGAGTCGGATTAGTATTCAGTACTATATGAAGGATGAGCAAAAGCTACAGCCCTCTGAAG
JMSF022E23+ TGAGTCGGATTAGTATTCAGTACTATATGAAGGATGAGCAAAAGCTACAGCCCTCTGAAG
____________________________________________________________
consensus TGAGTCGGATTAGTATTCAGTACTATATGAAGGATGAGCAAAAGCTACAGCCCTCTGAAG

. : . : . : . : . : . :
JMFF004G17+ CTCAGATTTTTACTGGAATTATATCTCTCCCTTGGAT
JMSF028I24+ CTCANATTTTTACTGGAATTATATCTCTCCCNTGGATTGTTAAGCCTCTCTGGGGTTTGC
JMFF010P18+ CTCAGATTTTTACTGGAATTATATCTCTCCCTTGGATTGTTAAGCCTCTCTGGGGTTTGC
JMSF025A16+ CTCAGATTTTTACTGGAATTATATCTCTCCCTTGGATTGTTAAGCCTCTCTGGGGTTTGC
JMSF022E23+ CTCAGATTTTTACTGGAATTATATCTCTCCCTTGGATTGTTAAGCCTCTCTGGGGTTTGC
____________________________________________________________
consensus CTCAGATTTTTACTGGAATTATATCTCTCCCTTGGATTGTTAAGCCTCTCTGGGGTTTGC

. : . : . : . : . : . :
JMSF028I24+ TTACTGATGTTCTTCCCATTGCTGGATATA
JMFF010P18+ TTACTGATGTTCTTCCCATTGCTGGATATAGAAGAAGGCCTTACTTCATTCTTGCTGGT
JMSF025A16+ TTACTGATGTTCTTCCCATTGCTGGATATAGAAGAAGGCCTTACTTCATTCTTGCTGGTT
JMSF022E23+ TTACTGATGTTCTTCCCATTGCTGGATATAGAAGAAGGCCTTACTTCATTCTTGCTGGTT
____________________________________________________________
consensus TTACTGATGTTCTTCCCATTGCTGGATATAGAAGAAGGCCTTACTTCATTCTTGCTGGTT

. : . : . : . : . : . :
JMSF025A16+ CCCTCGGTGTCATTGCCATGCTTACCCTATCGATGAACCAATTACGGATCGAACTTGCTT
JMSF022E23+ CCCTCGGTGTCATTGCCATGCTTACCCTATCGATGAACCAATTACGGATCGAACTTGCTT
____________________________________________________________
consensus CCCTCGGTGTCATTGCCATGCTTACCCTATCGATGAACCAATTACGGATCGAACTTGCTT

. : . : . : . : . : . :
JMSF025A16+ TGTTATGCTTAATGGCTGGCAGTGCTGGGGTTGCAATAGCGGATGTGATTATCGATGCCT
JMSF022E23+ TGTTATGCTTAATGGCTGGCAGTGCTGGGGTTGCAATAGCGGATGTGATTATCGATGCCT
____________________________________________________________
consensus TGTTATGCTTAATGGCTGGCAGTGCTGGGGTTGCAATAGCGGATGTGATTATCGATGCCT

. : . : . : . : . : . :
JMSF025A16+ GTGTAACCGAGAACAGCATAAGCCATCCGTCTCTGGCTGGTGACATGCAAAGCTTATGCG
JMSF022E23+ GTGTAACCGAGAACAGCATAAGCCATCCGTCTCTGGCTGGTGACATGCAAAGCTTATGCG
____________________________________________________________
consensus GTGTAACCGAGAACAGCATAAGCCATCCGTCTCTGGCTGGTGACATGCAAAGCTTATGCG

. : . : . : . : . : . :
JMSF025A16+ GAGGGAGCTCTTCGGTTGGACANCTAATTGGGTATATGATCAGTGG
JMSF022E23+ GAGGGAGCTCTTCGGTTGGACAACTAATTGGGTATATGATCAGTGGCTTTTTAGTTCATC
____________________________________________________________
consensus GAGGGAGCTCTTCGGTTGGACAACTAATTGGGTATATGATCAGTGGCTTTTTAGTTCATC

. : . : . : . : . : . :
JMSF022E23+ TAATCGGATCAAAGGGAGTGTTTGGAATTCTGAGTATGCCGCCTTCTCTAGTTGTTTTGG
____________________________________________________________
consensus TAATCGGATCAAAGGGAGTGTTTGGAATTCTGAGTATGCCGCCTTCTCTAGTTGTTTTGG

. : . : . : . : . : . :
JMSF022E23+ TAGGAATCATGATACGAGAAAGTTTACGCC
____________________________________________________________
consensus TAGGAATCATGATACGAGAAAGTTTACGCC