Alignment Contig 10947

                          .    :    .    :    .    :    .    :    .    :    .    :

JMSF052H24+ GACTTTTGAGTCGATTGCAGAAAGAATGACAGATCTCCACTCTCCTCAGCGATCATCGAC
JMSF026M14+ GACTTTTGAGTCGATTGCAGAAAGAATGACAGATCTCCACTCTCCTCAGCGATCATCGAC
JMFF008L16+ ACTTTTGAGTCGATTGCAGAAAGAATGACAGATCTCCACTCTCCTCAGCGATCATCGAC
JMSF009G14+ GAGTCGATTGCAGAAAGAATGACAGATCTCCACTCTCCTCAGCGATCATCGAC
JMSF038L09+ GACTTTTGAGTCGATTGCAGAAAGAATGACAGATCTCCACTCTCCTCAGCGATCATCGAC
JMSF048J21+ GACTTTTGAGTCGATTGCAGAAAGAATGACAGATCTCCACTCTCCTCAGCGATCATCGAC
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consensus GACTTTTGAGTCGATTGCAGAAAGAATGACAGATCTCCACTCTCCTCAGCGATCATCGAC

. : . : . : . : . : . :
JMSF052H24+ TCCAGGAGCTCCGCCGCGCTCCGCCACCGACCTCTTCGGGGATCCGACGGACGCTAACCC
JMSF026M14+ TCCAGGAGCTCCGCCGCGCTCCGCCACCGACCTCTTCGGGGATCCGACGGACGCTAACCC
JMFF008L16+ TCCAGGAGCTCCGCCGCGCTCCGCCACCGACCTCTTCGGGGATCCGACGGACGCTAACCC
JMSF009G14+ TCCAGGAGCTCCGCCGCGCTCCGCCACCGACCTCTTCGGGGATCCGACGGACGCTAACCC
JMSF038L09+ TCCAGGAGCTCCGCCGCGCTCCGCCACCGACCTCTTCGGGGATCCGACGGACGCTAACCC
JMSF048J21+ TCCAGGAGCTCCGCCGCGCTCCGCCACCGACCTCTTCGGGGATCCGACGGACGCTAACCC
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consensus TCCAGGAGCTCCGCCGCGCTCCGCCACCGACCTCTTCGGGGATCCGACGGACGCTAACCC

. : . : . : . : . : . :
JMSF052H24+ CCCACAATGGCTAAACCCTCCGCTGTTCCTCTCCGAGGACTTCGACGCCGAGACGTACAT
JMSF026M14+ CCCACAATGGCTAAACCCTCCGCTGTTCCTCTCCGAGGACTTCGACGCCGAGACGTACAT
JMFF008L16+ CCCACAATGGCTAAACCCTCCGCTGTTCCTCTCCGAGGACTTCGACGCCGAGACGTACAT
JMSF009G14+ CCCACAATGGCTAAACCCTCCGCTGTTCCTCTCCGAGGACTTCGACGCCGAGACGTACAT
JMSF038L09+ CCCACAATGGCTAAACCCTCCGCTGTTCCTCTCCGAGGACTTCGACGCCGAGACGTACAT
JMSF048J21+ CCCACAATGGCTAAACCCTCCGCTGTTCCTCTCCGAGGACTTCGACGCCGAGACGTACAT
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consensus CCCACAATGGCTAAACCCTCCGCTGTTCCTCTCCGAGGACTTCGACGCCGAGACGTACAT

. : . : . : . : . : . :
JMSF052H24+ TTCGGACCTCCGCACATTCGTCCCACTGGACACTCTCCGTTCGGAGCTCAGGTCACACCT
JMSF026M14+ TTCGGACCTCCGCACATTCGTCCCACTGGACACTCTCCGTTCGGAGCTCAGGTCACACCT
JMFF008L16+ TTCGGACCTCCGCACATTCGTCCCACTGGACACTCTCCGTTCGGAGCTCAGGTCACACCT
JMSF009G14+ TTCGGACCTCCGCACATTCGTCCCACTGGACACTCTCCGTTCGGAGCTCAGGTCACACCT
JMSF038L09+ TTCGGACCTCCGCACATTCGTCCCACTGGACACTCTCCGTTCGGAGCTCAGGTCACACCT
JMSF048J21+ TTCGGACCTCCGCACATTCGTCCCACTGGACACTCTCCGTTCGGAGCTCAGGTCACACCT
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consensus TTCGGACCTCCGCACATTCGTCCCACTGGACACTCTCCGTTCGGAGCTCAGGTCACACCT

. : . : . : . : . : . :
JMSF052H24+ CTCCTCTCTTCAACGCGACCTCGTCGACCTAATCAACCGCGACTATGCCGATTTCGTCAG
JMSF026M14+ CTCCTCTCTTCAACGCGACCTCGTCGACCTAATCAACCGCGACTATGCCGATTTCGTCAG
JMFF008L16+ CTCCTCTCTTCAACGCGACCTCGTCGACCTAATCAACCGCGACTATGCCGATTTCGTCAG
JMSF009G14+ CTCCTCTCTTCAACGCGACCTCGTCGACCTAATCAACCGCGACTATGCCGATTTCGTCAG
JMSF038L09+ CTCCTCTCTTCAACGCGACCTCGTCGACCTAATCAACCGCGACTATGCCGATTTCGTCAG
JMSF048J21+ CTCCTCTCTTCAACGCGACCTCGTCGACCTAATCAACCGCGACTATGCCGATTTCGTCAG
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consensus CTCCTCTCTTCAACGCGACCTCGTCGACCTAATCAACCGCGACTATGCCGATTTCGTCAG

. : . : . : . : . : . :
JMSF052H24+ CCTCAGCACCAAATTGACCGACGTTGACGCAGCCGTTGTCCGAATGCGTGCCCCCTTGCT
JMSF026M14+ CCTCAGCACTAAATTGACCGACGTTGACGCAGCCGTTGTCCGAATGCGTGCCCCCTTGCT
JMFF008L16+ CCTCAGCACCAAATTGACCGACGTTGACGCAGCCGTTGTCCGAATGCGTGCCCCCTTGCT
JMSF009G14+ CCTCAGCACCAAATTGACCGACGTTGACGCAGCCGTTGTCCGAATGCGTGCCCCCTTGCT
JMSF038L09+ CCTCAGCACCAAATTGACCGACGTTGACGCAGCCGTTGTCCGAATGCGTGCCCCCTTGCT
JMSF048J21+ CCTCAGCACCAAATTGACCGACGTTGACGCAGCCGTTGTCCGAATGCGTGCCCCCTTGCT
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consensus CCTCAGCACCAAATTGACCGACGTTGACGCAGCCGTTGTCCGAATGCGTGCCCCCTTGCT

. : . : . : . : . : . :
JMSF052H24+ CGAGATCCGACACAAGATCTCCACTTTCCGCGAAGCCGTGGAGAGCTCGCTCAGCGCTCT
JMSF026M14+ CGAGATCCGACACAAGATCTCCACTTTCCGCGAAGCCGTGGAGAGCTCGCTCAGCGCTCT
JMFF008L16+ CGAGATCCGACACAAGATCTCCACTTTCCGCGAAGCCGTGGAGAGCTCGCTCAGCGCTCT
JMSF009G14+ CGAGATCCGACACAAGATCTCCACTTTCCGCGAAGCCGTGGAGAGCTCGCTCAGCGCTCT
JMSF038L09+ CGAGATCCGACACAAGATCTCCACTTTCCGCGAAGCCGTGGAGAGCTCGCTCAGCGCTCT
JMSF048J21+ CGAGATCCGACACAAGATCTCCACTTTCCGCGAAGCCGTGGAGAGCTCGCTCAGCGCTCT
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consensus CGAGATCCGACACAAGATCTCCACTTTCCGCGAAGCCGTGGAGAGCTCGCTCAGCGCTCT

. : . : . : . : . : . :
JMSF052H24+ TCACTCGCGGCTCAAGCAGCGCGCCGATGCCGGTGAGGCTCGGGAAGTTCTAGAGCTCTT
JMSF026M14+ TCACTCGCGGCTCAAGCAGCGCGCCGATGCCGGTGAGGCTCGGGAAGTTCTAGAGCTCTT
JMFF008L16+ TCACTCGCGGCTCAAGCAGCGCGCCGATGCCGGTGAGGCTCGGGAAGTTCTAGAGCTCTT
JMSF009G14+ TCACTCGCGGCTCAAGCAGCGCGCCGATG
JMSF038L09+ TCACTCGCGGCTCAAGCAGCGCGCCGATGCCGGTGAGGCTCGGGAAGTTCTAGAGCTCTT
JMSF048J21+ TCACTCGCGGCTCAAGCAGCGCGCCGATGCCGGTGAGGCTCGGGAAGTTCTAGAGCTCTT
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consensus TCACTCGCGGCTCAAGCAGCGCGCCGATGCCGGTGAGGCTCGGGAAGTTCTAGAGCTCTT

. : . : . : . : . : . :
JMSF052H24+ GCTCGATACCTTCCACGTTGTGTCAAAGGTGGAGAAATTGATCAAGGAATTGCCGAGTGG
JMSF026M14+ GCTCGATACCTTCCACGTTGTGTCAAAGGTGGAGAAATTGATCAAGGAATTGCCGAGTGG
JMFF008L16+ GCTCGATACCTTCCACGTTGTGTCAAAGGTGGAGAAATTGATCAAGGAATTGCCGAGTGG
JMSF038L09+ GCTCGATACCTTCCACGTTGTGTCAAAGGTGGAGAAATTGATCAAGGAATTGCCGAGTGG
JMSF048J21+ GCTCGATACCTTCCACGTTGTGTCAAAGGTGGAGAAATTGATCAAGGAATTGCCGAGTGG
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consensus GCTCGATACCTTCCACGTTGTGTCAAAGGTGGAGAAATTGATCAAGGAATTGCCGAGTGG

. : . : . : . : . : . :
JMSF052H24+ GGCTACTAATTTGGCAAATGGAATAGCTAATTATGCGGACAATGGTTATTTAAGCAATGG
JMSF026M14+ GGCTACTAATTTGGCAAATGGAATAGCTAATTATGCGGACAATGGTTATTTAAGCAATGG
JMFF008L16+ GGCTACTAATTTGGCAAATGGAATAGCTAATTATGCGGACAATGGTTATTTAAGCAATGG
JMSF038L09+ GGCTACTAATTTGGCAAATGGAATAGCTAATTATGCGGACAATGGTTATTTAAGCAATGG
JMSF048J21+ GGCTACTAATTTGGCAAATGGAATAGCTAATTATGCGGACAATGGTTATTTAAGCAATGG
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consensus GGCTACTAATTTGGCAAATGGAATAGCTAATTATGCGGACAATGGTTATTTAAGCAATGG

. : . : . : . : . : . :
JMSF052H24+ AGTCTCATTTCAGCATACTGAAAA
JMSF026M14+ AGTCTCATTTCAGCATACTGAAAA
JMFF008L16+ AGTCTCATTTCAGCATACTGAAAA
JMSF038L09+ AGTCTCATTTCAGCATACTGAAAA
JMSF048J21+ AGTCTCATTTCAGCATACTGAAAAGGGATCGAATCTGAGAGAAACTCAAAGCATGCATCT
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consensus AGTCTCATTTCAGCATACTGAAAAGGGATCGAATCTGAGAGAAACTCAAAGCATGCATCT

. : . : . : . : . : . :
JMSF048J21+ TGAGCGAATTGCAAGCGAGATGAATAGACTGAAGTTCTACATAGCTCATGCG
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consensus TGAGCGAATTGCAAGCGAGATGAATAGACTGAAGTTCTACATAGCTCATGCG