Alignment Contig 10946

                          .    :    .    :    .    :    .    :    .    :    .    :

JMSF052H14+ GGCTCGACTCTTGCAAAACCCCGAGCCCGTAACTGCTCCCCTTTGTACTGGATTCCACTC
JMFF010E06+ GTACTGGATTCCACTC
JMFF011L02+ GTACTGGATTCCACTC
JMSF028F08+ GTACTGGATTCCACTC
JMFF049C06+ GTACTGGATTCCACTC
____________________________________________________________
consensus GGCTCGACTCTTGCAAAACCCCGAGCCCGTAACTGCTCCCCTTTGTACTGGATTCCACTC

. : . : . : . : . : . :
JMSF052H14+ AGCTGCCGGGGGGACCACGCCGGCGCGATGAAGGTGTAGAGTGATCAATTTCAACGTCTC
JMFF010E06+ AGCTGCCGGGGGGACCACGCCGGCGCGATGAAGGTGTAGAGTGATCAATTTCAACGTCTC
JMFF011L02+ AGCTGCCGGGGGGACCACGCCGGCGCGATGAAGGTGTAGAGTGATCAATTTCAACGTCTC
JMSF028F08+ AGCTGCCGGGGGGACCACGCCGGCGCGATGAAGGTGTAGAGTGATCAATTTCAACGTCTC
JMFF049C06+ AGCTGCCGGGGGGACCACGCCGGCGCGATGAAGGTGTAGAGTGATCAATTTCAACGTCTC
____________________________________________________________
consensus AGCTGCCGGGGGGACCACGCCGGCGCGATGAAGGTGTAGAGTGATCAATTTCAACGTCTC

. : . : . : . : . : . :
JMSF052H14+ TGCCGTGCCTGGAGAAGGAAATGGTTCAGGAAATGGCTAATTCCAAGCCTTTGTTCCTGA
JMFF010E06+ TGCCGTGCCTGGAGAAGGAAATGGTTCAGGAAATGGCTAATTCCAAGCCTTTGTTCCTGA
JMFF011L02+ TGCCGTGCCTGGAGAAGGAAATGGTTCAGGAAATGGCTAATTCCAAGCCTTTGTTCCTGA
JMSF028F08+ TGCCGTGCCTGGAGAAGGAAATGGTTCAGGAAATGGCTAATTCCAAGCCTTTGTTCCTGA
JMFF049C06+ TGCCGTGCCTGGAGAAGGAAATGGTTCAGGAAATGGCTAATTCCAAGCCTTTGTTCCTGA
____________________________________________________________
consensus TGCCGTGCCTGGAGAAGGAAATGGTTCAGGAAATGGCTAATTCCAAGCCTTTGTTCCTGA

. : . : . : . : . : . :
JMSF052H14+ CGATCTACGCCACCGTGGCGGTTGGCGTTGTCTTCTCGGCTTTCTATGTCTTCTCTGCCG
JMFF010E06+ CGATCTACGCCACCGTGGCGGTTGGCGTTGTCTTCTCGGCTTTCTATGTCTTCTCTGCCG
JMFF011L02+ CGATCTACGCCACCGTGGCGGTTGGCGTTGTCTTCTCGGCTTTCTATGTCTTCTCTGCCG
JMSF028F08+ CGATCTACGCCACCGTGGCGGTTGGCGTTGTCTTCTCGGNTTTCTATGTCTTCTCTGCCG
JMFF049C06+ CGATCTACGCCACCGTGGCGGTTGGCGTTGTCTTCTCGGCTTTCTATGTCTTCTCTGCCG
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consensus CGATCTACGCCACCGTGGCGGTTGGCGTTGTCTTCTCGGCTTTCTATGTCTTCTCTGCCG

. : . : . : . : . : . :
JMSF052H14+ TCTACTCCTCTTCCGCCGCCTCCTCCTCCGCGCCTATAGCCTCCTCCTTTTCTCTCTTCC
JMFF010E06+ TCTACTCCTCTTCCGCCGCCTCCTCCTCCGCGCCTATAGCCTCCTCCTTTTCTCTCTTCC
JMFF011L02+ TCTACTCCTCTTCCGCCGCCTCCTCCTCCGCGCCTATAGCCTCCTCCTTTTCTCTCTTCC
JMSF028F08+ TCTACTCCTCTTCCGCCGCCTCCTCCTCCGCGCCTATAGCCTCCTCCTTTTCTCTCTTCC
JMFF049C06+ TCTACTCCTCTTCCGCCGCCTCCTCCTCCGCGCCTATAGCCTCCTCCTTTTCTCTCTTCC
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consensus TCTACTCCTCTTCCGCCGCCTCCTCCTCCGCGCCTATAGCCTCCTCCTTTTCTCTCTTCC

. : . : . : . : . : . :
JMSF052H14+ CGATTGCTCCTTCCTATTCGCCAGATGTACCGGCAGCAGTTCTAACTCAAATACATAATG
JMFF010E06+ CGATTGCTCCTTCCTATTCGCCAGATGTACCGGCAGCAGTTCTAACTCAAATACATAATG
JMFF011L02+ CGATTGCTCCTTCCTATTCGCCAGATGTACCGGCAGCAGTTCTAACTCAAATACATAATG
JMSF028F08+ CGATTGCTCCTTCCTATTCGCCAGATGTACCGGCAGCAGTTCTAACTCAAATACATAATG
JMFF049C06+ CGATTGCTCCTTCCTATTCGCCAGATGTACCGGCAGCAGTTCTAACTCAAATACATAATG
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consensus CGATTGCTCCTTCCTATTCGCCAGATGTACCGGCAGCAGTTCTAACTCAAATACATAATG

. : . : . : . : . : . :
JMSF052H14+ AGTCTCTAAAAGAAACTGTTGGTTCACCTCAAGCACCAAAGACCCAGGCGAAAAGCAAGT
JMFF010E06+ AGTCTCTAAAAGAAACTGTTGGTTCACCTCAAGCACCAAAGACCCAGGCGAAAAGCAAGT
JMFF011L02+ AGTCTCTAAAAGAAACTGTTGGTTCACCTCAAGCACCAAAGACCCAGGCGAAAAGCAAGT
JMSF028F08+ AGTCTCTAAAANAAACTGTTGGNTCACCTCAAGCACCAAAGACCCAGGCGAAAAGCAAGT
JMFF049C06+ AGTCTCTAAAAGAAACTGTTGGTTCACCTCAAGCACCAAAGACCCAGGCGAAAAGCAAGT
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consensus AGTCTCTAAAAGAAACTGTTGGTTCACCTCAAGCACCAAAGACCCAGGCGAAAAGCAAGT

. : . : . : . : . : . :
JMSF052H14+ CACTGAAACCTATATGGATCTCTCCCCCTCCCGGTTCACGAATGCCATCTCTAGAAACTT
JMFF010E06+ CACTGAAACCTATATGGATCTCTCCCCCTCCCGGTTCACGAATGCCATCTCTAGAAACTT
JMFF011L02+ CACTGAAACCTATATGGATCTCTCCCCCTCCCGGTTCACGAATGCCATCTCTAGAAACTT
JMSF028F08+ CACTGAAACCTATATGGATCTCTCCCCCTCCCGGTTCACGAATGCCATCTCTAGAAACTT
JMFF049C06+ CACTGAAACCTATATGGATCTCTCCCCCTCCCGGTTCACGAATGCCATCTCTAGAAACTT
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consensus CACTGAAACCTATATGGATCTCTCCCCCTCCCGGTTCACGAATGCCATCTCTAGAAACTT

. : . : . : . : . : . :
JMSF052H14+ TCAGATTGACCAAAGAACTATTTCAGGAAAGAGTGAGGGACAATGTCATAATTGTGACCT
JMFF010E06+ TCAGATTGACCAAAGAACTATTTCAGGAAAGAGTGAGGGACAATGTCATAATTGTGACCT
JMFF011L02+ TCAGATTGACCAAAGAACTATTTCANGAAAGAGTGAGGGACAATGTCATAATTGTGACCT
JMSF028F08+ TCAGATTGACCAAAGAACTATTTCAGGAAAGAGTGAGGGACAATGTCATAATTGTGACCT
JMFF049C06+ TCAGATTGACCAAAGAACTATTTCAGGAAAGAGTGAGGGACAATGTCATAATTGTGACCT
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consensus TCAGATTGACCAAAGAACTATTTCAGGAAAGAGTGAGGGACAATGTCATAATTGTGACCT

. : . : . : . : . : . :
JMSF052H14+ TTGGCAACTATGCTTTCATGGATTTCATATTGACATGGGTTAAACACTTGACAGATATGG
JMFF010E06+ TTGGCAACTATGCTTTCATGGATTTCATATTGACATGGGTTAAACACTTGACAGATATGG
JMFF011L02+ TTGGCAACTATGCTTTCATGGATTTCA
JMSF028F08+ TTGGCAACTATGCTTTCATGGATTTCATATTGACATGGGTTAAACACTTGACAGATATGG
JMFF049C06+ TTGGCAACTATGCTTTCATGGATTTCATATTGACATGGGTTAAACACTTGACAGATATGG
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consensus TTGGCAACTATGCTTTCATGGATTTCATATTGACATGGGTTAAACACTTGACAGATATGG

. : . : . : . : . : . :
JMSF052H14+ ATGTCGACAACCTACTTGTTGGTGCATTGGACACCAAATTATTGGAGGCTCTTTACTGGA
JMFF010E06+ ATGTCGACAACCTACTTGTTGGT
JMSF028F08+ ATGTCGACAACCTACTTGTTGGTGCATTGGACACCAAATTATTGGAGGCTCTTTACTGGA
JMFF049C06+ ATGTCGACAACCTACTTGTTGGTGCATTGGACACCAAATTATTGGAGGCTCTTTACTGGA
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consensus ATGTCGACAACCTACTTGTTGGTGCATTGGACACCAAATTATTGGAGGCTCTTTACTGGA

. : . : . : . : . : . :
JMSF052H14+ AAGGTATACCTGTTTTTGACAT
JMSF028F08+ AAGGTATACCTGTTTT
JMFF049C06+ AAGGTATACCTGTTTT
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consensus AAGGTATACCTGTTTTTGACAT