Alignment Contig 10920

                          .    :    .    :    .    :    .    :    .    :    .    :

JMSF049O10+ GGCGATACGTGTATAAATGACAGGCCAGAACATATCGTTTCCAGTTAGAGTTCAGAAAAA
JMSF017P21+ GTTAGAGTTCAGAAAAA
JMFF007A19+ GTTAGAGTTCAGAAAAA
JMSF008D21+ AGAGTTCAGAAAAA
JMFF028C07+ AGAGTTCAGAAAAA
JMFF031B12+ AGAGTTCAGAAAAA
JMSF037I09+ GAGTTAGAGTTCAGAAAAA
JMSF001I24+ GAGTTAGAGTTCAGAAAAA
JMSF003C11+ GAGTTAGAGTTCAGAAAAA
JMSF033L18+ GAGTTAGAGTTCAGAAAAA
JMSF048N06+ GAGTTCAGAAAAA
JMSF008O06+ GAGTTCAGAAAAA
____________________________________________________________
consensus GGCGATACGTGTATAAATGACAGGCCAGAACATATCGTTTCGAGTTAGAGTTCAGAAAAA

. : . : . : . : . : . :
JMSF049O10+ TTAACAGAAGTCATGGGCAAAGAGACTTCCTCCTCCGTCAACCACCACTCCACGCCGGAG
JMSF017P21+ TTAACAGAAGTCATGGGCAAAGAGACTTCCTCCTCCGTCAACCACCACTCCACGCCGGAG
JMFF007A19+ TTAACAGAAGTCATGGGCAAAGAGACTTCCTCCTCCGTCAACCACCACTCCACGCCGGAG
JMSF008D21+ TTAACAGAAGTCATGGGCAAAGAGACTTCCTCCTCCGTCAACCACCACTCCACGCCGGAG
JMFF028C07+ TTAACAGAAGTCATGGGCAAAGAGACTTCCTCCTCCGTCAACCACCACTCCACGCCGGAG
JMFF031B12+ TTAACAGAAGTCATGGGCAAAGAGACTTCCTCCTCCGTCAACCACCACTCCACGCCGGAG
JMSF037I09+ TTAACAGAAGTCATGGGTAAAGAGACTTCCTCCTCCGTCAACCACCACTCCACGCCGGAG
JMSF001I24+ TTAACAGAAGTCATGGGCAAAGAGACTTCCTCCTCCGTCAACCACCACTCCACGCCGGAG
JMSF003C11+ TTAACAGAAGTCATGGGCAAAGAGACTTCCTCCTCCGTCAACCACCACTCCACGCCGGAG
JMSF033L18+ TTAACAGAAGTCATGGGCAAAGAGACTTCCTCCTCCGTCAACCACCACTCCACGCCGGAG
JMSF048N06+ TTAACAGAAGTCATGGGCAAAGAGACTTCCTCCTCCGTCAACCACCACTCCACGCCGGAG
JMSF008O06+ TTAACAGAAGTCATGGGCAAAGAGACTTCCTCCTCCGTCAACCACCACTCCACGCCGGAG
JMFN005I01+ TGGGCAAAGAGACTTCCTCCTCCGTCAACCACCACTCCACGCCGGAG
____________________________________________________________
consensus TTAACAGAAGTCATGGGCAAAGAGACTTCCTCCTCCGTCAACCACCACTCCACGCCGGAG

. : . : . : . : . : . :
JMSF049O10+ AACGGCGGCTTCAAGCTGGTGGGTTTCAAGGATTTCGTTCGTGTTAATCCCAAATCCGAC
JMSF017P21+ AACGGCGGCTTCAAGCTGGTGGGTTTCAAGGATTTCGTTCGTGTTAATCCCAAATCCGAC
JMFF007A19+ AACGGCGGCTTCAAGCTGGTGGGTTTCAAGGATTTCGTTCGTGTTAATCCCAAATCCGAC
JMSF008D21+ AACGGCGGCTTCAAGCTGGTGGGTTTCAAGGATTTCGTTCGTGTTAATCCCAAATCCGAC
JMFF028C07+ AACGGCGGCTTCAAGCTGGTGGGTTTCAAGGATTTCGTTCGTGTTAATCCCAAATCCGAC
JMFF031B12+ AACGGCGGCTTCAAGCTGGTGGGTTTCAAGGATTTCGTTCGTGTTAATCCCAAATCCGAC
JMSF037I09+ AACGGCGGCTTCAAGCTGGTGGGTTTCAAGGATTTCGTTCGTGTTAATCCCAAATCCGAC
JMSF001I24+ AACGGCGGCTTCAAGCTGGTGGGTTTCAAGGATTTCGTTCGTGTTAATCCCAAATCCGAC
JMSF003C11+ AACGGCGGCTTCAAGCTGGTGGGTTTCAAGGATTTCGTTCGTGTTAATCCCAAATCCGAC
JMSF033L18+ AACGGCGGCTTCAAGCTGGTGGGTTTCAAGGATTTCGTTCGTGTTAATCCCAAATCCGAC
JMSF048N06+ AACGGCGGCTTCAAGCTGGTGGGTTTCAAGGATTTCGTTCGTGTTAATCCCAAATCCGAC
JMSF009O06+ ATCCCAAATCCGAC
JMSF008O06+ AACGGCGGCTTCAAGCTGGTGGGTTTCAAGGATTTCGTTCGTGTTAATCCCAAATCCGAC
JMFN005I01+ AACGGCGGCTTCAAGCTGGTGGGTTTCAAGGATTTCGTTCGTGTTAATCCCAAATCCGAC
____________________________________________________________
consensus AACGGCGGCTTCAAGCTGGTGGGTTTCAAGGATTTCGTTCGTGTTAATCCCAAATCCGAC

. : . : . : . : . : . :
JMSF049O10+ CACTTCTCCGTGAAACGCTTCCACCATGTGGAGTTCTGGTGCGGCGATGCTACTAACACT
JMSF017P21+ CACTTCTCCGTGAAACGCTTCCACCATGTGGAGTTCTGGTGCGGCGATGCTACTAACACT
JMFF007A19+ CACTTCTCCGTGAAACGCTTCCACCATGTGGAGTTCTGGTGCGGCGATGCTACTAACACT
JMSF008D21+ CACTTCTCCGTGAAACGCTTCCACCATGTGGAGTTCTGGTGCGGCGATGCTACTAACACT
JMFF028C07+ CACTTCTCCGTGAAACGCTTCCACCATGTGGAGTTCTGGTGCGGCGATGCTACTAACACT
JMFF031B12+ CACTTCTCCGTGAAACGCTTCCACCATGTGGAGTTCTGGTGCGGCGATGCTACTAACACT
JMSF037I09+ CACTTCTCCGTGAAACGCTTCCACCATGTGGAGTTCTGGTGCGGCGATGCTACTAACACT
JMSF001I24+ CACTTCTCCGTGAAACGCTTCCACCATGTGGAGTTCTGGTGCGGCGATGCTACTAACACT
JMSF003C11+ CACTTCTCCGTGAAACGCTTCCACCATGTGGAGTTCTGGTGCGGCGATGCTACTAACACT
JMSF033L18+ CACTTCTCCGTGAAACGCTTCCACCATGTGGAGTTCTGGTGCGGCGATGCTACTAACACT
JMSF048N06+ CACTTCTCCGTGAAACGCTTCCACCATGTGGAGTTCTGGTGCGGCGATGCTACTAACACT
JMSF009O06+ CACTTCTCCGTGAAACGCTTCCACCATGTGGAGTTCTGGTGCGGCGATGCTACTAACACT
JMSF008O06+ CACTTCTCCGTGAAACGCTTCCACCATGTGGAGTTCTGGTGCGGCGATGCTACTAACACT
JMFN005I01+ CACTTCTCCGTGAAACGCTTCCACCATGTGGAGTTCTGGTGCGGCGATGCTACTAACACT
____________________________________________________________
consensus CACTTCTCCGTGAAACGCTTCCACCATGTGGAGTTCTGGTGCGGCGATGCTACTAACACT

. : . : . : . : . : . :
JMSF049O10+ GCCCGCCGCTTCTCCTGGGCGCTGGGAATGCCCATTGCCGCGAAATCCGATCTTTCCACC
JMSF017P21+ GCCCGCCGCTTCTCCTGGGCGCTGGGAATGCCCATTGCCGCGAAATCCGATCTTTCCACC
JMFF007A19+ GCCCGCCGCTTCTCCTGGGCGCTGGGAATGCCCATTGCCGCGAAATCCGATCTTTCCACC
JMSF008D21+ GCCCGCCGCTTCTCCTGGGCGCTGGGAATGCCCATTGCCGCGAAATCCGATCTTTCCACC
JMFF028C07+ GCCCGCCGCTTCTCCTGGGCGCTGGGAATGCCCATTGCCGCGAAATCCGATCTTTCCACC
JMFF031B12+ GCCCGCCGCTTCTCCTGGGCGCTGGGAATGCCCATTGCCGCGAAATCCGATCTTTCCACC
JMSF037I09+ GCCCGCCGCTTCTCCTGGGCGCTGGGAATGCCCATTGCCGCGAAATCCGATCTTTCCACC
JMSF001I24+ GCCCGCCGCTTCTCCTGGGCGCTGGGAATGCCCATTGCCGCGAAATCCGATCT
JMSF003C11+ GCCCGCCGCTTCTCCTGGGCGCTGGGAATGCCCATTGCCGCGAAATCCGATCTTTCCACC
JMSF033L18+ GCCCGCCGCTTCTCCTGGGCGCTGGGAATGCCCATTGCCGCGAAATCCGATCTTTCCACC
JMSF048N06+ GCCCGCCGCTTCTCCTGGGCGCTGGGAATGCCCATTGCCGCGAAATCCGATCTTTCCACC
JMSF009O06+ GCCCGCCGCTTCTCCTGGGCGCTGGGAATGCCCATTGCCGCGAAATCCGATCTTTCCACC
JMSF008O06+ GCCCGCCGCTTCTCCTGGGCGCTGGGAATGCCCATTGCCGCGAAATCCGATCTTTCCACC
JMFN005I01+ GCCCGCCGCTTCTCCTGGGCGCTGGGAATGCCCATTGCCGCGAAATCCGATCTTTCCACC
____________________________________________________________
consensus GCCCGCCGCTTCTCCTGGGCGCTGGGAATGCCCATTGCCGCGAAATCCGATCTTTCCACC

. : . : . : . : . : . :
JMSF049O10+ GGAAA-CTCCGCTCACGCTTCTTATCTCCTACGCGCTTCCGGCGGCGAGCTTCAGTTCCT
JMSF017P21+ GGAAA-CTCCGCTCACGCTTCTTATCTCCTACGCGCTTCCGGCGGCGAGCTTCAGTTCCT
JMFF007A19+ GGAAA-CTCCGCTCACGCTTCTTATCTCCTACGCGCTTCCGGCGGCGAGCTTCAGTTCCT
JMSF008D21+ GGAAA-CTCCGCTCACGCTTCTTATCTCCTACGCGCTTCCGGCGGCGAGCTTCAGTTCCT
JMFF028C07+ GGAAA-CTCCGCTCACGCTTCTTATCTCCTACGCGCTTCCGGCGGCGAGCTTCAGTTCCT
JMFF031B12+ GGAAA-CTCCGCTCACGCTTCTTATCTCCTACGCGCTTCCGGCGGCGAGCTTCAGTTCCT
JMSF037I09+ GGAAA-CTCCGCTCACGCTTCTTATCTCCTACGCGCTTCCGGCGGCGAGCTTCAGTTCCT
JMSF003C11+ GGAAA-CTCCGCTCACGCTTCTTATCTCCTACGCGCTTCCGGCGGCGAGCTTCAGTTCCT
JMSF033L18+ GGAAA-CTCCGCTCACGCTTCTTATCTCCTACGCGCTTCCGGCGGCGAGCTTCAGTTCCT
JMSF048N06+ GGAAA-CTCCGCTCACGCTTCTTATCTCCTACGCGCTTCCGGCGGCGAGCTTCAGTTCCT
JMSF009O06+ GGAAAACTCCGNTCACGCTTCTTATCTCCTACGCGCT
JMSF008O06+ GGAAA-CTCCGCTCACGCTTCTTATCTCCTACGCGCTT
JMFN005I01+ GGAAA-CTCCGCTCACGCTTCTTATCTCCTACGCGCTTCCGGCGGCGAGCTTCAGTTCCT
____________________________________________________________
consensus GGAAA-CTCCGCTCACGCTTCTTATCTCCTACGCGCTTCCGGCGGCGAGCTTCAGTTCCT

. : . : . : . : . : . :
JMSF049O10+ CTTCACAGCTCCCTATGCGTCCTCCATTTCCAACCCCGCCTCCGCCGCCATCCCCTCCTT
JMSF017P21+ CTTCACAGCTCCCTATGCG
JMFF007A19+ CTTCACAGCTCCCTATGCGTCCTCCATTTCCAACCCCGCCTCCGCCGCCATCCCCTCCTT
JMSF008D21+ CTTCACAGCTCCCTATGCGTCCTCCATTTC
JMFF028C07+ CTTCACAGCTCCCTATGCGTCCTCCATTTCCAACCCCGCCTCCGCCGCCATCCCCTCCTT
JMFF031B12+ CTTCACAGCTCCCTATGCGTCCTCCATTTCCAACCCCGCCTCCGCCGCCATCCCCTCCTT
JMSF037I09+ CTTCACAGCTCCCTATGCGTCCTCCATTTCCAACCCCGCCTCCGCCGCCATCCCCTCCTT
JMSF003C11+ CTTC
JMSF033L18+ CTTCACAGCTCCCTATGCGTCCTCCATTTCCAACCCCGCCTCCGCCGCCATCCCCTCCTT
JMSF048N06+ CTTCACAGCTCCCTATGCGTCCTCCATTTCCAACCCCGCCTCCGCCGCCATCCCCTCCTT
JMFN005I01+ CTTCACAGCTCCCTATGCGTCCTCCATTTCCAACCCCGCCTCCGCCGCCATCCCCTCCTT
____________________________________________________________
consensus CTTCACAGCTCCCTATGCGTCCTCCATTTCCAACCCCGCCTCCGCCGCCATCCCCTCCTT

. : . : . : . : . : . :
JMSF049O10+ CTCCGCCTCCGCCCACCGCTCCTTCAACGCCACCCACGGACTCGGCGTCCGCGCGGTCGC
JMFF007A19+ CTCCGCCTCCGCCCACCGCTCCTTCAACGCCACCCACGGACTCGGCGTCCGCGCGGTCGC
JMFF028C07+ CTCCGCCTCCGCCCACCGCTCCTTCAACGCCACCCACGGACTCGGCGTCCGCGCGGTCGC
JMFF031B12+ CTCCGCCTCCGCCCACCGCTCCTTCAACGCCACCCACGGACTCGGCGTCCGCGCGGTCGC
JMSF037I09+ CTCCGCCTCCGCCCACCGCTCCTTCAACGCCACCCACGGACTCGGCGTCCGCGCGGTCGC
JMSF033L18+ CTCCGCCTCCGCCCACCGCTCCTTCAACGCCACCCACGGACTCGGCGTCCGCGCGGTCGC
JMSF048N06+ CTCCGCCTCCGCCCACCGCTCCTTCAACGCCACCCACGGACTCGGCGTCCGCGCGGTCGC
JMFN005I01+ CTCCGCCTCCGCCCACCGCTCCTTCAACGCCACCCACGGACTCGGCGTCCGCGCGGTCGC
____________________________________________________________
consensus CTCCGCCTCCGCCCACCGCTCCTTCAACGCCACCCACGGACTCGGCGTCCGCGCGGTCGC

. : . : . : . : . : . :
JMSF049O10+ CCTGGTAGTTGAGGACACTCAGGCCGCCTTCTCCGCCAGCGTCTCCCGCGGCGCGAAACC
JMFF007A19+ CCTGGTAGTTGAGGACACTCAGGCCGCCTTCTCCGCCAGCGTCTCCCGCGGCGCGAAACC
JMFF028C07+ C
JMFF031B12+ CCTGGTAGTTGAGGACACTCAGGCCGCCTTCTCCGCCAGCGTCTCCCGCGGCGCGAAACC
JMSF037I09+ CCTGGTAGTTGAGGACACTCAGGCCGCCTTCTCCGCCAGCGTCTCCCGCGGCGCGAAACC
JMSF033L18+ CCTGGTAGTTGAGGACACTCAGGCCGCCTTCTCCGCCAGCGTCTCCCGCGGCGCGAAACC
JMSF048N06+ CCTGGTAGTTGAGGACACTCAGGCCGCCTTCTCCGCCAGCGTCTCCCGCGGCGCGAAACC
JMFN005I01+ CCTGGTAGTTGAGGACACTCAGGCCGCCTTCTCCGCCAGCGTCTCCCGCGGCGCGAAACC
____________________________________________________________
consensus CCTGGTAGTTGAGGACACTCAGGCCGCCTTCTCCGCCAGCGTCTCCCGCGGCGCGAAACC

. : . : . : . : . : . :
JMSF049O10+ CGTGTCGGAGCCCGTTACACTCAACAACCAAGTAGTCCTCGCCGAAGTCCACCTCTACGG
JMFF007A19+ CGTGTCGGAGCCCGTTACACTCAACAACCAAGTAGTCCTCGCC
JMFF031B12+ CGTGTCGGAGCCCGTTACACTCAACAACCAAG
JMSF037I09+ CGTGTCGGAGCCCGTTACACTCAACAACCAAGTAGTCCTCGCCGAAGTCCACCTCTACGG
JMSF033L18+ CGTGTCGGAGCCCGTTACACTCAACAACCAAGTAGTCCTCGCCGAAGTCCACCTCTACGG
JMSF048N06+ CGTGTCGGAGCCCGTTACACTCAACAACCAAGTAGTCCTCGCCGAAGTCCACCTCTACGG
JMFN005I01+ CGTGTCGGAGCCCGTTACACTCAACAACCAAGTAGTCCTCGCCGAAGTCCACCTCTACGG
____________________________________________________________
consensus CGTGTCGGAGCCCGTTACACTCAACAACCAAGTAGTCCTCGCCGAAGTCCACCTCTACGG

. : . : . : . : . : . :
JMSF049O10+ CGACGTCGTGCTCCGATTCATCAGCTATCTCTCCGACCCCTCCGCCGTCACAACATTCCT
JMSF037I09+ CGACGTCGTGCTCCGATTCATCAGCTATCTCTCCGACCCCTCCGCCGTCACAACATTCCT
JMSF033L18+ CGACGTCGTGCTCCGATTCATCAGCTATCTCTCCGACCCCTCCGCCGTCACAACATTCCT
JMSF048N06+ CGACGTCGTGCTCCGATTCATCAGCTATCTCTCCGACCCCTCCGCCGTCACAACATTCCT
JMFN005I01+ CGACGTCGTGCTCCGATTCATCAGCTATCTCTCCGACCCCTCCGCCGTCACAACATTCCT
____________________________________________________________
consensus CGACGTCGTGCTCCGATTCATCAGCTATCTCTCCGACCCCTCCGCCGTCACAACATTCCT

. : . : . : . : . : . :
JMSF049O10+ ACCAGGCTTCGAANCCATGGACGGAACCGCAT
JMSF037I09+ ACCAGGCTCCGAACCCATGGACGGAACCGCATCCTACCAAGA
JMSF033L18+ ACCAGGCTTCGAACCCATGGACGGAACCGCATCCTACCAAGA
JMSF048N06+ ACCAGGCTTCGAACCCATGGACGGAACCGCATCCTANCAAGACCTCGATTACGGAATCCG
JMFN005I01+ ACAAGGCTTCGAACCCATGGACGGAACCGCATCCTA
____________________________________________________________
consensus ACCAGGCTTCGAACCCATGGACGGAACCGCATCCTACCAAGACCTCGATTACGGAATCCG

. : . : . : . : . : . :
JMSF048N06+ CCGCCTCGACCACGCC
____________________________________________________________
consensus CCGCCTCGACCACGCC