Alignment Contig 10887

                          .    :    .    :    .    :    .    :    .    :    .    :

JMSF045P04+ GATCAATGGAGACTGGAGATTATTACTAATGAAATCTTGCCAGCAGATCATGTAATTATA
JMSF038G12+ GTAATTATA
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consensus GATCAATGGAGACTGGAGATTATTACTAATGAAATCTTGCCAGCAGATCATGTAATTATA

. : . : . : . : . : . :
JMSF045P04+ TTATATACATATATATATACACACACGACATCAAGGCAGAAGCCAGCTGCGGGAATATTT
JMFF043E10+ GCTGCGGGAATATTT
JMSF038G12+ TTATATACATATATATATACACACACGACATCAAGGCAGAAGCCAGCTGCGGGAATATTT
JMSF025C15+ GCTGCGGGAATATTT
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consensus TTATATACATATATATATACACACACGACATCAAGGCAGAAGCCAGCTGCGGGAATATTT

. : . : . : . : . : . :
JMSF045P04+ AGTACGTGTTAAAGTGTCTTTCTTGGTCTTCTGCGTACAATTAAGCTAATTATAACGAGA
JMFF047J08+ GGTCTTCTGCGTACAATTAAGCTAATTATAACGAGA
JMFF029N02+ GGTCTTCTGCGTACAATTAAGCTAATTATAACGAGA
JMFF043E10+ AGTACGTGTTAAAGTGTCTTTCTTGGTCTTCTGCGTACAATTAAGCTAATTATAACGAGA
JMSF038G12+ AGTACGTGTTAAAGTGTCTTTCTTGGTCTTCTGCGTACAATTAAGCTAATTATAACGAGA
JMSF025C15+ AGTACGTGTTAAAGTGTCTTTCTTGGTCTTCTGCGTACAATTAAGCTAATTATAACGAGA
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consensus AGTACGTGTTAAAGTGTCTTTCTTGGTCTTCTGCGTACAATTAAGCTAATTATAACGAGA

. : . : . : . : . : . :
JMSF045P04+ AAAATGGCGGCCGGACAAGACATAGAGAACGGAAAGAATGAAGGATCCACGGCGGGGATG
JMFF047J08+ AAAATGGCGGCCGGACAAGACATAGAGAACGGAAAGAATGAAGGATCCACGGCGGGGATG
JMFF029N02+ AAAATGGCGGCCGGACAAGACATAGAGAACGGAAAGAATGAAGGATCCACGGCGGGGATG
JMFF043E10+ AAAATGGCGGCCGGACAAGACATAGAGAACGGAAAGAATGAAGGATCCACGGCGGGGATG
JMSF038G12+ AAAATGGCGGCCGGACAAGACATAGAGAACGGAAAGAATGAAGGATCCACGGCGGGGATG
JMSF025C15+ AAAATGGCGGCCGGACAAGACATAGAGAACGGAAAGAATGAAGGATCCACGGCGGGGATG
JMFF051E12+ ATAGTGAACGGAGAGAATGAAGGATCCACGGCGGGGATG
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consensus AAAATGGCGGCCGGACAAGACATAGAGAACGGAAAGAATGAAGGATCCACGGCGGGGATG

. : . : . : . : . : . :
JMSF045P04+ GCGGCGCCGCTTATCGGAAAAGAAGATGACAGCAAGACCGATAGATGGATGGTTTACCTC
JMFF047J08+ GCGGCGCCGCTTATCGGAAAAGAAGATGACAGCAAGACCGATAGATGGATGGTTTACCTC
JMFF029N02+ GCGGCGCCGCTTATCGGAAAAGAAGATGACAGCAAGACCGATAGATGGATGGTTTACCTC
JMFF043E10+ GCGGCGCCGCTTATCGGAAAAGAAGATGACAGCAAGACCGATAGATGGATGGTTTACCTC
JMSF038G12+ GCGGCGCCGCTTATCGGAAAAGAAGATGACAGCAAGACCGATAGATGGATGGTTTACCTC
JMSF025C15+ GCGGCGCCGCTTATCGGAAAAGAAGATGACAGCAAGACCGATAGATGGATGGTTTACCTC
JMFF051E12+ GCGGCGCCGCTTATCGGAAAAGAAGATGACAGCAAGACCGATAGATGGATGGTTTACCTC
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consensus GCGGCGCCGCTTATCGGAAAAGAAGATGACAGCAAGACCGATAGATGGATGGTTTACCTC

. : . : . : . : . : . :
JMSF045P04+ AGCACATTTGTTGCTGTCTGCGGGTCGTGTGCATTTGGATCTTGTGCCGGTTATTCATCC
JMFF047J08+ AGCACATTTGTTGCTGTCTGCGGGTCGTGTGCATTTGGATCTTGTGCCGGTTATTCATCC
JMFF029N02+ AGCACATTTGTTGCTGTCTGCGGGTCGTGTGCATTTGGATCTTGTGCCGGTTATTCATCC
JMFF043E10+ AGCACATTTGTTGCTGTCTGCGGGTCGTGTGCATTTGGATCTTGTGCCGGTTATTCATTC
JMSF038G12+ AGCACATTTGTTGCTGTCTGCGGGTCGTGTGCATTTGGATCTTGTGCCGGTTATTCATCC
JMSF025C15+ AGCACATTTGTTGCTGTCTGCGGGTCGTGTGCATTTGGATCTTGTGCCGGTTATTCATCC
JMFF051E12+ AGCACATTTGTTGCTGTCTGCGGGTCGTGTGCATTTGGATCTTGTGCCGGTTATTCATCC
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consensus AGCACATTTGTTGCTGTCTGCGGGTCGTGTGCATTTGGATCTTGTGCCGGTTATTCATCC

. : . : . : . : . : . :
JMSF045P04+ CCGACTCAGTCTGCAATCAGCCAAGATCTCAACTTCTCCATTGCAGAGTACTCGCTGTTC
JMFF047J08+ CCGACTCAGTCTGCAATCAGCCAAGATCTCAACTTCTCCATTGCAGAGTACTCGCTGTTC
JMFF029N02+ CCGACTCAGTCTGCAATCAGCCAAGATCTCAACTTCTCCATTGCAGAGTACTCGCTGTTC
JMFF043E10+ CCGACTCAGTCTGCAATCAGCCAAGATCTCAACTTCTCCATTGCAGAGTACTCGCTGTTC
JMSF038G12+ CCGACTCAGTCTGCAATCAGCCAAGATCTCAACTTCTCCATTGCAGAGTACTCGCTGTTC
JMSF025C15+ CCGACTCAGTCTGCAATCAGCCAAGATCTCAACTTCTCCATTGCAGAGTACTCGCTGTTC
JMFF051E12+ CCGACTCAGTCTGCAATCAGCCAAGATCTCAACTTCTCCATTGCAGAGTACTCGCTGTTC
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consensus CCGACTCAGTCTGCAATCAGCCAAGATCTCAACTTCTCCATTGCAGAGTACTCGCTGTTC

. : . : . : . : . : . :
JMSF045P04+ GGCTCCATACTAACATTTGGTGCAATGGCGGGAGCAATCACAAGTGGTCCTATAGCTGAT
JMFF047J08+ GGCTCCATACTAACATTTGGTGCAATGGCGGGAGCAATCACAAGTGGTCCTATAGCTGAT
JMFF029N02+ GGCTCCATACTAACATTTGGTGCAATGGCGGGAGCAATCACAAGTGGTCCTATAGCTGAT
JMFF043E10+ GGCTCCATACTAACATTTGGTGCAATGGCGGGAGCAATCACAAGTGGTCCTATAGCTGAT
JMSF038G12+ GGCTCCATACTAACATTTGGTGCAATGGCGGGAGCAATCACAAGTGGTCCTATAGCTGAT
JMSF025C15+ GGCTCCATACTAACATTTGGTGCAATGGCGGGAGCAATCACAAGTGGTCCTATAGCTGAT
JMFF051E12+ GGCTCCATACTAACATTTGGTGCAATGGCGGGAGCAATCACAAGTGGTCCTATAGCTGAT
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consensus GGCTCCATACTAACATTTGGTGCAATGGCGGGAGCAATCACAAGTGGTCCTATAGCTGAT

. : . : . : . : . : . :
JMSF045P04+ TTCGTGGGTCGAAAAGGGGCAATGAGAATGTCTAGTGTTTTCTGTCTAGCAGGATGGCTT
JMFF047J08+ TTCGTGGGTCGAAAAGGGGCAATGAGAATGTCTAGTGTTTTCTGTCTAGCAGGATGGCTT
JMFF029N02+ TTCGTGGGTCGAAAAGGGGCAATGAGAATGTCTAGTGTTTTCTGTCTAGCAGGATGGCTT
JMFF043E10+ TTCGTGGGTCGAAAAGGGGCAATGAGAATGTCTAGTGTTTTCTGTCTAGCAGGATGGCTT
JMSF038G12+ TTCGTGGGTCGAAAAGGGGCAATGAGAATGTCTAGTGTTTTCTGTCTAGCAGGATGGCTT
JMSF025C15+ TTCGTGGGTCGAAAAGGGGCAATGAGAATGTCTAGTGTTTTCTGTCTAGCAGGATGGCTT
JMFF051E12+ TTCGTGGGTCGAAAAGGGCAAGAAAACGC------------------AGAAAACTGAACT
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consensus TTCGTGGGTCGAAAAGGGGCAATGAGAATGTCTAGTGTTTTCTGTCTAGCAGGATGGCTT

. : . : . : . : . : . :
JMSF045P04+ GCCATTTTTTTTGCTAAGGGGGCTTTGGTGATGGATATTGGAAGACTGGCAACAGGATAT
JMFF047J08+ GCCATTTTTTTTGCTAAGGGGGCTTTGGTGATGGATATTGGAAGACTGGCAACAGGATAT
JMFF029N02+ GCCATTTTTTTTGCTAAGGGGGCTTTGGTGATGGATATTGGAAGACTGGCAACAGGATAT
JMFF043E10+ GCCATTTTTTTTGCTAAGGGGGCTTTGGTGATGGATATTGGAAGACTGGCAACAGGATAT
JMSF038G12+ GCCATTTTTTT-GCTAAGGGGGCTTTGGTGATGGATATTGGAAGACTGGCAACAGGATAT
JMSF025C15+ GCCATTTTTTTTGCTAAGGGGGCTTTGGTGATGGATATTGGAAGACTGGCAACAGGATAT
JMFF051E12+ ATATTTACTCTTTTGAAGGGGGCTTTGGTGATGGATATTGGAAGACTGGCAACAGGATAT
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consensus GCCATTTTTTTTGCTAAGGGGGCTTTGGTGATGGATATTGGAAGACTGGCAACAGGATAT

. : . : . : . : . : . :
JMSF045P04+ GGAATGGGAGTCTTTTCTTATGTGGTACCTGTCTTTATAGCTGAAATCGCGCCCAAAGAA
JMFF047J08+ GGAATGGGAGTCTTTTCTTATGTGGTACCTGTCTTTATAGCTGAAATCGCGCCCAAAGAA
JMFF029N02+ GGAATGGGAGTCTTTTCTTATGTGGTACCTGTCTTTATAGCTGAAATCGCGCCCAAAGAA
JMFF043E10+ GGAATGGGAGTCTTTTCTTATGTGGTACCTGTCTTTATAGCTGANATCGCGCCCAAAGAA
JMSF038G12+ GGAATGGGAGTCTTTTCTTATGTGGTACCTGTCTTTATAGCTGAAATCGCGCCCAAAGAA
JMSF025C15+ GGAATGGGAGTCTTTTCTTATGCGGTACCTGTCTTTATAGCTGAAATCGCGCCCAAAGAA
JMFF051E12+ GGAATGGGAGTCTTTTCTTATGTGGTACCTGTCTTTATAGCTGAAATCGCGCCCAAAGAA
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consensus GGAATGGGAGTCTTTTCTTATGTGGTACCTGTCTTTATAGCTGAAATCGCGCCCAAAGAA

. : . : . : . : . : . :
JMSF045P04+ TTGCGAGGAGCTCTGACAACCTTAAACCAGCTTATGATAGTCACTGGAGTGTCAGTGGCC
JMFF047J08+ TTGCGAGGAGCTCTGACAACCTTAAACCAGCTTATGATAGTCACTGGAGTGTCAGTGGCC
JMFF029N02+ TTGCGAGGAGCTCTGACAACCTTAAACCAGCTTATGATAGTCACTGGAGTGTCAGTGGC
JMFF043E10+ TTGCGAGGAGCTCTGANCACCTTAAACCAGCTTATGATAGTCACTGGAGTGTCAGTGGCC
JMSF038G12+ TTGCGAGGAGCTCTGACAACCTTAAACCAGCTTATGATAGTCACTGGAGTGTCAGTGGCC
JMSF025C15+ TTGCGAGGAGCTCTGACAACCTTAAACCAGCTTATGATAGTCACTGGAGTGTCAGTGGCC
JMFF051E12+ TTGCGAGGAGCTCTGACAACCTTAAACCAGCTTATGATAGTCACTGGAGTGTCAGTGGCC
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consensus TTGCGAGGAGCTCTGACAACCTTAAACCAGCTTATGATAGTCACTGGAGTGTCAGTGGCC

. : . : . : . : . : . :
JMSF045P04+ TTCGTGATCGGAACAATGGTGACATGGAGGACTTTGGCACTAACAGGAATAGTTCCATGT
JMFF047J08+ TT
JMFF043E10+ TTCGTGATCGGAACAATGG
JMSF038G12+ TTCGTGAT
JMSF025C15+ TTCGTGATCGGAACAATGGTGACATGGAGGACTTTGGCACTAACAGGAATAGTTCCATGT
JMFF051E12+ TTCGTGATCGGAACAATGGTGACATGGAGGACTTTGGCACTAACAGGAATAGNTCCATGT
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consensus TTCGTGATCGGAACAATGGTGACATGGAGGACTTTGGCACTAACAGGAATAGTTCCATGT

. : . : . : . : . : . :
JMSF045P04+ GTTGTTCTTG
JMFF051E12+ GTTGTTCTTGGTTTGGGCCTCTGCATCATTCC
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consensus GTTGTTCTTGGTTTGGGCCTCTGCATCATTCC