Alignment Contig 1067

                          .    :    .    :    .    :    .    :    .    :    .    :

rJMFF012D07+ TAGACTACCAAATTGAGGTACAATATTATATATAAATACACAAACTGACTGGTTTGCTCA
rJMFF049P04+ AGACTACCAAATTGAGGTACAATATTATATATAAATACACAAACTGACTGGTTTGCTCA
JMFN031F05- GAGGTACAATATTATATATAAATACACAAACTGACTGGTTTGCTCA
rJMSF034O24+ GAGGTACAATATTATATATAAATACACAAACTGACTGGTTTGCTCA
rJMSF008F06+ ATATTATATATAAATACACAAACTGACTGGTTTGCTCA
rJMFF006E14+ CAAACTGACTGGTTTGCTCA
rJMSF009N03+ AAACTGACTGGTTTGCTCA
rJMSF023M20+ AACTGACTGGTTTGCTCA
rJMSF029C14+ ATATTATATATAAATACACAAACTGACTGGTTTGCTCA
rJMSF033N21+ ATATTATATATAAATACACAAACTGACTGGTTTGCTCA
rJMFF028J08+ TGACTGGTTTGCTCA
rJMSF049D21+ CTGGTTTGCTCA
rJMSF043C13+ ATATTATATATAAATACACAAACTGACTGGTTTGCTCA
rJMSF002L05+ GACTGGTTTGCTCA
rJMSF001B18+ CA
rJMSF051O21+ TGGTTTGCTCA
____________________________________________________________
consensus TAGACTACCAAATTGAGGTACAATATTATATATAAATACACAAACTGACTGGTTTGCTCA

. : . : . : . : . : . :
rJMFF012D07+ TCGATCGGATAGGGGGTTGTTATTTAGAACAGAACACACACTG-ACTGACAAAAAACAAA
rJMFF049P04+ TCGATCGGATAGGGGGTTGTTATTTAGAACAGAACACACACTG-ACTGACAAAAAACAAA
JMFN031F05- TCGATCGGATAGGGGGTTGTTATTTAGAACAGAACACACACTG-ACTGACAAAAAACAAA
rJMSF034O24+ TCGATCGGATAGGGGGTTGTTATTTAGAACAGAACACACACTG-ACTGACAAAAAACAAA
rJMSF008F06+ TCGATCGGATAGGGGGTTGTTATTTAGAACAGAACACACACTG-ACTGACAAAAAACAAA
rJMFF006E14+ TCGATCGGATAGGGGGTTGTTATTTAGAACAGAACACACACTG-ACTGACAAAAAACAAA
rJMSF009N03+ TCGATCGGATAGGGGGTTGTTATTTAGAACAGAACACACACTG-ACTGACAAAAAACAAA
rJMSF023M20+ TCGATCGGATAGGGGGTTGTTATTTAGAACAGAACACACACTG-ACTGACAAAAAACAAA
rJMSF029C14+ TCGATCGGATAGGGGGTTGTTATTTAGAACAGAACACACACTG-ACTGACAAAAAACAAA
rJMSF033N21+ TCGATCGGATAGGGGGTTGTTATTTAGAACAGAACACACACTG-ACTGACAAAAAACAAA
rJMFF028J08+ TCGATCGGATAGGGGGTTGTTATTTAGAACAGAACACACACTG-ACTGACAAAAAACAAA
rJMSF049D21+ TCGATCGGATAGGGGGTTGTTATTTAGAACAGAACACACACTG-ACTGACAAAAAACAAA
rJMSF043C13+ TCGATCGGATAGGGGGTTGTTATTTAGAACAGAACACACACTG-ACTGACAAAAAACAAA
rJMSF027H03+ G-ACTGACAAAAAACAAA
rJMSF002L05+ TCGATCGGATAGGGGGTTGTTATTTAGAACAGAACACACACTG-ACTGACAAAAAACAAA
rJMSF001B18+ TCGATCGGATAGGGGGTTGTTATTTAGAACAGAACACACACTGGACTGACAAAAAACAAA
rJMSF051O21+ TCGATCGGATAGGGGGTTGTTATTTAGAACAGAACACACACTG-ACTGACAAAAAACAAA
rJMSF009K24+ AAA
____________________________________________________________
consensus TCGATCGGATAGGGGGTTGTTATTTAGAACAGAACACACACTG-ACTGACAAAAAACAAA

. : . : . : . : . : . :
rJMFF012D07+ AGGGTGGGTAGGAGGTGTGTATTTAAATTTTAAGGTAAGGTAATACTTATTATTTAACAA
rJMFF049P04+ AGGGTGGGTAGGAGGTGTGTATTTAAATTTTAAGGTAAGGTAATACTTATTATTTAACAA
JMFN031F05- AGGGTGGGTAGGAGGTGTGTATTTAAATTTTAAGGTAAGGTAATACTTATTATTTAACAA
rJMSF034O24+ AGGGTGGGTAGGAGGTGTGTATTTAAATTTTAAGGTAAGGTAATACTTATTATTTAACAA
rJMSF008F06+ AGGGTGGGTAGGAGGTGTGTATTTAAATTTTAAGGTAAGGTAATACTTATTATTTAACAA
rJMFF006E14+ AGGGTGGGTAGGAGGTGTGTATTTAAATTTTAAGGTAAGGTAATACTTATTATTTAACAA
rJMSF009N03+ AGGGTGGGTAGGAGGTGTGTATTTAAATTTTAAGGTAAGGTAATACTTATTATTTAACAA
rJMSF023M20+ AGGGTGGGTAGGAGGTGCGTATTTAAATTTTAAGGTAAGGTAATACTTATTATTTAACAA
rJMSF029C14+ AGGGTGGGTAGGAGGTGTGTATTTAAATTTTAAGGTAAGGTAATACTTATTATTTAACAA
rJMSF033N21+ AGGGTGGGTAGGAGGTGTGTATTTAAATTTTAAGGTAAGGTAATACTTATTATTTAACAA
rJMFF028J08+ AGGGTGGGTAGGAGGTGTGTATTTAAATTTTAAGGTAAGGTAATACTTATTATTTAACAA
rJMSF049D21+ AGGGTGGGTAGGAGGTGTGTATTTAAATTTTAAGGTAAGGTAATACTTATTATTTAACAA
rJMSF043C13+ AGGGTGGGTAGGAGGTGTGTATTTAAATTTTAAGGTAAGGTAATACTTATTATTTAACAA
rJMSF035H01+ ATACTTATTATTTAACAA
rJMSF027H03+ AGGGTGGGTAGGAGGTGTGTATTTAAATTTTAAGGTAAGGTAATACTTATTATTTAACAA
rJMSF002L05+ AGGGTGGGTAGGAGGTGTGTATTTAAATTTTAAGGTAAGGTAATACTTATTATTTAACAA
rJMSF001B18+ AGGGTGGGTAGGAGGTGTGTATTTAAATTTTAAGGTAAGGTAATACTTATTATTTAACAA
rJMSF051O21+ AGGGTGGGTAGGAGGTGTGTATTTAAATTTTAAGGTAAGGTAATACTTATTATTTAACAA
rJMSF009K24+ AGGGTGGGTAGGAGGTGTGTATTTAAATTTTAAGGTAAGGTAATACTTATTATTTAACAA
JMFN012A01- TTTTAAGGTAAGGTAATACTTATTATTTAACAA
____________________________________________________________
consensus AGGGTGGGTAGGAGGTGTGTATTTAAATTTTAAGGTAAGGTAATACTTATTATTTAACAA

. : . : . : . : . : . :
rJMFF012D07+ CAG-TCAGCTACAAAAGAAGAAATCTCTTCTCTCCCAATCTTATCTTTCTCGGATTGTGA
rJMFF049P04+ CAG-TCAGCTACAAAAGAAGAAATCTCTTCTCTCCCAATCTTATCTTTCTCGGATTGTGA
JMFN031F05- CAG-TCAGCTACAAAAGAAGAAATCTCTTCTCTCCCAATCTTATCTTTCTCGGATTGTGA
rJMSF034O24+ CAG-TCAGCTACAAAAGAAGAAATCTCTTCTCTCCCAATCTTATCTTTCTCGGATTGTGA
rJMSF008F06+ CAG-TCAGCTACAAAAGAAGAAATCTCTTCTCTCCCAATCTTATCTTTCTCGGATTGTGA
rJMFF006E14+ CAG-TCAGCTACAAAAGAAGAAATCTCTTCTCTCCCAATCTTATCTTTCTCGGATTGTGA
rJMSF009N03+ CAG-TCAGCTACAAAAGAAGAAATCTCTTCTCTCCCAATCTTATCTTTCTCGGATTGTGA
rJMSF023M20+ CAG-TCAGCTACAAAAGAAGAAATCTCTTCTCTCCCAATCTTATCTTTCTCGGATTGTGA
rJMSF029C14+ CAG-TCAGCTACAAAAGAAGAAATCTCTTCTCTCCCAATCTTATCTTTCTCGGATTGTGA
rJMSF033N21+ CAG-TCAGCTACAAAAGAAGAAATCTCTTCTCTCCCAATCTTATCTTTCTCGGATTGTGA
rJMFF028J08+ CAG-TCAGCTACAAAAGAAGAAATCTCTTCTCTCCCAATCTTATCTTTCTCGGATTGTGA
rJMSF049D21+ CAG-TCAGCTACAAAAGAAGAAATCTCTTCTCTCCCAATCTTATCTTTCTCGGATTGTGA
rJMSF043C13+ CAG-TCAGCTACAAAAGAAGAAATCTCTTCTCTCCCAATCTTATCTTTCTCGGATTGTGA
rJMSF035H01+ CAGGTCAGCTACAAAAGAAGAAATCTCTTCTCTCCCAATCTTATCTTTCTCGGATTGTGA
rJMSF027H03+ CAG-TCAGCTACAAAAGAAGAAATCTCTTCTCTCCCAATCTTATCTTTCTCGGATTGTGA
rJMSF002L05+ CAG-TCAGCTACAAAAGAAGAAATCTCTTCTCTCCCAATCTTATCTTTCTCGGATTGTGA
rJMSF001B18+ CAG-TCAGCTACAAAAGAAGAAATCTCTTCTCTCCCAATCTTATCTTTCTCGGATTGTGA
rJMSF051O21+ CAG-TCAGCTACAAAAGAAGAAATCTCTTCTCTCCCAATCTTATCTTTCTCGGATTGTGA
rJMSF009K24+ CAG-TCAGCTACAAAAGAAGAAATCTCTTCTCTCCCAATCTTATCTTTCTCGGATTGTGA
JMFN012A01- CAG-TCAGCTACAAAAGAAGAAATCTCTTCTCTCCCAATCTTATCTTTCTCGGATTGTGA
JMFN029O09- ACAAAAGAAGAAATCTCTCTTCTCCCAATCTTATCTTTCTCGGATTGTGA
____________________________________________________________
consensus CAG-TCAGCTACAAAAGAAGAAATCTCTTCTCTCCCAATCTTATCTTTCTCGGATTGTGA

. : . : . : . : . : . :
rJMFF012D07+ TCTGATCGATCTCATGCAGCAACAGGGACAGCCTCGTCAAGAGCAATAACGCCGGGGAGC
rJMFF049P04+ TCTGATCGATCTCATGCAGCAACAGGGACAGCCTCGTCAAGAGCAATAACGCCGGGGAGC
JMFN031F05- TCTGATCGATCTCATGCAGCAACAGGGACAGCCTCGTCAAGAGCAATAACGCCGGGGAGC
rJMSF034O24+ TCTGATCGATCTCATGCAGCAACAGGGACAGCCTCGTCAAGAGCAATAACGCCGGGGAGC
rJMSF008F06+ TCTGATCGATCTCATGCAGCAACAGGGACAGCCTCGTCAAGAGCAATAACGCCGGGGAGC
rJMFF006E14+ TCTGATCGATCTCATGCAGCAACAGGGACAGCCTCGTCAAGAGCAATAACGCCGGGGAGC
rJMSF009N03+ TCTGATCGATCTCATGCAGCAACAGGGACAGCCTCGTCAAGAGCAATAACGCCGGGGAGC
rJMSF023M20+ TCTGATCGATCTCATGCAGCAACAGGGACAGCCTCGTCAAGAGCAATAACGCCGGGGAGC
rJMSF029C14+ TCTGATCGATCTCATGCAGCAACAGGGACAGCCTCGTCAAGAGCAATAACGCCGGGGAGC
rJMSF033N21+ TCTGATCGATCTCATGCAGCAACAGGGACAGCCTCGTCAAGAGCAATAACGCCGGGGAGC
rJMFF028J08+ TCTGATCGATCTCATGCAGCAACAGGGACAGCCTCGTCAAGAGCAATAACGCCGGGGAGC
rJMSF049D21+ TCTGATCGATCTCATGCAGCAACAGGGACAGCCTCGTCAAGAGCAATAACGCCGGGGAGC
rJMSF043C13+ TCTGATCGATCTCATGCAGCAACAGGGACAGCCTCGTCAAGAGCAATAACGCCGGGGAGC
rJMSF035H01+ TCTGATCGATCTCATGCAGCAACAGGGACAGCCTCGTCAAGAGCAATAACGCCGGGGAGC
rJMSF027H03+ TCTGATCGATCTCATGCAGCAACAGGGACAGCCTCGTCAAGAGCAATAACGCCGGGGAGC
rJMSF002L05+ TCTGATCGATCTCATGCAGCAACAGGGACAGCCTCGTCAAGAGCAATAACGCCGGGGAGC
rJMSF001B18+ TCTGATCGATCTCATGCAGCAACAGGGACAGCCTCGTCAAGAGCAATAACGCCGGGGAGC
rJMSF051O21+ TCTGATCGATCTCATGCAGCAACAGGGACAGCCTCGTCAAGAGCAATAACGCCGGGGAGC
rJMSF009K24+ TCTGATCGATCTCATGCAGCAACAGGGACAGCCTCGTCAAGAGCAATAACGCCGGGGAGC
JMFN012A01- TCTGATCGATCTCATGCAGCAACAGGGACAGCCTCGTCAAGAGCAATAACGCCGGGGAGC
JMFN029O09- TCTGATCGATCTCATGCAGCAACAGGGACAGCCTCGTCAAGAGCAATAACGCCGGGGAGC
____________________________________________________________
consensus TCTGATCGATCTCATGCAGCAACAGGGACAGCCTCGTCAAGAGCAATAACGCCGGGGAGC

. : . : . : . : . : . :
rJMFF012D07+ TCTTTTCCTTCCAACAGCTCCAAACTAGCACCACCTCCGGTTGAAATGTGGCTCATCACG
rJMFF049P04+ TCTTTTCCTTCCAACAGCTCCAAACTAGCACCACCTCCGGTTGAAATGTGGCTCATCACG
JMFN031F05- TCTTTTCCTTCCAACAGCTCCAAACTAGCACCACCTCCGGTTGAAATGTGGCTCATCACG
rJMSF034O24+ TCTTTTCCTTCCAACAGCTCCAAACTAGCACCACCTCCGGTTGAAATGTGGCTCATCACG
rJMSF008F06+ TCTTTTCCTTCCAACAGCTCCAAACTAGCACCACCTCCGGTTGAAATGTGGCTCATCACG
rJMFF006E14+ TCTTTTCCTTCCAACAGCTCCAAACTAGCACCACCTCCGGTTGAAATGTGGCTCATCACG
rJMSF009N03+ TCTTTTCCTTCCAACAGCTCCAAACTAGCACCACCTCCGGTTGAAATGTGGCTCATCACG
rJMSF023M20+ TCTTTTCCTTCCAACAGCTCCAAACTAGCACCACCTCCGGTTGAAATGTGGCTCATCACG
rJMSF029C14+ TCTTTTCCTTCCAACAGCTCCAAACTAGCACCACCTCCGGTTGAAATGTGGCTCATCACG
rJMSF033N21+ TCTTTTCCTTCCAACAGCTCCAAACTAGCACCACCTCCGGTTGAAATGTGGCTCATCACG
rJMFF028J08+ TCTTTTCCTTCCAACAGCTCCAAACTAGCACCACCTCCGGTTGAAATGTGGCTCATCACG
rJMSF049D21+ TCTTTTCCTTCCAACAGCTCCAAACTAGCACCACCTCCGGTTGAAATGTGGCTCATCACG
rJMSF043C13+ TCTTTTCCTTCCAACAGCTCCAAACTAGCACCACCTCCGGTTGAAATGTGGCTCATCACG
rJMSF035H01+ TCTTTTCCTTCCAACAGCTCCAAACTAGCACCACCTCCGGTTGAAATGTGGCTCATCACG
rJMSF027H03+ TCTTTTCCTTCCAACAGCTCCAAACTAGCACCACCTCCGGTTGAAATGTGGCTCATCACG
rJMSF002L05+ TCTTTTCCTTCCAACAGCTCCAAACTAGCACCACCTCCGGTTGAAATGTGGCTCATCACG
rJMSF001B18+ TCTTTTCCTTCCAACAGCTCCAAACTAGCACCACCTCCGGTTGAAATGTGGCTCATCACG
rJMSF051O21+ TCTTTTCCTTCCAACAGCTCCAAACTAGCACCACCTCCGGTTGAAATGTGGCTCATCACG
rJMSF009K24+ TCTTTTCCTTCCAACAGCTCCAAACTAGCACCACCTCCGGTTGAAATGTGGCTCATCACG
JMFN012A01- TCTTTTCCTTCCAACAGCTCCAAACTAGCACCACCTCCGGTTGAAATGTGGCTCATCACG
JMFN029O09- TCTTTTCCTTCCAACAGCTCCAAACTAGCACCACCTCCGGTTGAAATGTGGCTCATCACG
____________________________________________________________
consensus TCTTTTCCTTCCAACAGCTCCAAACTAGCACCACCTCCGGTTGAAATGTGGCTCATCACG

. : . : . : . : . : . :
rJMFF012D07+ CTAGCAACTCCAACTTTCTCTACTGCTGCAACTGAGTCTCCACCTCCGATAATGGTCGTC
rJMFF049P04+ CTAGCAACTCCAACTTTCTCTACTGCTGCAACTGAGTCTCCACCTCCGATAATGGTCGTC
JMFN031F05- CTAGCAACTCCAACTTTCTCTACTGCTGCAACTGAGTCTCCACCTCCGATAATGGTCGTC
rJMSF034O24+ CTAGCAACTCCAACTTTCTCTACTGCTGCAACTGAGTCTCCACCTCCGATAATGGTCGTC
rJMSF008F06+ CTAGCAACTCCAACTTTCTCTACTGCTGCAACTGAGTCTCCACCTCCGATAATGGTCGTC
rJMFF006E14+ CTAGCAACTCCAACTTTCTCTACTGCTGCAACTGAGTCTCCACCTCCGATAATGGTCGTC
rJMSF009N03+ CTAGCAACTCCAACTTTCTCTACTGCTGCAACTGAGTCTCCACCTCCGATAATGGTCGTC
rJMSF023M20+ CTAGCAACTCCAACTTTCTCTACTGCTGCAACTGAGTCTCCACCTCCGATAATGGTCGTC
rJMSF029C14+ CTAGCAACTCCAACTTTCTCTACTGCTGCAACTGAGTCTCCACCTCCGATAATGGTCGTC
rJMSF033N21+ CTAGCAACTCCAACTTTCTCTACTGCTGCAACTGAGTCTCCACCTCCGATAATGGTCGTC
rJMFF028J08+ CTAGCAACTCCAACTTTCTCTACTGCTGCAACTGAGTCTCCACCTCCGATAATGGTCGTC
rJMSF049D21+ CTAGCAACTCCAACTTTCTCTACTGCTGCAACTGAGTCTCCACCTCCGATAATGGTCGTC
rJMSF043C13+ CTAGCAACTCCAACTTTCTCTACTGCTGCAACTGAGTCTCCACCTCCGATAATGGTCGTC
rJMSF035H01+ CTAGCAACTCCAACTTTCTCTACTGCTGCAACTGAGTCTCCACCTCCGATAATGGTCGTC
rJMSF027H03+ CTAGCAACTCCAACTTTCTCTACTGCTGCAACTGAGTCTCCACCTCCGATAATGGTCGTC
rJMSF002L05+ CTAGCAACTCCAACTTTCTCTACTGCTGCAACTGAGTCTCCACCTCCGATAATGGTCGTC
rJMSF001B18+ CTAGCAACTCCAACTTTCTCTACTGCTGCAACTGAGTCTCCACCTCCGATAATGGTCGTC
rJMSF051O21+ CTAGCAACTCCAACTTTCTCTACTGCTGCAACTGAGTCTCCACCTCCGATAATGGTCGTC
rJMSF009K24+ CTAGCAACTCCAACTTTCTCTACTGCTGCAACTGAGTCTCCACCTCCGATAATGGTCGTC
JMFN012A01- CTAGCAACTCCAACTTTCTGTACTGCTGCAAGTGAGTCTCCACCTCCGATAATGGTGGTC
JMFN029O09- CTAGCAACTCCAACTTTCTCTACTGCTGCAACTGAGTCTCCACCTCCGATAATGGTCGTC
____________________________________________________________
consensus CTAGCAACTCCAACTTTCTCTACTGCTGCAACTGAGTCTCCACCTCCGATAATGGTCGTC

. : . : . : . : . : . :
rJMFF012D07+ ACTCCTTTCCCACTCAGTTCAGCAAGCTTCTTTG--ACTGACTCTGTGCCTACTGCAAAT
rJMFF049P04+ ACTCCTTTCCCACTCAGTTCAGCAAGCTTCTTTGCTACTGACTCTGTGCCTACTGCAAAT
JMFN031F05- ACTCCTTTCCCACTCAGTTCAGCAAGCTTCTTTGCTACTGACTCTGTGCC
rJMSF034O24+ ACTCCTTTCCCACTCAGTTCAGCAAGCTTCTTTGCTACTGACTCTGTGCCTACTGCAAAT
rJMSF008F06+ ACTCCTTTCCCACTCAGTTCAGCAAGCTTCTTTGCTACTGACTCTGTGCCTACTGCAAAT
rJMFF006E14+ ACTCCTTTCCCACTCAGTTCAGCAAGCTTCTTTGCTACTGACTCTGTGCCTACTGCAAAT
rJMSF009N03+ ACTCCTTTCCCACTCAGTTCAGCAAGCTTCTTTGCTACTGACTCTGTGCCTACTGCAAAT
rJMSF023M20+ ACTCCTTTCCCACTCAGTTCAGCAAGCTTCTTTGCTACTGACTCTGTGCCTACTGCAAAT
rJMSF029C14+ ACTCCTTTCCCACTCAGTTCAGCAAGCTTCTTTGCTACTGACTCTGTGCCTACTGCAAAT
rJMSF033N21+ ACTCCTTTCCCACTCAGTTCAGCAAGCTTCTTTGCTACTGACTCTGTGCCTACTGCAAAT
rJMFF028J08+ ACTCCTTTCCCACTCAGTTCAGCAAGCTTCTTTGCTACTGACTCTGTGCCTACTGCAAAT
rJMSF049D21+ ACTCCTTTCCCACTCAGTTCAGCAAGCTTCTTTGCTACTGACTCTGTGCCTACTGCAAAT
rJMSF043C13+ ACTCCTTTCCCACTCAGTTCAGCAAGCTTCTTTGCTACTGACTCTGTGCCTACTGCAAAT
rJMSF035H01+ ACTCCTTTCCCACTCAGTTCAGCAAGCTTCTTTGCTACTGACTCTGTGCCTACTGCAAAT
rJMSF027H03+ ACTCCTTTCCCACTCAGTTCAGCAAGCTTCTTTGCTACTGACTCTGTGCCTACTGCAAAT
rJMSF002L05+ ACTCCTTTCCCACTCAGTTCAGCAAGCTTCTTTGCTACTGACTCTGTGCCTACTGCAAAT
rJMSF001B18+ ACTCCTTTCCCACTCAGTTCAGCAAGCTTCTTTGCTACTGACTCTGTGCCTACTGCAAAT
rJMSF051O21+ ACTCCTTTCCCACTCAGTTCAGCAAGCTTCTTTGCTACTGACTCTGTGCCTACTGCAAAT
rJMSF009K24+ ACTCCTTTCCCACTCAGTTCAGCAAGCTTCTTTGCTACTGACTCTGTGCCTACTGCAAAT
JMFN012A01- ACTCCTTTCCCACTCAGTTCAGCAAGCTTCTTTGCTACTGACTCTGTGCCTACTGCAAAT
JMFN029O09- ACTCCTTTCCCACTCAGTTCAGCAAGCTTCTTTGCTACTGACTCTGTGCCTACTGCAAAT
____________________________________________________________
consensus ACTCCTTTCCCACTCAGTTCAGCAAGCTTCTTTGCTACTGACTCTGTGCCTACTGCAAAT

. : . : . : . : . : . :
rJMFF012D07+ TTGTCAAATTCAAACACTCCCATTGGTCCATTCCAAATCACAGTTTTTGTTGTCTCCAAC
rJMFF049P04+ TTGTCAAATTCAAACACTCCCATTGGTCCATTCCAAATCACAGTTTTTGTTGTCTCCAAC
rJMSF034O24+ TTGTCAAATTCAAACACTCCCATTGGTCCATTCCAAATCACAGTTTTTGTTGTCTCCAAC
rJMSF008F06+ TTGTCAAATTCAAACACTCCCATTGGTCCATTCCAAATCACAGTTTTTGTTGTCTCCAAC
rJMFF006E14+ TTGTCAAATTCAAACACTCCCATTGGTCCATTCCAAATCACAGTTTTTGTTGTCTCCAAC
rJMSF009N03+ TTGTCAAATTCAAACACTCCCATTGGTCCATTCCAAATCACAGTTTTTGTTGTCTCCAAC
rJMSF023M20+ TTGTCAAATTCAAACACTCCCATTGGTCCATTCCAAATCACAGTTTTTGTTGTCTCCAAC
rJMSF029C14+ TTGTCAAATTCAAACACTCCCATTGGTCCATTCCAAATCACAGTTTTTGTTGTCTCCAAC
rJMSF033N21+ TTGTCAAATTCAAACACTCCCATTGGTCCATTCCAAATCACAGTTTTTGTTGTCTCCAAC
rJMFF028J08+ TTGTCAAATTCAAACACTCCCATTGGTCCATTCCAAATCACAGTTTTTGTTGTCTCCAAC
rJMSF049D21+ TTGTCAAATTCAAACACTCCCATTGGTCCATTCCAAATCACAGTTTTTGTTGTCTCCAAC
rJMSF043C13+ TTGTCAAATTCAAACACTCCCATTGGTCCATTCCAAATCACAGTTTTTGTTGTCTCCAAC
rJMSF035H01+ TTGTCAAATTCAAACACTCCCATTGGTCCATTCCAAATCACAGTTTTTGTTGTCTCCAAC
rJMSF027H03+ TTGTCAAATTCAAACACTCCCATTGGTCCATTCCAAATCACAGTTTTTGTTGTCTCCAAC
rJMSF002L05+ TTGTCAAATTCAAACACTCCCATTGGTCCATTCCAAATCACAGTTTTTGT---CTCCAAC
rJMSF001B18+ TTGTCAAATTCAAACACTCCCATTGGTCCATTCCAAATCACAGTTTTTGTTGTCTCCAAC
rJMSF051O21+ TTGTCAAATTCAAACACTCCCATTGGTCCATTCCAAATCACAGTTTTTGTTGTCTCCAAC
rJMSF009K24+ TTGTCAAATTCAAACACTCCCATTGGTCCATTCCAAATCACAGTTTTTGTTGTCTCCAAC
JMFN012A01- TTGTCAAATTCAAACACTCCCATTGGTCCATTCCAAATCACAGTTTTTGTTGTCTCCAAC
JMFN029O09- TTGTCAAATTCAAACACTCCCATTGGTCCATTCCAAATCACAGTTTTTGTTGTCTCCAAC
____________________________________________________________
consensus TTGTCAAATTCAAACACTCCCATTGGTCCATTCCAAATCACAGTTTTTGTTGTCTCCAAC

. : . : . : . : . : . :
rJMFF012D07+ GCATCATTGCAAGTCTTGACAGAGTCCGGTCCAATGTCCAATCCCATCCAACCATCTGGG
rJMFF049P04+ GCATCATTGAAAGTCTTGACAGAGTCCGGTCCAATGTCCAATCCCATCCAACCATCTGGG
rJMSF034O24+ GCATCATTGAAAGTCTTGACAGAGTCCGGTCCAATGTCCAATCCCATCCAACCATCTGGG
rJMSF008F06+ GCATCATTGAAAGTCTTGACAGAGTCCGGTCCAATGTCCAATCCCATCCAACCATCTGGG
rJMFF006E14+ GCATCATTGAAAGTCTTGACAGAGTCCGGTCCAATGTCCAATCCCATCCAACCATCTGGG
rJMSF009N03+ GCATCATTGAAAGTCTTGACAGAGTCCGGTCCAATGTCCAATCCCATCCAACCATCTGGG
rJMSF023M20+ GCATCATTGAAAGTCTTGACAGAGTCCGGTCCAATGTCCAATCCCATCCAACCATCTGGG
rJMSF029C14+ GCATCATTGAAAGTCTTGACAGAGTCCGGTCCAATGTCCAATCCCATCCAACCATCTGGG
rJMSF033N21+ GCATCATTGAAAGTCTTGACAGAGTCCGGTCCAATGTCCAATCCCATCCAACCATCTGGG
rJMFF028J08+ GCATCATTGAAAGTCTTGACAGAGTCCGGTCCAATGTCCAATCCCATCCAACCATCTGGG
rJMSF049D21+ GCATCATTGAAAGTCTTGACAGAGTCCGGTCCAATGTCCAATCCCATCCAACCATCTGGG
rJMSF043C13+ GCATCATTGAAAGTCTTGACAGAGTCCGGTCCAATGTCCAATCCCATCCAACCATCTGGG
rJMSF035H01+ GCATCATTGAAAGTCTTGACAGAGTCCGGTCCAATGTCCAATCCCATCCAACCATCTGGG
rJMSF027H03+ GCATCATTGAAAGTCTTGACAGAGTCCGGTCCAATGTCCAATCCCATCCAACCATCTGGG
rJMSF002L05+ GCATCATTGAAAGTCTTGACAGAGTCCGGTCCAATGTCCAATCCCATCCAACCATCTGGG
rJMSF001B18+ GCATCATTGAAAGTCTTGACAGAGTCCGGTCCAATGTCCAATCCCATCCAACCATCTGGG
rJMSF051O21+ GCATCATTGAAAGTCTTGACAGAGTCCGGTCCAATGTCCAATCCCATCCAACCATCTGGG
rJMSF009K24+ GCATCATTGAAAGTCTTGACAGAGTCCGGTCCAATGTCCAATCCCATCCAACCATCTGGG
JMFN012A01- GCATCATTGAAAGTCTTGACAGAGTCCGGTCCAATGTCCAATCCCATCCAACCATCTGGG
JMFN029O09- GCATCATTGAAAGTCTTGACAGAGTCCGGTCCAATGTCCAATCCCATCCAACCATCTGGG
____________________________________________________________
consensus GCATCATTGAAAGTCTTGACAGAGTCCGGTCCAATGTCCAATCCCATCCAACCATCTGGG

. : . : . : . : . : . :
rJMFF012D07+ ATAGCAGATGCCGGAACAACCTTACTGTTTGCATCAGGAGCAAATTTATCTGCGATAACC
rJMFF049P04+ ATAGCAGATGCCGGAACAA
rJMSF034O24+ ATAGCAGATGCCGGAACAACCTTACTGTTTGCATCAGGAGCAAATTTATCTGCGATAACC
rJMSF008F06+ ATAGCAGATGCCGGAACAACCTTACTGTTTGCATCAGGAGCAAATTTATCTGCGATAACC
rJMFF006E14+ ATAGCAGATGCCGGAACAACCTTACTGTTTGCATCAGGAGCAAATTTATCTGCGATAACC
rJMSF009N03+ ATAGCAGATGCCGGAACAACCTTACTGTTTGCATCAGGAGCAAATTTATCTGCGATAACC
rJMSF023M20+ ATAGCAGATGCCGGAACAACCTTACTGTTTGCATCAGGAGCAAATTTATCTGCGATAACC
rJMSF029C14+ ATAGCAGATGCCGGAACAACCTTACTGTTTGCATCAGGAGCAAATTTATCTGCGATAACC
rJMSF033N21+ ATAGCAGATGCCGGAACAACCTTACTGTTTGCATCAGGAGCAAATTTATCTGCGATAACC
rJMFF028J08+ ATAGCAGATGCCGGAACAACCTTACTGTTTGCATCAGGAGCAAATTTATCTGCGATAACC
rJMSF049D21+ ATAGCAGATGCCGGAACAACCTTACTGTTTGCATCAGGAGCAAATTTATCTGCGATAACC
rJMSF043C13+ ATAGCAGATGCCGGAACAACCTTACTGTTTGCATCAGGAGCAAATTTATCTGCGATAACC
rJMSF035H01+ ATAGCAGATGCCGGAACAACCTTACTGTTTGCATCAGGAGCAAATTTATCTGCGATAACC
rJMSF027H03+ ATAGCAGATGCCGGAACAACCTTACTGTTTGCATCAGGAGCAAATTTATCTGCGATAACC
rJMSF002L05+ ATAGCAGATGCCGGAACAACCTTACTGTTTGCATCAGGAGCAAATTTATCTGCGATAACC
rJMSF001B18+ ATAGCAGATGCCGGAACAACCTTACTGTTTGCATCAGGAGCAAATTTATCTGCGATAACC
rJMSF051O21+ ATAGCAGATGCCGGAACAACCTTACTGTTTGCATCAGGAGCAAATTTATCTGCGATAACC
rJMSF009K24+ ATAGCAGATGCCGGAACAACCTTACTGTTTGCATCAGGAGCAAATTTATCTGCGATAACC
JMFN012A01- ATAGCAGATGCCGGAACAACCTTACTGTTTGCATCAGGAGCAAATTTATCTGCGATAACC
JMFN029O09- ATAGCAGATGCCGGAACAACCTTACTGTTTGCATCAGGAGCAAATTTATCTGCGATAACC
____________________________________________________________
consensus ATAGCAGATGCCGGAACAACCTTACTGTTTGCATCAGGAGCAAATTTATCTGCGATAACC

. : . : . : . : . : . :
rJMFF012D07+ ACATCTGTAGGTAACAATAGACTGACACCCTTGGCTTTAGCCTTCTCAAGGAGTGATGTA
rJMSF034O24+ ACATCTGT
rJMSF008F06+ ACATCTGTAGGTAACAATAGACTGACACCCTTGGCTTTAGCCTTCTCAAGGAGTGATGTA
rJMFF006E14+ ACATCTGTAGGTAACAATAGACTGACACCCTTGGCTTTAGCCTTCTCAAGGAGTGATGTA
rJMSF009N03+ ACATCTGTAGGTAACAATAGACTGACACCCTTGGCTTTAGCCTTCTCAAGGAGTGATGTA
rJMSF023M20+ ACATCTGTAGGTAACAATAGACTGACACCCTTGGCTTTAGCCTTCTCAAGGAGTGATGTA
rJMSF029C14+ ACATCTGTAGGTAACAATAGACTGACACCCTTGGCTTTAGCCTTCTCAAGGAGTGATGTA
rJMSF033N21+ ACATCTGTA
rJMFF028J08+ ACATCTGTAGGTAACAATAGACTGACACCCTTGGCTTTAGCCTTCTCAAGGAGTGATGTA
rJMSF049D21+ ACATCTGTAGGTAACAATAGACTGACACCCTTGGCTTTAGCCTTCTCAAGGAGTGATGTA
rJMSF043C13+ ACATCTGTAGGTAACAATAGACTGACACCCTTGGCTTTAGCCTTCTCAAGGAGTGATGTA
rJMSF035H01+ ACATCTGTAGGTAACAATAGACTGACACCCTTGGCTTTAGCCTTCTCAAGGAGTGATGTA
rJMSF027H03+ ACATCTGTAGGTAACAATAGACTGACACCCTTGGCTTTAGCCTTCTCAAGGAGTGATGTA
rJMSF002L05+ ACATCTGTAGGTAACAATAGACTGACACCCTTGGCTTTAGCCTTCTCAAGGAGTGATGTA
rJMSF001B18+ ACATCTGTAGGTAACAATAGACTGACACCCTTGGCTTTAGCCTTCTCAAGGAGTGATGTA
rJMSF051O21+ ACATCTGTAGGTAACAATAGACTGACACCCTTGGCTTTAGCCTTCTCAAGGAGTGATGTA
rJMSF009K24+ ACATCTGTAGGTAACAATAGACTGACACCCTTGGCTTTAGCCTTCTCAAGGAGTGATGTA
JMFN012A01- ACATCTGTAGGTAACAATAGACTGACACCCTTGGCTTTAGCCTTCTCAAGGAGTGATGTA
JMFN029O09- ACATCTGTAGGTAACAATAGACTGACACCCTTGGCTTTAGCCTTCTCAAGGAGTGATGTA
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consensus ACATCTGTAGGTAACAATAGACTGACACCCTTGGCTTTAGCCTTCTCAAGGAGTGATGTA

. : . : . : . : . : . :
rJMFF012D07+ GCAAGACCTAGTTTGTCTTCTTCCA
rJMSF008F06+ GCAAGACCTAGTTTGTCTTCTTCCACAAGAGATGATCCCACTGAAAGACCTNGAGC
rJMFF006E14+ GCAAGACCTAGTTTGTCTTCTTCCAC
rJMSF009N03+ GCAAGACCTAGTTTGTCTTCTTCCACAAGAGATGATCCC
rJMSF023M20+ GCAAGACCTAGTTTGTCTTCTTCCACAAGAGATGATCC
rJMSF029C14+ GCAAGACCTAGTTTGTCTTCTTCC
rJMFF028J08+ GCAAGA
rJMSF049D21+ GCAAGACCTAGTTTGTCTTCTTCC
rJMSF043C13+ GCAAGACCTAGTTTGTCTTCTTCCACAAGAGATGATCCCACTGAAAGACCTTGAGCCTTG
rJMSF035H01+ GCAAGACCTAGTTTGTCTTCTTCCACAAGAGATGATCCCACTGAAAGACCTTGAGCCTTG
rJMSF027H03+ GCAAGACCTAGTTTGTCTTCTTCCACAAGAGATGATCCCACTGAAAGACCTTGAGCCTTG
rJMSF002L05+ GCAAGACCTAGTTTGTCTTCTTCCACAAGAGATGATCCCACTGAANGACCTTGAGCCTTG
rJMSF001B18+ GCAAGACCTAGTTTGTCTTCTTCCACAAGAGATGATCCCACTGAAAGACCTTGAGCCTTG
rJMSF051O21+ GCAAGACCTAGTTTGTCTTCTTCCACAAGAGATGATCCCACTGAAAGACCTTGAGCCTTG
rJMSF009K24+ GCAAGACCTAGTTTGTCTTCTTCCACAAGAGATGATCCCACTGAAAGACCTTGAGCCTTG
JMFN012A01- GCAAGACCTA
JMFN029O09- GCAAGACCTAGTTTGTCTTCTTCCACAAGAGATGATCCCACTGAAAGACCTTGAGCCTTG
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consensus GCAAGACCTAGTTTGTCTTCTTCCACAAGAGATGATCCCACTGAAAGACCTTGAGCCTTG

. : . : . : . : . : . :
rJMSF043C13+ TAGAACGTGAAGATCATACCTCCTCCC
rJMSF035H01+ TAGAACGTGAAGATCATACCTCCTCCC
rJMSF027H03+ TAGAACGTGAAGATCATACCTCCTCCC
rJMSF002L05+ TA
rJMSF001B18+ TAGAACGTGAAGATCATACCTCCTCC
rJMSF051O21+ TA
rJMSF009K24+ TAGAACGTGAAGATCATACCTCCTCCCAGAAGCAAGATATCACATTTCTCCAAAGGGACT
JMFN029O09- TAGAACGTGAAGATC
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consensus TAGAACGTGAAGATCATACCTCCTCCCAGAAGCAAGATATCACATTTCTCCAAAGGGACT

. : . : . : . : . : . :
rJMSF009K24+ CANTCACTC
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consensus CANTCACTC