Alignment Contig 10544

                          .    :    .    :    .    :    .    :    .    :    .    :

JMSF002B14+ GAGTCTTCTCCTTACTTCCTTCATTCCCTCTTTTCTATCTATCATCACTCCAAACCCATT
JMSF023D21+ GTCTTCTCCTTACTTCCTTCATTCCCTCTTTTCTATCTATCATCACTCCAAACCCATT
JMFF023M01+ GTCTTCTCCTTACTTCCTTCATTCCCTCTTTTCTATCTATCATCACTCCAAACCCATT
JMSF033I19+ GTCTTCTCCTTACTTCCTTCATTCCCTCTTTTCTATCTATCATCACTCCAAACCCATT
JMFF044B09+ TCTCCTTACTTCCTTCATTCCCTCTTTTCTATCTATCATCACTCCAAACCCATT
____________________________________________________________
consensus GAGTCTTCTCCTTACTTCCTTCATTCCCTCTTTTCTATCTATCATCACTCCAAACCCATT

. : . : . : . : . : . :
JMSF002B14+ CTTTCTACGGCGATTCGATTTCTAAGTCGGGGCAGCTCTAAAATGCTGTCAGATTTTCGT
JMSF023D21+ CTTTCTACGGCGATTCGATTTCTAAGTCGGGGCAGCTCTAAAATGCTGTCAGATTTTCGT
JMFF023M01+ CTTTCTACGGCGATTCGATTTCTAAGTCGGGGCAGCTCTAAAATGCTGTCAGATTTTCGT
JMSF033I19+ CTTTCTACGGCGATTCGATTTCTAAGTCGGGGCAGCTCTAAAATGCTGTCAGATTTTCGT
JMFF044B09+ CTTTCTACGGCGATTCGATTTCTAAGTCGGGGCAGCTCTAAAATGCTGTCAGATTTTCGT
____________________________________________________________
consensus CTTTCTACGGCGATTCGATTTCTAAGTCGGGGCAGCTCTAAAATGCTGTCAGATTTTCGT

. : . : . : . : . : . :
JMSF002B14+ TCCAATTCTCCCTCAGATCATCATCATCTTCAACCCTCGCCAAAACCCAAATCCTCTTAT
JMSF023D21+ TCCAATTCTCCCTCAGATCATCATCATCTTCAACCCTCGCCAAAACCCAAATCCTCTTAT
JMFF023M01+ TCCAATTCTCCCTCAGATCATCATCATCTTCAACCCTCGCCAAAACCCAAATCCTCTTAT
JMSF033I19+ TCCAATTCTCCCTCAGATCATCATCATCTTCAACCCTCGCCAAAACCCAAATCCTCTTAT
JMFF044B09+ TCCAATTCTCCCTCAGATCATCATCATCTTCAACCCTCGCCAAAACCCAAATCCTCTTAT
____________________________________________________________
consensus TCCAATTCTCCCTCAGATCATCATCATCTTCAACCCTCGCCAAAACCCAAATCCTCTTAT

. : . : . : . : . : . :
JMSF002B14+ CACTTCTACAATTCTTTCCAATCCCAAATCGCTGCTCATCCACGATTCTGGCTTCTTTC
JMSF023D21+ CACTTCTACAATTCTTTCCAATCCCAAATCGCTGCTCATCCACGATTCTGGCTTCTTTCC
JMFF023M01+ CACTTCTACAATTCTTTCCAATCCCAAATCGCTGCTCATCCACGATTCTGGCTTCTTTCC
JMSF033I19+ CACTTCTACAATTCTTTCCAATCCCAAATCGCTGCTCATCCACGATTCTGGCTTCTTTCC
JMFF044B09+ CACTTCTACAATTCTTTCCAATCCCAAATCGCTGCTCATCCACGATTCTGGCTTCTTTCC
____________________________________________________________
consensus CACTTCTACAATTCTTTCCAATCCCAAATCGCTGCTCATCCACGATTCTGGCTTCTTTCC

. : . : . : . : . : . :
JMSF023D21+ GCCTTTCTCTTTATCCAGCTTCTTGTCGTTTTCTTTACCCGGAATTCGCCGCTCTCTTTC
JMFF023M01+ GCCTTTCTCTTTATCCAGCTTCTTGTCGTTTTC
JMSF033I19+ GCCTTTCTCTTTATCCAGCTTCTTGTCGTTTTCTTTACCCGGAATTCGCCGCTCTCTTTC
JMFF044B09+ GCCTTTCTCTTTATCCAGCTTCTTGTCGTTTTCTTTACCCGGAATTCGCCGCTCTCTTTC
____________________________________________________________
consensus GCCTTTCTCTTTATCCAGCTTCTTGTCGTTTTCTTTACCCGGAATTCGCCGCTCTCTTTC

. : . : . : . : . : . :
JMSF023D21+ TCCACTCATGCCCAGGTTCCCCCTCAAACGATTACGCTTCCGGCCGCCGCGCGCCGCGGC
JMSF033I19+ TCCACTCATGCCCAGGTTCCCCCTCAAACGATTACGCTTCCGGCCGCCGCGCGCCGCGGC
JMFF044B09+ TCCACTCATGCCCAGGTTCCCCCTCAAACGATTACGCTTCCGGCCGCCGCGCGCCGCGGC
____________________________________________________________
consensus TCCACTCATGCCCAGGTTCCCCCTCAAACGATTACGCTTCCGGCCGCCGCGCGCCGCGGC

. : . : . : . : . : . :
JMSF023D21+ GATGCTGTGGCTCAGCCGCCCAAGGATGGGGGAGGAGGGTGTGAGTTCGGTAGGGTTTAT
JMSF033I19+ GATGCTGTGGCTCAGCCGCCCAAGGATGGGGGAGGAGGGTGTGAGTTCGGTAGGGTTTAT
JMFF044B09+ GATGCTGTGGCTCAGCCGCCCAAGGATGGGGGAGGAGGGTGTGAGTTCGGTAGGGTTTAT
JMFS086H02+ TGAGTTCGGTAGGGTTTAT
____________________________________________________________
consensus GATGCTGTGGCTCAGCCGCCCAAGGATGGGGGAGGAGGGTGTGAGTTCGGTAGGGTTTAT

. : . : . : . : . : . :
JMSF023D21+ GTGTACGATTTGCCGCCGATGTTTAACGAGGATTTGGGTTTGAAGAACTGCACGGATCTG
JMSF033I19+ GTGTACGATTTGCCGCCGATGTTTAACGAGGATTTGGGTTTGAAGAACTGCACGGATCTG
JMFF044B09+ GTGTACGATTTGCCGCCGATGTTTAACGAGGATTTGGGTTTGAAGAACTGCACGGATCTG
JMFS086H02+ GTGTACGATTTGCCGCCGATGTTTAACGAGGATTTGGGTTTGAAGAACTGCACGGATCTG
____________________________________________________________
consensus GTGTACGATTTGCCGCCGATGTTTAACGAGGATTTGGGTTTGAAGAACTGCACGGATCTG

. : . : . : . : . : . :
JMSF023D21+ CACCCTTGGATATGGCATTGCGGGGTGAACACCAACGAGGGGTACGGGATGAGGGCGATG
JMSF033I19+ CACCCTTGGATATGGCATTGCGGGGTGAACACCAACGAGGGGTACGGGATGAGGGCGATG
JMFF044B09+ CACCCTTGGATATGGCATTGCGGGGTGAACACCAACGAGGGGTACGGGATGAGGGCGATG
JMFS086H02+ CACCCTTGGATATGGCATTGCGGGGTGAACACCAACGAGGGGTACGGGATGAGGGCGATG
____________________________________________________________
consensus CACCCTTGGATATGGCATTGCGGGGTGAACACCAACGAGGGGTACGGGATGAGGGCGATG

. : . : . : . : . : . :
JMSF023D21+ GAGATGGCCGGGATCTTGCCGGGGAAACTGGCTAAGGCGTGGTATCGGACGAATCAGTTC
JMSF033I19+ GAGATGGCCGGGATCTTGCCGGGGAAACTGGCTAAGGCGTGGTATCGGACGAATCAGTTC
JMFF044B09+ GAGATGGCCGGGATCTTGCCGGGGAAACTGGCTAAGGCGTGGTATCGGACGAATCAGTTC
JMFS086H02+ GAGATGGCCGGGATCTTGCCGGGGAAACTGGCTAAGGCGTGGTATCGGACGAATCAGTTC
____________________________________________________________
consensus GAGATGGCCGGGATCTTGCCGGGGAAACTGGCTAAGGCGTGGTATCGGACGAATCAGTTC

. : . : . : . : . : . :
JMSF023D21+ TCGTCG
JMSF033I19+ TCGTCGGANGTGATATTTCACCACCGGCTACTGAA
JMFF044B09+ TCGTCGGAGGTGATATTTCACCACCGGCTACTGAA
JMFS086H02+ TCGTCGGAGGTGATATTTCACCACCGGCTACTGAATTACCGGTGCCGGACGATGGAGCCG
____________________________________________________________
consensus TCGTCGGAGGTGATATTTCACCACCGGCTACTGAATTACCGGTGCCGGACGATGGAGCCG

. : . : . : . : . : . :
JMFS086H02+ GAATCGGCGACGGTGTTTTATATTCCGTTCTACGCCGGACAGGCCGTCGGGAAATATTTA
____________________________________________________________
consensus GAATCGGCGACGGTGTTTTATATTCCGTTCTACGCCGGACAGGCCGTCGGGAAATATTTA

. : . : . : . : . : . :
JMFS086H02+ TGGATCGACGATATCGAGAAGCGGGATCGGCTCTGCGATATGATGCTGGAGTGGGTCCAG
____________________________________________________________
consensus TGGATCGACGATATCGAGAAGCGGGATCGGCTCTGCGATATGATGCTGGAGTGGGTCCAG

. : . : . : . : . : . :
JMFS086H02+ AATCAGACGTATTGGAAGAAATCCAACGGCTCAGATCATTTCCTTACCATAGGGCGAATC
____________________________________________________________
consensus AATCAGACGTATTGGAAGAAATCCAACGGCTCAGATCATTTCCTTACCATAGGGCGAATC

. : . : . : . : . : . :
JMFS086H02+ ACATGGGATTTCCGCCGTTTAATGGATGCGGATCAGAAATGGGGCTCCAGCCTCCTCAAC
____________________________________________________________
consensus ACATGGGATTTCCGCCGTTTAATGGATGCGGATCAGAAATGGGGCTCCAGCCTCCTCAAC

. : . : . : . : . : . :
JMFS086H02+ CTCCCGGCGATGGAGAACGTCACGCGCTTCATCATCGAGAGAGCCCCGTGGGACACCTCC
____________________________________________________________
consensus CTCCCGGCGATGGAGAACGTCACGCGCTTCATCATCGAGAGAGCCCCGTGGGACACCTCC

. : . : . : . : . : . :
JMFS086H02+ GACGTCGGCGTCCCGTACCCCACCGGATTCCACCCCAGCTCCGTTTCGCAGCTCCGCCAG
____________________________________________________________
consensus GACGTCGGCGTCCCGTACCCCACCGGATTCCACCCCAGCTCCGTTTCGCAGCTCCGCCAG

. : . : . : . : . : . :
JMFS086H02+ TGGCAGCGCT
____________________________________________________________
consensus TGGCAGCGCT