Alignment Contig 10248

                          .    :    .    :    .    :    .    :    .    :    .    :

JMFF029O18+ ACCACCATCAACACACACTTAATCCAAGCACCTGAGAAGACCAATAAGTGAATATGAATT
JMFF024D24+ GAATGTGAATT
JMFS118F06+ AAGTGAATATGAATT
JMFF036G22+ GAATATGAATT
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consensus ACCACCATCAACACACACTTAATCCAAGCACCTGAGAAGACCAATAAGTGAATATGAATT

. : . : . : . : . : . :
JMFF029O18+ CCACTGCTCCAAACTCAGGCATGGATCGGATGGAAGGGTTTGCGAAAGCATTTGGTGCGG
JMFF024D24+ CCACTGCTCCAAACTCAGGCATGGATCGGATGGAAGGGTTTGCGAAAGCATTTGGTGCGG
JMFS118F06+ CCACTGCTCCAAACTCAGGCATGGATCGGATGGAAGGGTTTGCGAAAGCATTTGGTGCGG
JMFF036G22+ CCACTGCTCCAAACTCAGGCATGGACCGGATGGAAGGGTTTGCGAAAGCATTTGGTGCGG
JMSF032I05+ GCTCCAAACTCAGGCATGGATCGGATGGAAGGGTTTGCGAAAGCATTTGGTGCGG
JMFF015D11+ GATCGGATGGAAGGGTTTGCGAAAGCATTTGGTGCGG
JMFF037F18+ GATCGGATGGAAGGGTTTGCGAAAGCATTTGGTGCGG
JMFS037H10+ GTTTGCGAAAGCATTTGGTGCGG
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consensus CCACTGCTCCAAACTCAGGCATGGATCGGATGGAAGGGTTTGCGAAAGCATTTGGTGCGG

. : . : . : . : . : . :
JMFF029O18+ TTTCAGATGTTGCTTCTACTGCCTGGGCCTATGCAAAGCAGCTTTCGAACTCACCAGTTC
JMFF024D24+ TTTCAGATGTTGCTTCTACTGCCTGGGCCTATGCAAAGCAGCTTTCGAACTCACCAGTTC
JMFS118F06+ TTTCAGATGTTGCTTCTACTGCCTGGGCCTATGCAAAGCAGCTTTCGAACTCACCAGTTC
JMFF036G22+ TTTCAGATGTTGCTTCTACTGCCTGGGCCTATGCAAAGCAGCTTTCGAACTCACCAGTTC
JMSF032I05+ TTTCAGATGTTGCTTCTACTGCCTGGGCCTATGCAAAGCAGCTTTCGAACTCACCAGTTC
JMFF015D11+ TTTCAGATGTTGCTTCTACTGCCTGGGCCTATGCAAAGCAGCTTTCGAACTCACCAGTTC
JMFF037F18+ TTTCAGATGTTGCTTCTACTGCCTGGGCCTATGCAAAGCAGCTTTCGAACTCACCAGTTC
JMFS037H10+ TTTCAGATGTTGCTTCTACTGCCTGGGCCTATGCAAAGCAGCTTTCGAACTCACCAGTTC
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consensus TTTCAGATGTTGCTTCTACTGCCTGGGCCTATGCAAAGCAGCTTTCGAACTCACCAGTTC

. : . : . : . : . : . :
JMFF029O18+ TTCAACCAAAACTCAACATCTTAGGAGTCCAGACTTCCCAAACCACAGATCTTCAAGGAT
JMFF024D24+ TTCAACCAAAACTCAACATCTTAGGAGTCCAGACTTCCCAAACCACAGATCTTCAAGGAT
JMFS118F06+ TTCAACCAAAACTCAACATCTTAGGAGTCCAGACTTCCCAAACCACAGATCTTCAAGGAT
JMFF036G22+ TTCAACCAAAACTCAACATCTTAGGAGTCCAGACTTCCCAAACCACAGATCTTCAAGGAT
JMSF032I05+ TTCAACCAAAACTCAACATCTTAGGAGTCCAGACTTCCCAAACCACAGATCTTCAAGGAT
JMFF015D11+ TTCAACCAAAACTCAACATCTTAGGAGTCCAGACTTCCCAAACCACAGATCTTCAAGGAT
JMFF037F18+ TTCAACCAAAACTCAACATCTTAGGAGTCCAGACTTCCCAAACCACAGATCTTCAAGGAT
JMFS037H10+ TTCAACCAAAACTCAACATCTTAGGAGTCCAGACTTCCCAAACCACAGATCTTCAAGGAT
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consensus TTCAACCAAAACTCAACATCTTAGGAGTCCAGACTTCCCAAACCACAGATCTTCAAGGAT

. : . : . : . : . : . :
JMFF029O18+ CTTCCTTGACGCCATTAGAAGATAGCCTCAACGGGATGTTTACTGGCATGATCAGGAGTG
JMFF024D24+ CTTCCTTGACGCCATTAGAAGATAGCCTCAACGGGATGTTTACTGGCATGATCAGGAGTG
JMFS118F06+ CTTCCTTGACGCCATTAGAAGATAGCCTCAACGGGATGTTTACTGGCATGATCAGGAGTG
JMFF036G22+ CTTCCTTGACGCCATTAGAAGATAGCCTCAACGGGATGTTTACTGGCATGATCAGGAGTG
JMSF032I05+ CTTCCTTGACGCCATTAGAAGATAGCCTCAACGGGATGTTTACTGGCATGATCAGGAGTG
JMFF015D11+ CTTCCTTGACGCCATTAGAAGATAGCCTCAACGGGATGTTTACTGGCATGATCAGGAGTG
JMFF037F18+ CTTCCTTGACGCCATTAGAAGATAGCCTCAACGGGATGTTTACTGGCATGATCAGGAGTG
JMFS037H10+ CTTCCTTGACGCCATTAGAAGATAGCCTCAACGGGATGTTTACTGGCATGATCAGGAGTG
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consensus CTTCCTTGACGCCATTAGAAGATAGCCTCAACGGGATGTTTACTGGCATGATCAGGAGTG

. : . : . : . : . : . :
JMFF029O18+ GTGAAATGATTGTGGAAATGTGGATGAAATATGATGGCAAAGATGTTGAGGTCTTTCAAC
JMFF024D24+ GTGAAATGATTGTGGAAATGTGGATGAAATATGATGGCAAAGATGTTGAGGTCTTTCAAC
JMFS118F06+ GTGAAATGATTGTGGAAATGTGGATGAAATATGATGGCAAAGATGTTGAGGTCTTTCAAC
JMFF036G22+ GTGAAATGATTTTGGAAATGTGGATGAAATATGATGGCAAAGATGTTGAGGTCTTTCAAC
JMSF032I05+ GTGAAATGATTGTGGAAATGTGGATGAAATATGATGGCAAAGATGTTGAGGTCTTTCAAC
JMFF015D11+ GTGAAATGATTGTGGAAATGTGGATGAAATATGATGGCAAAGATGTTGAGGTCTTTCAAC
JMFF037F18+ GTGAAATGATTGTGGAAATGTGGATGAAATATGATGGCAAAGATGTTGAGGTCTTTCAAC
JMFS037H10+ GTGAAATGATTGTGGAAATGTGGATGAAATATGATGGCAAAGATGTTGAGGTCTTTCAAC
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consensus GTGAAATGATTGTGGAAATGTGGATGAAATATGATGGCAAAGATGTTGAGGTCTTTCAAC

. : . : . : . : . : . :
JMFF029O18+ ACTTCACCCTTATTGCTTCAGAACTCATTTCCAAGGCATCTTTGGGAAGCAACTGCTTGG
JMFF024D24+ ACTTCACCCTTATTGCTTCAGAACTCATTTCCAAGGCATCTTTGGGAAGCAACTGCTTGG
JMFS118F06+ ACTTCACCCTTATTGCTTCAGAACTCATTTCCAAGGCATCTTTGGGAAGCAACTGCTTGG
JMFF036G22+ ACTTCACCCTTATTGCTTCAGAACTCATTTCCAAGGCATCTTTGGGAAGCAACTGCTTGG
JMSF032I05+ ACTTCACCCTTATTGCTTCAGAACTCATTTCCAAGGCATCTTTGGGAAGCAACTGCTTGG
JMFF015D11+ ACTTCACCCTTATTGCTTCAGAACTCATTTCCAAGGCATCTTTGGGAAGCAACTGCTTGG
JMFF037F18+ ACTTCACCCTTATTGCTTCAGAACTCATTTCCAAGGCATCTTTGGGAAGCAACTGCTTGG
JMFS037H10+ ACTTCACCCTTATTGCTTCAGAACTCATTTCCAAGGCATCTTTGGGAAGCAACTGCTTGG
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consensus ACTTCACCCTTATTGCTTCAGAACTCATTTCCAAGGCATCTTTGGGAAGCAACTGCTTGG

. : . : . : . : . : . :
JMFF029O18+ AAGCCAAGAACATATTTCCTGGCACTGGTGGGATTGTGAAAAAGAATGGTGACATGGATT
JMFF024D24+ AAGCCAAGAACATATTTCCTGGCACTGGTGGGATTGTGAAAAAGAATGGTGACATGG
JMFS118F06+ AAGCCAAGAACATATTTCCTGGCACTGGTGGGATTGTGAAAAAGAATGGTGACATGGATT
JMFF036G22+ AAGCCAAGAACATATTTCCTGGCACTGGTGGGATTGTGAAAAAGAATGGTGACATGGATT
JMSF032I05+ AAGCCAAGAACATATTTCCTGGCACTGGTGGGATTGTGAAAAAGAATGGTGACATGGATT
JMFF015D11+ AAGCCAAGAACATATTTCCTGGCACTGGTGGGATTGTGAAAAAGAATGGTGACATGGATT
JMFF037F18+ AAGCCAAGAACATATTTCCTGGCACTGGTGGGATTGTGAAAAAGAATGGTGACATGGATT
JMFS037H10+ AAGCCAAGAACATATTTCCTGGCACTGGTGGGATTGTGAAAAAGAATGGTGACATGGATT
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consensus AAGCCAAGAACATATTTCCTGGCACTGGTGGGATTGTGAAAAAGAATGGTGACATGGATT

. : . : . : . : . : . :
JMFF029O18+ CCGAGAAACTGTTAGTGGCCAATCAAGAAAGCAAAAATAGCAGCAAGATTTC
JMFS118F06+ CCGAGAAACTGTTAGTGGCCAATCAAGAAAGCAAAAATAGCAGCAAGATTTCGATTGAAG
JMFF036G22+ CCGAGAAACTGTTAGTGGCCAATCAAGAAAGCAAAAATAGCAGCAAGATTTCGATTGAAG
JMSF032I05+ CCGAGAAACTGTTAGTGGCCAATCAAGAAAGCAAAAATAGCAGCAAGATTTCGATTGAAG
JMFF015D11+ CCGAGAAACTGTTAGTGGCCAATCAAGAAAGCAAAAATAGCAGCAAGATTTCGATTGAAG
JMFF037F18+ CCGAGAAACTGTTAGTGGCCAATCAAGAAAGCAAAAATAGCAGCAAGATTTCGATTGAAG
JMFS037H10+ CCGAGAAACTGTTAGTGGCCAATCAAGAAAGCAAAAATAGCAGCAAGATTTCGATTGAAG
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consensus CCGAGAAACTGTTAGTGGCCAATCAAGAAAGCAAAAATAGCAGCAAGATTTCGATTGAAG

. : . : . : . : . : . :
JMFS118F06+ AGGTTGCGGATGAGTGCAAGGCGTTCTGTTACGTGGGGCGTGTTGCGACAACATCTCTCC
JMFF036G22+ AGGTTGCGGATGAGTGCAAGGCGTTCTGTTACGTGGGGCGTGTTGCGACAACATCTCTCC
JMSF032I05+ AGGTTGCGGATGAGTGCAAGGCGTTCTGTTACGTGGGGCGTGTTGCGACAACATCTCTCC
JMFF015D11+ AGGTTGCGGATGAGTGCAAGGCGTTCTGTTACGTGGGGCGTGTTGCGACAACATCTCTCC
JMFF037F18+ AGGTTGCGGATGAGTGCAAGGCGTTCTGTTACGTGGGGCGTGTTGCGACAACATCTCTCC
JMFS037H10+ AGGTTGCGGATGAGTGCAAGGCGTTCTGTTACGTGGGGCGTGTTGCGACAACATCTCTCC
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consensus AGGTTGCGGATGAGTGCAAGGCGTTCTGTTACGTGGGGCGTGTTGCGACAACATCTCTCC

. : . : . : . : . : . :
JMFS118F06+ TGGG-ATGGGCAGTCCATAAGCTATCTAG
JMFF036G22+ TGGGGATGGGCAGTCCATAAGCTATCTA
JMSF032I05+ TGGG-ATGGGCAGTCCATAAGCTATCTAGAGACAAGAATTTGCAGGAAAGAGCAAGGAAA
JMFF015D11+ TGG
JMFF037F18+ TGGG-ATGGGCAGTCCATAAGCTATCTAG
JMFS037H10+ TGGG-ATGGGCAGTCCATAAGCTATCTAGAGACAAGAATTTGCAGGAAAGAGCAAGGAAA
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consensus TGGG-ATGGGCAGTCCATAAGCTATCTAGAGACAAGAATTTGCAGGAAAGAGCAAGGAAA

. : . : . : . : . : . :
JMSF032I05+ GAAGTGATTCAAATGTTTGGCAGCGAAAACCCCAATCCAGATGGCATTGCAAGACTGAAA
JMFS037H10+ GAAGTGATTCAAATGTTTGGCAGCGAAAACCCCAATCCA
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consensus GAAGTGATTCAAATGTTTGGCAGCGAAAACCCCAATCCAGATGGCATTGCAAGACTGAAA

. : . : . : . : . : . :
JMSF032I05+ ATTGTGGATGA
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consensus ATTGTGGATGA