Previous Contig 013761:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF018O06Sequence482005783 (3)gb:MFL297739_16860327e-23Malus floribunda hcrVf1 gene.749013761 (3)pir|S49300|S493001e-27AWJL236 protein - wheat>gb:TAAWJL236_1724224 T.aestivumn (subclone pAWJL236) AWJ
JMSF029C12Sequence663005783 (3)gb:MFL297741_16860345e-38Malus floribunda hcrVf3 gene.669013761 (3)pir|S49300|S493002e-25AWJL236 protein - wheat>gb:TAAWJL236_1724224 T.aestivumn (subclone pAWJL236) AWJ
JMSF048D01Sequence743005783 (3)gb:MFL297739_16860323e-47Malus floribunda hcrVf1 gene.750013761 (3)gb:AF215729_17779471e-24Glycine max RFLP clone A 45-10 sequence; and unknown gene.

Alignment

This contig is upended


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rJMSF018O06+ CATCATCGGTAGCATTCCGA
                      ____________________________________________________________
consensus CATCATCGGTAGCATTCCGA
 
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rJMSF029C12+ TCTTAACAATCTCACGTCAATGGTCGAGCAGAATGAGATTGATTTTGGAGAAATGG
rJMSF018O06+ GGTGTCTTAACAATCTCACGTCAATGGTTGAGCAGAATGAGATTGATTTTGGAGAAATGG
                      ____________________________________________________________
consensus GGTGTCTTAACAATCTCACGTCAATGGTTGAGCAGAATGAGATTGATTTTGGAGAAATGG
 
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rJMSF029C12+ ATACTTTAACAAAAATATTCTTGGGAGAAAGTGCTACAGTGATCACTAAAGGGCAAGAGT
rJMSF018O06+ ATACTTTAACAAAAATATTCTTGGGAGAAAGTGCTACAGTGATCACTAAAGGGCAAGAGT
                      ____________________________________________________________
consensus ATACTTTAACAAAAATATTCTTGGGAGAAAGTGCTACAGTGATCACTAAAGGGCAAGAGT
 
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rJMSF029C12+ ACCAATACTCTACCATTATATTGGTGTTGTTTGCAAGTTTTGATCTTTCAAACAACAATT
rJMSF018O06+ ACCAATACTCTACCATTATATTGGTGTTGTTTGCAAGTTTTGATCTTTCAAACAACAATT
rJMSF048D01+ CAAGTTTTGATCTTTCCNACAACCATT
                      ____________________________________________________________
consensus ACCAATACTCTACCATTATATTGGTGTTGTTTGCAAGTTTTGATCTTTCAAACAACAATT
 
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rJMSF029C12+ TTTCTGGGGAAATACCTGTGGAGCTGACCACTTTACTGGAATTAAGATCCTTGAACTTAT
rJMSF018O06+ TTTCTGGGGAAATACCTGTGGAGCTGACCACTTTACTGGAATTAAGATCCTTGAACTTAT
rJMSF048D01+ TTTCTGGGGAAATACCTGTGGAACTTACCACTTTAGTGGAATTAAGATTCTTGAACTTAT
                      ____________________________________________________________
consensus TTTCTGGGGAAATACCTGTGGAGCTGACCACTTTACTGGAATTAAGATCCTTGAACTTAT
 
. : . : . : . : . : . :
rJMSF029C12+ CAAGAAATAAGTTGACAGGAAACATTCCCAAGGAAATAGGAAACATGAAGCAATTAGAAT
rJMSF018O06+ CAAGAAATAAGTTGACAGGAAACATTCCCAAGGAAATAGGAAACATGAAGCAATTAGAAT
rJMSF048D01+ CAGGAAATAAGTTGACAGGAAACATTCCTAAGAATATAGGAGACATGAAGCAATTAGAAT
                      ____________________________________________________________
consensus CAAGAAATAAGTTGACAGGAAACATTCCCAAGGAAATAGGAAACATGAAGCAATTAGAAT
 
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rJMSF029C12+ CCATTGATCTATCAAGAAACCATCTTTCTGGAGAAATTCCCTACAGTCTCTCAAATCTCA
rJMSF018O06+ CCATTGATCTATCAAGAAACCATCTTTCTGGAGAAATTCCCTACAGTCTCTCAAATCTCA
rJMSF048D01+ CCATTGATCTATCAAGAAATCATCTTTCTGGAGAAATCCCCTACAGCTTCTCAAATCTAA
                      ____________________________________________________________
consensus CCATTGATCTATCAAGAAACCATCTTTCTGGAGAAATTCCCTACAGTCTCTCAAATCTCA
 
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rJMSF029C12+ ACTTTCTGAGTTACTTGAATTTGTCTTATAACAATCTGTCTGGGAAGATCCCTACTGGTA
rJMSF018O06+ ACTTTCTGAGTTACTTGAATTTGTCTTATAACAATCTGTCTGGGAAGATCCCTACTGGTA
rJMSF048D01+ ACTTTCTGAGTTACTTGAATTTGTCTTATAACAATCTGTCTGGGAAGATCCCTACTGGTA
                      ____________________________________________________________
consensus ACTTTCTGAGTTACTTGAATTTGTCTTATAACAATCTGTCTGGGAAGATCCCTACTGGTA
 
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rJMSF029C12+ CTCAACTTCAAAGCTTCAATGCATCTTGTTATGTTGGTAACAATCTTTGTGGGCCTCCTC
rJMSF018O06+ CTCAACTTCAAAGCTTCAATGCATCTTGTTATGTTGGTAACAATCTTTGTGGGCCTCCTC
rJMSF048D01+ CTCAGCTTCAAAGCTTCAATGCATCTTGTTATGTTGGTAACAATCTTTGTGGGCCTCCTC
                      ____________________________________________________________
consensus CTCAACTTCAAAGCTTCAATGCATCTTGTTATGTTGGTAACAATCTTTGTGGGCCTCCTC
 
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rJMSF029C12+ TCCTTGGATGTAGCA------------ATGATGATGATGTTCCTGATGAAGAAGAAGACA
rJMSF018O06+ TCCTTGGATGTAGCA------------ATGATGATGATGTTCCTGATGAAGAAGAAGACA
rJMSF048D01+ TCTTTGAATGTAGCAATGAATCCAATGATGATGATGCTGTTCCTGATGAAGAAGAAGACA
                      ____________________________________________________________
consensus TCCTTGGATGTAGCA------------ATGATGATGATGTTCCTGATGAAGAAGAAGACA
 
. : . : . : . : . : . :
rJMSF029C12+ GAGGAGATGATT---TTGAGGCAAAGTGGTTTTATATTAGCATGGCTATAGGATTTGTTG
rJMSF018O06+ GAGGAGATGATT---TTGAGGCAAAGTGGTTTTATATTAGCATGGCTATAGGATTTGTTG
rJMSF048D01+ GAGGAGATGATTCTGATGAGGCAAAGTGGTTTTATATTAGCATGGCTATAGGATTTGTTG
                      ____________________________________________________________
consensus GAGGAGATGATT---TTGAGGCAAAGTGGTTTTATATTAGCATGGCTATAGGATTTGTTG
 
. : . : . : . : . : . :
rJMSF029C12+ TGGGATGGTGGGGCATCTGGGGACCTTTGTTTGTTGTGAAATCTTGGAG
rJMSF018O06+ TGGGATGGTGGGGCATCTGGGGACCTTTGTTTGTTGTGAAATCTTGGAG
rJMSF048D01+ TGGGATGGTGGGGCATCTGGGGACCTTTGTTTGTTGTGAAATCTTGGAGACAAGCCTATT
                      ____________________________________________________________
consensus TGGGATGGTGGGGCATCTGGGGACCTTTGTTTGTTGTGAAATCTTGGAGACAAGCCTATT
 
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rJMSF048D01+ TTCAATTTTTAGATGTTAAGTTGAAGTATCTTTTTGGGTGGTTTGGACTGGGATGGATAT
                      ____________________________________________________________
consensus TTCAATTTTTAGATGTTAAGTTGAAGTATCTTTTTGGGTGGTTTGGACTGGGATGGATAT
 
. : . : . : . : . : . :
rJMSF048D01+ TACTTCCGAACAAAAGGCACCGTTCTGATAATTCTCGTGACAACCGACCAGAGGAGGCAA
                      ____________________________________________________________
consensus TACTTCCGAACAAAAGGCACCGTTCTGATAATTCTCGTGACAACCGACCAGAGGAGGCAA
 
. : . : . : . : . : . :
rJMSF048D01+ GCGGGACGCGAGTGAGGATTCATCAAATGCAAGACCGACTGGGCCCCCAAGTCTAGAGTT
                      ____________________________________________________________
consensus GCGGGACGCGAGTGAGGATTCATCAAATGCAAGACCGACTGGGCCCCCAAGTCTAGAGTT
 
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rJMSF048D01+ GGATTCTCACGGTATATTTGTACTTTTTTGAACTCTTTTCTTGTATTATTTGAAAAATAT
                      ____________________________________________________________
consensus GGATTCTCACGGTATATTTGTACTTTTTTGAACTCTTTTCTTGTATTATTTGAAAAATAT