Previous Contig 013674:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF015I12Sequence522007742 (3)pir|D86221|D862214e-37hypothetical protein [imported] - Arabidopsis thaliana>gb:AE005172_889899 Arabid724013674 (2)pir|D86221|D862211e-69hypothetical protein [imported] - Arabidopsis thaliana>gb:AE005172_889899 Arabid
JMSF046M06Sequence501007742 (3)pir|D86221|D862212e-26hypothetical protein [imported] - Arabidopsis thaliana>gb:AE005172_889899 Arabid654013674 (2)pir|D86221|D862212e-63hypothetical protein [imported] - Arabidopsis thaliana>gb:AE005172_889899 Arabid

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF015I12+ CTTTTGTAC
                      ____________________________________________________________
consensus CTTTTGTAC
 
. : . : . : . : . : . :
rJMSF015I12+ TCATGCAGATCGTTTATGTCCTTGAATCATCCAGTTGCGTTTCTTCTCTCAAACACCCAT
                      ____________________________________________________________
consensus TCATGCAGATCGTTTATGTCCTTGAATCATCCAGTTGCGTTTCTTCTCTCAAACACCCAT
 
. : . : . : . : . : . :
rJMSF015I12+ TTTCCTCTTTGGTTTGTAGTACTATGTGGGAGCTCCTCTCTAGCACTTCTTCATTACATC
rJMSF046M06+ TCTTTGGTTTGTAGTACTATGTGGGAGCTCCTCTCTAGCACTTCTTCATTACATC
                      ____________________________________________________________
consensus TTTCCTCTTTGGTTTGTAGTACTATGTGGGAGCTCCTCTCTAGCACTTCTTCATTACATC
 
. : . : . : . : . : . :
rJMSF015I12+ GTTGAAAAGGAGCCTCCGAAATCCGAGCAAATGCCTTCAATCCTTGCCGCATTCATAATG
rJMSF046M06+ GTTGAAAAGGAGCCTCCGAAATCCGAGCAAATGCCTTCAATCCTTGCCGCATTCATAATG
                      ____________________________________________________________
consensus GTTGAAAAGGAGCCTCCGAAATCCGAGCAAATGCCTTCAATCCTTGCCGCATTCATAATG
 
. : . : . : . : . : . :
rJMSF015I12+ AGTGTGTTCTGGATATCAACTGCAGCGGGAGAGCTACTCAACTGCCTTGCAGTTCTTGGA
rJMSF046M06+ AGTGTGTTCTGGATATCAACTGCAGCGGGAGAGCTACTCAACTGCCTTGCAGTTCTTGGA
                      ____________________________________________________________
consensus AGTGTGTTCTGGATATCAACTGCAGCGGGAGAGCTACTCAACTGCCTTGCAGTTCTTGGA
 
. : . : . : . : . : . :
rJMSF015I12+ GTGCTTCTGAAACTCCCCTCTGCTCTTCTCGGTTTGACAGTGCTCGCATGGGGAAAATTC
rJMSF046M06+ GTGCTTCTGAAACTCCCCTCTGCTCTTCTCGGTTTGACAGTGCTCGCATGGGG-AAATTC
                      ____________________________________________________________
consensus GTGCTTCTGAAACTCCCCTCTGCTCTTCTCGGTTTGACAGTGCTCGCATGGGGAAAATTC
 
. : . : . : . : . : . :
rJMSF015I12+ AGTAGGTGATCTCGTTGCAGATGTTGCCGTTGCAAAGGCAGGTCAGCCCGCCTTGGCCAT
rJMSF046M06+ AGTAGGTGATCTCGTTGCAGATGTTGCCGTTGCAAAGGCAGGTCAGCCCGCCTTGGCCAT
                      ____________________________________________________________
consensus AGTAGGTGATCTCGTTGCAGATGTTGCCGTTGCAAAGGCAGGTCAGCCCGCCTTGGCCAT
 
. : . : . : . : . : . :
rJMSF015I12+ GGCCGGGTGCTTTGCCGGCCCCATGTTCAACATGCTTTTCGGGCTGGGAACGGCTCTGGT
rJMSF046M06+ GGCCGGGTGCTTTGCCGGCCCCATGTTCAACATGCTTTTCGGGCTGGGAACGGCTCTGGT
                      ____________________________________________________________
consensus GGCCGGGTGCTTTGCCGGCCCCATGTTCAACATGCTTTTCGGGCTGGGAACGGCTCTGGT
 
. : . : . : . : . : . :
rJMSF015I12+ CATACAAACGGGGGACGTTTATCCAGAGGCCTACGAGCTTCATTTCCATGTGAGCATAGT
rJMSF046M06+ CATACAAACGGGGGACGTTTATCCAGAGGCCTACGAGCTTCATTTCCATGTGAGCATAGT
                      ____________________________________________________________
consensus CATACAAACGGGGGACGTTTATCCAGAGGCCTACGAGCTTCATTTCCATGTGAGCATAGT
 
. : . : . : . : . : . :
rJMSF015I12+ TGTGGCATTCGTTTTCTTGCTCGTTAGCTTGATGGGATCCTTACTTGTAGTAACTTGGCA
rJMSF046M06+ TGTGGCATTCGTTTTCTTGCTCGTTAGCTTGATGGGATCCTTACTTGTAGTAACTTGGCA
                      ____________________________________________________________
consensus TGTGGCATTCGTTTTCTTGCTCGTTAGCTTGATGGGATCCTTACTTGTAGTAACTTGGCA
 
. : . : . : . : . : . :
rJMSF015I12+ CAGGTTTCAAGTCCCCAGATTCTGGGGATTCTGCCTTGTTGGACTTTACTCCTTGTTCAT
rJMSF046M06+ CAGGTTTCAAGTCCCCAGATTCTGGGGATTCTGCCTTGTTGGACTTTACTCCTTGTTCAT
                      ____________________________________________________________
consensus CAGGTTTCAAGTCCCCAGATTCTGGGGATTCTGCCTTGTTGGACTTTACTCCTTGTTCAT
 
. : . : . : . : . : . :
rJMSF015I12+ GTTAGTGAGCCTGGTAATTGCAAAGTTTTCTGCATAATGTTTAGGCAGAGGGAACTTGAT
rJMSF046M06+ GTTAGTGAGCCTGGTAATTGCAAAGTTTTCTGCATAATGTTTAGGCAGAGGGAACTTGAT
                      ____________________________________________________________
consensus GTTAGTGAGCCTGGTAATTGCAAAGTTTTCTGCATAATGTTTAGGCAGAGGGAACTTGAT
 
. : . : . : . : . : . :
rJMSF015I12+ GTCATGGCAGTTGCATTATCATACATTCTTTTAGCACATTTTTATTGTAAATAT
rJMSF046M06+ GTCATGGCAGTTGCATTATCATACATTCTTTTAGCACATTTTTATTGTAAATATTCTAAG
                      ____________________________________________________________
consensus GTCATGGCAGTTGCATTATCATACATTCTTTTAGCACATTTTTATTGTAAATATTCTAAG