Previous Contig 013329:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF012P04+                                                                   ATC
                      ____________________________________________________________
consensus                                                                      ATC
 
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rJMFF012P04+          TTGCACCAGAATATGCATATACAACGAGAGTGAACGAGAAGATTGATATCTATAGCTTCG
                      ____________________________________________________________
consensus             TTGCACCAGAATATGCATATACAACGAGAGTGAACGAGAAGATTGATATCTATAGCTTCG
 
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rJMFF036L20+                                        GGGAGCCAAACTTCGGGGAGGAGCACACGA
rJMFF012P04+          GGGTGGTGCTGCTGGAGCTCGTGACAGGGAGGGAGCCAAACTTCGGGGAGGAGCACACGA
                      ____________________________________________________________
consensus             GGGTGGTGCTGCTGGAGCTCGTGACAGGGAGGGAGCCAAACTTCGGGGAGGAGCACACGA
 
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rJMFF036L20+          GCCTCGCAGAATGGGCGTGGAAGAACTATGCAGAAGCGAGCAACATCGATGAAATGTTGG
rJMFF012P04+          GCCTCGCAGAATGGGCGTGGAAGAACTATGCAGAAGCGAGCAACATCGATGAAATGTTGG
                      ____________________________________________________________
consensus             GCCTCGCAGAATGGGCGTGGAAGAACTATGCAGAAGCGAGCAACATCGATGAAATGTTGG
 
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rJMFF036L20+          ACGGGGAGATCAAGAAAGCGGGGTTCTTGGACGAGATGAGGACGGTGTTCACTCTCGGGC
rJMFF012P04+          ACGGGGAGATCAAGAAAGCGGGGTTCTTGGACGAGATGAGGACGGTGTTCACTCTCGGGC
                      ____________________________________________________________
consensus             ACGGGGAGATCAAGAAAGCGGGGTTCTTGGACGAGATGAGGACGGTGTTCACTCTCGGGC
 
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rJMFF036L20+          TCATATGCACCAGTGCATCGCCTTCCAGCAGGCCGTCCATGAAAGAAGTCGTGCAGATTC
rJMFF012P04+          TCATATGCACCAGTGCATCGCCTTCCAGCAGGCCGTCCATGAAAGAAGTCGTGCAGATTC
rJMSF041C03+              ATGCACCAGTGCATCGCCTTCCAGCAGGCCGTCCATGAAAGAAGTCGTGCAGATTC
                      ____________________________________________________________
consensus             TCATATGCACCAGTGCATCGCCTTCCAGCAGGCCGTCCATGAAAGAAGTCGTGCAGATTC
 
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rJMFF036L20+          TGCAGAGCTGCAGACCTCTGGATGAGTTCGAGAGGAAGATGTCCGGGAAAAACTGCGATG
rJMFF012P04+          TGCAGAGCTGCAGACCTCTGGATGAGTTCGAGAGGAAGATGTCCGGGAAAAACTGCGATG
rJMSF041C03+          TGCAGAGCTGCAGACCTCTGGATGAGTTCGAGAGGAAGATGTCCGGGAAAAACTGCGATG
                      ____________________________________________________________
consensus             TGCAGAGCTGCAGACCTCTGGATGAGTTCGAGAGGAAGATGTCCGGGAAAAACTGCGATG
 
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rJMFF036L20+          TGGCGCCCCTCCTAGCTCGCAACGACGACAAGTATGTGGCGAGCTATAAACGTAGCTCGA
rJMFF012P04+          TGGCGCCCCTCCTAGCTCGCAACGACGACAAGTATGTGGCGAGCTATAAACGTAGCTCGA
rJMSF041C03+          TGGCGCCCCTCCTAGCTCGCAACGACGACAAGTATGTGGCGAGCTATAAACGTAGCTCGA
                      ____________________________________________________________
consensus             TGGCGCCCCTCCTAGCTCGCAACGACGACAAGTATGTGGCGAGCTATAAACGTAGCTCGA
 
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rJMFF036L20+          GGAAGATTGCTGATGAAAGTGATGATGATAATCTGATGTTCAGTGTGTAACAAACACTGA
rJMFF012P04+          GGAAGATTGCTGATGAAAGTGATGATGATAATCTGATGTTCAGTGTGTAACAAACACTGA
rJMSF041C03+          GGAAGATTGCTGATGAAAGTGATGATGATAATCTGATGTTCAGTGTGTAACAAACACTGA
                      ____________________________________________________________
consensus             GGAAGATTGCTGATGAAAGTGATGATGATAATCTGATGTTCAGTGTGTAACAAACACTGA
 
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rJMFF036L20+          GGTGATTTGGATTGTAATGAAATCATAACACAAGTAGTATTAGAGCAACCACATTAGTGG
rJMFF012P04+          GGTGATTTGGATTGTAATGAAATCATAACACAAGTAGTATTAGAGCAACCACATTAGTGG
rJMSF041C03+          GGTGATTTGGATTGTAATGAAATCATAACACAAGTAGTATTAGAGCAACCACATTAGTGG
                      ____________________________________________________________
consensus             GGTGATTTGGATTGTAATGAAATCATAACACAAGTAGTATTAGAGCAACCACATTAGTGG
 
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rJMFF036L20+          TTTTTGCTCGGTTTTCAAGTTAAAAAGTGTTAAATTAATAGCAGTACGTGTAGCATATAG
rJMFF012P04+          TTTTTGCTCGGTTTTCAAGTTAAAAAGTGTTAAATTAATAGCAGTACGTGTAGCATATAG
rJMSF041C03+          TTTTTGCTCGGTTTTCAAGTTAAAAAGNGTTAAATTAATAGCAGTACGTGTAGCATATAG
                      ____________________________________________________________
consensus             TTTTTGCTCGGTTTTCAAGTTAAAAAGTGTTAAATTAATAGCAGTACGTGTAGCATATAG
 
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rJMFF036L20+          TTGTAGTTTTGTGTGTCTTAGGTTGTAGAATTGTTTGTGTAACATAAACATTCGTACTAG
rJMFF012P04+          TTGTAGTTTTGTGTGTCTTAGGTTGTAGAATTGTTTGTGTAACATAAACATTCGTACTAG
rJMSF041C03+          TTGTAGTTTTGTGTGTCTTAGGTTGTAGAATTGTTTGTNTAACATAAACATTCGTACTAG
                      ____________________________________________________________
consensus             TTGTAGTTTTGTGTGTCTTAGGTTGTAGAATTGTTTGTGTAACATAAACATTCGTACTAG
 
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rJMFF036L20+          CTAGCNGTTCAGAGTCCCCGGTCGGATGAACTGTAAGGTTCACCCTTTCAGG        
rJMFF012P04+          CTAGCTGTTCAGAGTCCCCGGTCGGATGAACTGTAAGGTTCACCCTTTCAGGGCCAGTAA
rJMSF041C03+          CTANCTGTTCAGAGTCCCCGGTCGGATGAACTGTAAGGTTCACCCTTTCAGGGCCAGTAA
                      ____________________________________________________________
consensus             CTAGCTGTTCAGAGTCCCCGGTCGGATGAACTGTAAGGTTCACCCTTTCAGGGCCAGTAA
 
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rJMFF012P04+          G                                                           
rJMSF041C03+          GTATACTTTGNNGGCCTTGGCCCTTGGGTGTGTGGTTTAAGAATTACGTTATCATAGGAG
                      ____________________________________________________________
consensus             GTATACTTTGNNGGCCTTGGCCCTTGGGTGTGTGGTTTAAGAATTACGTTATCATAGGAG