Previous Contig 013132:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF025A21Sequence535006266 (3)gb:AB061795_15220882e-04Bruguiera gymnorhiza bg55 mRNA, complete cds.728013132 (2)gb:AB061795_15220885e-29Bruguiera gymnorhiza bg55 mRNA, complete cds.
JMSF037P05Sequence650006266 (3)gb:AB061795_15220884e-32Bruguiera gymnorhiza bg55 mRNA, complete cds.666013132 (2)gb:AB061795_15220889e-30Bruguiera gymnorhiza bg55 mRNA, complete cds.

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF025A21+ ATCTTAGAGGTGCGAGATTCAGCTTAGAACCGTCAGAAGAGGA
                      ____________________________________________________________
consensus ATCTTAGAGGTGCGAGATTCAGCTTAGAACCGTCAGAAGAGGA
 
. : . : . : . : . : . :
rJMSF025A21+ AGCGGCTAAGGTTGTGAAAGAATTACTTTTTCAGTGCACGAAGAGCGAGCTGGAGTCTGT
                      ____________________________________________________________
consensus AGCGGCTAAGGTTGTGAAAGAATTACTTTTTCAGTGCACGAAGAGCGAGCTGGAGTCTGT
 
. : . : . : . : . : . :
rJMSF025A21+ TCAGGTTGCGATGTGGAGGCTAAACATTACCTCGCCAAACGCACTCTTGATGGAGAAACG
rJMSF037P05+ AGAAACG
                      ____________________________________________________________
consensus TCAGGTTGCGATGTGGAGGCTAAACATTACCTCGCCAAACGCACTCTTGATGGAGAAACG
 
. : . : . : . : . : . :
rJMSF025A21+ GTGCATC-AAACGCTGCTGGACAACGTTGGTGAAGGCGACGGTCAAAAGAAGAAGATTCT
rJMSF037P05+ GTGCATCAAAACGCTGCTGGACAACGTTGGTGAAGGCGACGGTCAAAAGAAGAAGATTCT
                      ____________________________________________________________
consensus GTGCATCAAAACGCTGCTGGACAACGTTGGTGAAGGCGACGGTCAAAAGAAGAAGATTCT
 
. : . : . : . : . : . :
rJMSF025A21+ GTTGTTCTTGCTGGATCTTCTGAGCAAGTACGGGAAAGCAATCGTGGAACAGAACACCGA
rJMSF037P05+ GTTGTTCTTGCTGGATCTTCTGAGCAAGTACGGGAAAGCAATCGTGGAACAGAACACCGA
                      ____________________________________________________________
consensus GTTGTTCTTGCTGGATCTTCTGAGCAAGTACGGGAAAGCAATCGTGGAACAGAACACCGA
 
. : . : . : . : . : . :
rJMSF025A21+ GAATGGCTACAATAATCTGCAGCGCGATCATCTTTTTCCTGCCCGGGCCAACATATTGAA
rJMSF037P05+ GAATGGCTACAATAATCTGCAGCGCGATCATCTTTTTCCTGCCCGGGCCAACATATTGAA
                      ____________________________________________________________
consensus GAATGGCTACAATAATCTGCAGCGCGATCATCTTTTTCCTGCCCGGGCCAACATATTGAA
 
. : . : . : . : . : . :
rJMSF025A21+ CAGACCGATCCCCCCTGATGTGTTCAAATGCCCCATATCTTCGAGGCTGATGTACGATCC
rJMSF037P05+ CAGACCGATCCCCCCTGATGTGTTCAAATGCCCCATATCTTCGAGGCTGATGTACGATCC
                      ____________________________________________________________
consensus CAGACCGATCCCCCCTGATGTGTTCAAATGCCCCATATCTTCGAGGCTGATGTACGATCC
 
. : . : . : . : . : . :
rJMSF025A21+ TGTCGTGATTGCTTCCGGGGAAACGTTCGAGAGGATGTGGATTCAAAGGTGGTTCGACGC
rJMSF037P05+ TGTCGTGATTGCTTCCGGGGAAACGTTCGAGAGGATGTGGATTCAAAGGTGGTTCGACGC
                      ____________________________________________________________
consensus TGTCGTGATTGCTTCCGGGGAAACGTTCGAGAGGATGTGGATTCAAAGGTGGTTCGACGC
 
. : . : . : . : . : . :
rJMSF025A21+ AGGCCACAACACGTGTCCAAAGACCGGGGAGACGCTTCCCGACTTGACAATAACACCAAA
rJMSF037P05+ AGGCCACAACACGTGTCCAAAGACCGGGGAGACGCTTCCCGACTTGACAATAACACCAAA
                      ____________________________________________________________
consensus AGGCCACAACACGTGTCCAAAGACCGGGGAGACGCTTCCCGACTTGACAATAACACCAAA
 
. : . : . : . : . : . :
rJMSF025A21+ CAACCTGTTGAAGGGTCTGATATTGAAGTGGTGTGCAGAACAGGGAGTTGCTTGTTCTGA
rJMSF037P05+ CAACCTGTTGAAGGGTCTGATATTGAAGTGGTGTGCAGAACAGGGAGTTGCTTGTTCTGA
                      ____________________________________________________________
consensus CAACCTGTTGAAGGGTCTGATATTGAAGTGGTGTGCAGAACAGGGAGTTGCTTGTTCTGA
 
. : . : . : . : . : . :
rJMSF025A21+ TCCTACCACCTGTATATATGATGCAGTTCCTCATTCATGGGAAGCTTCATCTGCTTCCAT
rJMSF037P05+ TCCTACCACCTGTATATATGATGCAGTTCCTCATTCATGGGAAGCTTCATCTGCTTCCAT
                      ____________________________________________________________
consensus TCCTACCACCTGTATATATGATGCAGTTCCTCATTCATGGGAAGCTTCATCTGCTTCCAT
 
. : . : . : . : . : . :
rJMSF025A21+ TGCAAGCCTGAACAGTTATATGGATGGTCTGTCACTTCCCATAGGTTTTAACAATTTGTC
rJMSF037P05+ TGCAAGCCTGAACAGTTATATGGATGGTCTGTCACTTCCCATAGGTTTTAACAATTTGTC
                      ____________________________________________________________
consensus TGCAAGCCTGAACAGTTATATGGATGGTCTGTCACTTCCCATAGGTTTTAACAATTTGTC
 
. : . : . : . : . : . :
rJMSF025A21+ AATTGTTACCAGAGGACCATAGT
rJMSF037P05+ AATTGTTA-CAGAGGACCATAGTTGACACCCTTTTGGAGCATTAGAATAGAATTGTGTTA
                      ____________________________________________________________
consensus AATTGTTACCAGAGGACCATAGTTGACACCCTTTTGGAGCATTAGAATAGAATTGTGTTA
 
. : . : . : . : . : . :
rJMSF037P05+ AGTGTTTTAGAGTTTTTTTTGCCAATGACCTCATGGTCAAAACGATCTAAGGTCACAAGT
                      ____________________________________________________________
consensus AGTGTTTTAGAGTTTTTTTTGCCAATGACCTCATGGTCAAAACGATCTAAGGTCACAAGT