Previous Contig 013121:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF019C20Sequence459005802 (2)gb:AF487527_18042905e-11Nicotiana plumbaginifolia D1 protease-like protein precursor, mRNA, complete cds856013121 (2)gb:AF487527_18042905e-74Nicotiana plumbaginifolia D1 protease-like protein precursor, mRNA, complete cds
JMSF037M24Sequence638005802 (2)gb:AF487527_18042908e-37Nicotiana plumbaginifolia D1 protease-like protein precursor, mRNA, complete cds593013121 (2)gb:AF487527_18042908e-34Nicotiana plumbaginifolia D1 protease-like protein precursor, mRNA, complete cds

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF019C20+ TAAAAGAATTCAATGCATTGCCAGAANGGATTTAGTTACTGCAATGAAGCG
                      ____________________________________________________________
consensus TAAAAGAATTCAATGCATTGCCAGAANGGATTTAGTTACTGCAATGAAGCG
 
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rJMSF019C20+ ACTGCAAGGCANGGTGCCTCATCTTTTGTTCTTGATCTCCGAGATAACCNTGGTGGATTA
                      ____________________________________________________________
consensus ACTGCAAGGCANGGTGCCTCATCTTTTGTTCTTGATCTCCGAGATAACCNTGGTGGATTA
 
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rJMSF019C20+ GTACAGGCTGGTGTTGAAATTGCCAAACTTTTTCTAAATGAAGGGGAGACGGTAACTTAC
                      ____________________________________________________________
consensus GTACAGGCTGGTGTTGAAATTGCCAAACTTTTTCTAAATGAAGGGGAGACGGTAACTTAC
 
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rJMSF019C20+ ACTGTTGGAAGGGACCCACAGTACACACGAAGTATTGTTGCAGAAGCTCCACCTCTAATT
                      ____________________________________________________________
consensus ACTGTTGGAAGGGACCCACAGTACACACGAAGTATTGTTGCAGAAGCTCCACCTCTAATT
 
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rJMSF019C20+ ACTACCCCTGTTATTATTCTGGTGAATAAAAATACAGCAAGTGCCAGTGAAATTGTTGCT
                      ____________________________________________________________
consensus ACTACCCCTGTTATTATTCTGGTGAATAAAAATACAGCAAGTGCCAGTGAAATTGTTGCT
 
. : . : . : . : . : . :
rJMSF019C20+ ACTGCACTTCATGATAACTGCAGAGCTGTCCTTGTTGGGGATCGGACTTATGGAAAGGGC
rJMSF037M24+ TTCATGATAACTGCAGAGCTGTCCTTGTTGGGGATCGGACTTATGGAAAGGGC
                      ____________________________________________________________
consensus ACTGCACTTCATGATAACTGCAGAGCTGTCCTTGTTGGGGATCGGACTTATGGAAAGGGC
 
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rJMSF019C20+ CTGATTCAATCTTTCTTCGAGCTTCAAGATGGGTCGGGTGTAGTTGTTACTATTGGGAAG
rJMSF037M24+ CTGATTCAATCTGTCTTCGAGCTTCAAGATGGGTCGGGTGTAGTTGTTACTATTGGGAAG
                      ____________________________________________________________
consensus CTGATTCAATCTTTCTTCGAGCTTCAAGATGGGTCGGGTGTAGTTGTTACTATTGGGAAG
 
. : . : . : . : . : . :
rJMSF019C20+ TATGTCACACCGAATCACATGGACATTAACGGCAATGGTATTGAGCCTGATTTCAGGAAT
rJMSF037M24+ TATGTCACACCGAATCACATGGACATTAACGGCAATGGTATTGAGCCTGATTTCAGGAAT
                      ____________________________________________________________
consensus TATGTCACACCGAATCACATGGACATTAACGGCAATGGTATTGAGCCTGATTTCAGGAAT
 
. : . : . : . : . : . :
rJMSF019C20+ CTCCCCGCTTGGAACGAAGTCTCCAAACACCTGTCTAAATGTCACAAGCCAAAAGATGGA
rJMSF037M24+ CTCCCCGCTTGGAACGAAGTCTCCAAACACCTGTCTAAATGTCACAAGCCAAAAGATGGA
                      ____________________________________________________________
consensus CTCCCCGCTTGGAACGAAGTCTCCAAACACCTGTCTAAATGTCACAAGCCAAAAGATGGA
 
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rJMSF019C20+ TAGCACCAAGGTTTCCGATGGTTTCGTGGTTCCCGAGCTCTTCCACTTCAGATCATTATC
rJMSF037M24+ TAGCACCAAGGTTTCCGATGGTTTCGTGGTTCCCGAGCTCTTCCACTTCAGATCATTATC
                      ____________________________________________________________
consensus TAGCACCAAGGTTTCCGATGGTTTCGTGGTTCCCGAGCTCTTCCACTTCAGATCATTATC
 
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rJMSF019C20+ CATGTCCGGATGGATTTATCGTTTGGTTCATCTCTTGGACTTCCTTCATTCGGTTCTTTA
rJMSF037M24+ CATGTCCGGATGGATTTATCGTTTGGTTCATCTCTTGGACTTCCTTCATTCGGTTCTTTA
                      ____________________________________________________________
consensus CATGTCCGGATGGATTTATCGTTTGGTTCATCTCTTGGACTTCCTTCATTCGGTTCTTTA
 
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rJMSF019C20+ ATTCCAACCCAAAAACAACATTTACAGCGAAAAGGGACGAAGATGGAAGCAGTTGATTAA
rJMSF037M24+ ATTCCAACCCAAAAACAACATTTACAGCGAAAAGGGACGAAGATGGAAGCAGTTGATTAA
                      ____________________________________________________________
consensus ATTCCAACCCAAAAACAACATTTACAGCGAAAAGGGACGAAGATGGAAGCAGTTGATTAA
 
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rJMSF019C20+ AGTTCACTAAACCAAAAAGCCAACTGGTCATAAGGTGTGATCCTTGCGTGTAAAGGATCT
rJMSF037M24+ AGTTCACTAAACCAAAAAGCCAACTGGTCATAAGGTGTGATCCTTGCGTGTAAAGGATCT
                      ____________________________________________________________
consensus AGTTCACTAAACCAAAAAGCCAACTGGTCATAAGGTGTGATCCTTGCGTGTAAAGGATCT
 
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rJMSF019C20+ GGTAGAAGAAATCTGCCGATTTGTCCTAGGATATTTTGTACATAAAGTGATACTTGCAGT
rJMSF037M24+ GGTAGAAGAAATCTGCCGATTTGTCCTAGGATATTTTGTACATAAAGTGATACTTGCAGT
                      ____________________________________________________________
consensus GGTAGAAGAAATCTGCCGATTTGTCCTAGGATATTTTGTACATAAAGTGATACTTGCAGT
 
. : . : . : . : . : . :
rJMSF019C20+ ATATTGATGTCCATACAGAATCAGA
rJMSF037M24+ ATATTGATGTCCATACAGAATCAGATTATATTCTTTTGAGATGCTTTTGGACTGAAAACC
                      ____________________________________________________________
consensus ATATTGATGTCCATACAGAATCAGATTATATTCTTTTGAGATGCTTTTGGACTGAAAACC