Previous Contig 012973:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF001N06Sequence354004357 (2)717012973 (2)pir|T06594|T065948e-43heat shock protein dnaJ - garden pea>gb:PSDNAJ_1702114 P.sativum mRNA for DnaJ-l
JMSF035F13Sequence669004357 (2)pir|T06594|T065943e-46heat shock protein dnaJ - garden pea>gb:PSDNAJ_1702114 P.sativum mRNA for DnaJ-l724012973 (2)pir|T06594|T065943e-42heat shock protein dnaJ - garden pea>gb:PSDNAJ_1702114 P.sativum mRNA for DnaJ-l

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF001N06+ ATCG
rJMSF035F13+ ATCG
                      ____________________________________________________________
consensus ATCG
 
. : . : . : . : . : . :
rJMSF001N06+ AAGAGATACCAGAGATTCAAAGAGATGGCATAAATCTAATGTCAACAATTTCAATTAGTT
rJMSF035F13+ AAGAGATACCAGAGATTCAAAGAGATGGCATAAATNTAATGTCAACAATTTCAATTAGTT
                      ____________________________________________________________
consensus AAGAGATACCAGAGATTCAAAGAGATGGCATAAATCTAATGTCAACAATTTCAATTAGTT
 
. : . : . : . : . : . :
rJMSF001N06+ ATCTCGATGCGATTCTGGGAACTGTTGTCAAGGTTAAAACAGTTGAAGGTACAACTGAAC
rJMSF035F13+ ATCTCGATGCGATTCTGGGAACTGTTGTCAAGGTTAAAACAGTTGAAGGTACAACTGAAC
                      ____________________________________________________________
consensus ATCTCGATGCGATTCTGGGAACTGTTGTCAAGGTTAAAACAGTTGAAGGTACAACTGAAC
 
. : . : . : . : . : . :
rJMSF001N06+ TCCAGATTCCTCCTGGTACTCAACCTAGCGATGTTCTTGTCTTGGCAAGAAAAGGTGCCC
rJMSF035F13+ TCCAGATTCCTCCTGGTACTCAACCTAGCGATGTTCTTGTCTTGGCAAGAAAAGGTGCCC
                      ____________________________________________________________
consensus TCCAGATTCCTCCTGGTACTCAACCTAGCGATGTTCTTGTCTTGGCAAGAAAAGGTGCCC
 
. : . : . : . : . : . :
rJMSF001N06+ CTAAACTGAATAAGCCCTCAATACGTGGTGATCATTTGTTCACAATAAAAGTTAGTATAC
rJMSF035F13+ CTAAACTGAATAAGCCCTCAATACGTGGTGATCATTTGTTCACAATAAAAGTTAGTATAC
                      ____________________________________________________________
consensus CTAAACTGAATAAGCCCTCAATACGTGGTGATCATTTGTTCACAATAAAAGTTAGTATAC
 
. : . : . : . : . : . :
rJMSF001N06+ CAAAGCGTGTCAGTGCAAAGGAACGTGAGTTGCTTGAGGAACTTGCTTCATTGAATGGCA
rJMSF035F13+ CAAAGCGTGTCAGTGCAAAGGAACGTGAGTTGCTTGAGGAACTTGCTTCATTGAATGGCA
                      ____________________________________________________________
consensus CAAAGCGTGTCAGTGCAAAGGAACGTGAGTTGCTTGAGGAACTTGCTTCATTGAATGGCA
 
. : . : . : . : . : . :
rJMSF001N06+ GCCCAATTGCTCGGACTAAAACTCAGCCCAAGGTTCAGCAAGCTGCTAGAAGTACAGAAA
rJMSF035F13+ GCCCAATTGCTCGGACTAAAACTCAGCCCAAGGTTCAGCAAGCTGCTAGAAGTACAGAAA
                      ____________________________________________________________
consensus GCCCAATTGCTCGGACTAAAACTCAGCCCAAGGTTCAGCAAGCTGCTAGAAGTACAGAAA
 
. : . : . : . : . : . :
rJMSF001N06+ CAAAAATTGATTCTGATTCTGGTACAGAGAAAAGTGATGAATCCGAAGACACAGATGACG
rJMSF035F13+ CAAAAATTGATTCTGATTCTGGTACAGAGAAAAGTGATGAATCCGAAGACACAGATGACG
                      ____________________________________________________________
consensus CAAAAATTGATTCTGATTCTGGTACAGAGAAAAGTGATGAATCCGAAGACACAGATGACG
 
. : . : . : . : . : . :
rJMSF001N06+ TCTGGAAAAAGTTAAAAGATTTTGCTGGGTCTGTTGCAAATGGTGCTCTGAAGTGGTTTA
rJMSF035F13+ TCTGGAAAAAGTTAAAAGATTTTGCTGGGTCTGTTGCAAATGGTGCTCTGAAGTGGTTTA
                      ____________________________________________________________
consensus TCTGGAAAAAGTTAAAAGATTTTGCTGGGTCTGTTGCAAATGGTGCTCTGAAGTGGTTTA
 
. : . : . : . : . : . :
rJMSF001N06+ AAGACAACCTCTGATGGAATGCATCAACATAGCCCCATTTCTTCATTAACCTCACAGGAT
rJMSF035F13+ AAGACAACCTCTGATGGAATGCATCAACATAGCCCCATTTCTTCATTAACCTCACAGGAT
                      ____________________________________________________________
consensus AAGACAACCTCTGATGGAATGCATCAACATAGCCCCATTTCTTCATTAACCTCACAGGAT
 
. : . : . : . : . : . :
rJMSF001N06+ TCAGGATGATGCGTGGAGCAGTTTTCTTTAGATTGAGTTGTGTCAACCCTTTGGGGTAAT
rJMSF035F13+ TCAGGATGATGCGTGGAGCAGTTTTCTTTAGATTGAGTTGTGTCAACCCTTTGGGGTAAT
                      ____________________________________________________________
consensus TCAGGATGATGCGTGGAGCAGTTTTCTTTAGATTGAGTTGTGTCAACCCTTTGGGGTAAT
 
. : . : . : . : . : . :
rJMSF001N06+ TGATTTTCCCACCAACCATTCCTGTAAATTCCAACAATGGCTCAGCCATCCCAGCAAGAG
rJMSF035F13+ TGATTTTCCCACCAACCATTCCTGTAAATTCCAACAATGGCTCAGCCATCCCAGCAAGAG
                      ____________________________________________________________
consensus TGATTTTCCCACCAACCATTCCTGTAAATTCCAACAATGGCTCAGCCATCCCAGCAAGAG
 
. : . : . : . : . : . :
rJMSF001N06+ GTGTTATTACTCATTTCCACCATTTGTGACTGAGATGTGTA-CATGTACAGGAG
rJMSF035F13+ GTGTTATTACTCATTTCCACCATTTGTGACTGAGATGTGTACCATGTACAGGAGGGAACC
                      ____________________________________________________________
consensus GTGTTATTACTCATTTCCACCATTTGTGACTGAGATGTGTACCATGTACAGGAGGGAACC