Previous Contig 012642:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF029E16Sequence701012642 (2)780012642 (2)

Alignment

This contig is upended


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JMSF029E16-                                   GACTGCGATTAAGCAACCTTTCATTCTCATCTTCTC
                      ____________________________________________________________
consensus                                     GACTGCGATTAAGCAACCTTTCATTCTCATCTTCTC
 
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JMSF029E16-           ATTATCGCAGCCTTTGCCTCTTTCTGCTGCAAAGAAATCTTATGATTATTGTTTATTTCT
                      ____________________________________________________________
consensus             ATTATCGCAGCCTTTGCCTCTTTCTGCTGCAAAGAAATCTTATGATTATTGTTTATTTCT
 
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JMSF029E16-           TTCATTAACATCCTATGTGGTTTCACCCACCAACCATTTTTTTCTTAATTTCTGTTCGAG
                      ____________________________________________________________
consensus             TTCATTAACATCCTATGTGGTTTCACCCACCAACCATTTTTTTCTTAATTTCTGTTCGAG
 
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JMSF029E16-           GTTTATATATGTGCATGTTTGAGTGTGGTGTAATAAAAATTATAAAAAGAAAAAAGAAGA
                      ____________________________________________________________
consensus             GTTTATATATGTGCATGTTTGAGTGTGGTGTAATAAAAATTATAAAAAGAAAAAAGAAGA
 
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JMSF029E16-           GAGCTTTCTTCAGTCCAAACATGGGTGGCAGTAGGATTCAATTAGCTTCCGACTCATTCA
                      ____________________________________________________________
consensus             GAGCTTTCTTCAGTCCAAACATGGGTGGCAGTAGGATTCAATTAGCTTCCGACTCATTCA
 
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JMSF029E16-           TCCAAATGCTGAGATGAGATGACGATGAACCCGGCCTTGATGACTAATGAACACTGTCTC
rJMSF029E16+          TCCAAATGCTGAGATGAGATGACGATGAACCCGGCCNTGATGACTAATGAACACTGTCTC
                      ____________________________________________________________
consensus             TCCAAATGCTGAGATGAGATGACGATGAACCCGGCCTTGATGACTAATGAACACTGTCTC
 
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JMSF029E16-           AGTAACTGAGTGAATGATGCGGGAGACAAGTTGGATCTTAAGCTTCCTGTACTTGGACTG
rJMSF029E16+          AGTAACTGAGTGAATGATGCGGGAGACAAGTTGGATCTTAAGCTTCCTGTACTTGGACTG
                      ____________________________________________________________
consensus             AGTAACTGAGTGAATGATGCGGGAGACAAGTTGGATCTTAAGCTTCCTGTACTTGGACTG
 
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JMSF029E16-           AAGGGAGCTCCCTTTTTAACCTTTAATTTTATTTTTCTGTTTATTGCACTTATTTTTACC
rJMSF029E16+          AAGGGAGCTCCCTTTTTAACCTTTAATTTTATTTTTCTGTTTATTGCACTTATTTTTACC
                      ____________________________________________________________
consensus             AAGGGAGCTCCCTTTTTAACCTTTAATTTTATTTTTCTGTTTATTGCACTTATTTTTACC
 
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JMSF029E16-           TTTAATATCTGTCTCTTTGCTAAGTTTCTGCAGATTCTTTGTTCCCTTTTCCACACTAAT
rJMSF029E16+          TTTAATATCTGTCTCTTTGCTAAGTTTCTGCAGATTCTTTGTTCCCTTTTCCACACTAAT
                      ____________________________________________________________
consensus             TTTAATATCTGTCTCTTTGCTAAGTTTCTGCAGATTCTTTGTTCCCTTTTCCACACTAAT
 
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JMSF029E16-           CGATCTGCCCAGCCAGATTCTATTTGGTTTGGTTTAATTTGTTGGTGTTTGCCAGTTACA
rJMSF029E16+          CGATCTGCCCAGCCAGATTCTATTTGGTTTGGTTTAATTTGTTGGTGTTTGCCAGTTACA
                      ____________________________________________________________
consensus             CGATCTGCCCAGCCAGATTCTATTTGGTTTGGTTTAATTTGTTGGTGTTTGCCAGTTACA
 
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JMSF029E16-           TATATAAATACACACATATACGTATAATTAAGTTTCAATTATTTCTGCATATTAATCTTG
rJMSF029E16+          TATATAAATACACACATATACGTATAATTAAGTTTCAATTATTTCTGCATATTAATCTTG
                      ____________________________________________________________
consensus             TATATAAATACACACATATACGTATAATTAAGTTTCAATTATTTCTGCATATTAATCTTG
 
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JMSF029E16-           AAGGCTGGAGAAAGGGTTTTTCATTGGTTAAAATNAGGGTTTTCGCCATTACTTATGCGG
rJMSF029E16+          AAGGCTGGAGAAAGGGTTTTTCATTGGTTAAAATTAGGGTTTTCGCCATTACTTATGCGG
                      ____________________________________________________________
consensus             AAGGCTGGAGAAAGGGTTTTTCATTGGTTAAAATTAGGGTTTTCGCCATTACTTATGCGG
 
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JMSF029E16-           TTGAA                                                       
rJMSF029E16+          TTGAAACTCATATTTGTTTAGTTTTACTGCCGTAATATATGCTGTTTGGCTATCTTGTTT
                      ____________________________________________________________
consensus             TTGAAACTCATATTTGTTTAGTTTTACTGCCGTAATATATGCTGTTTGGCTATCTTGTTT
 
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rJMSF029E16+          TCAAAGCAGTTTATAGTTGACGACAAGAACGGATCTTGGCTAAGGTTTCGCGAGCAGGGA
                      ____________________________________________________________
consensus             TCAAAGCAGTTTATAGTTGACGACAAGAACGGATCTTGGCTAAGGTTTCGCGAGCAGGGA
 
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rJMSF029E16+          GGAGCAGAAAAGGATTGGAACGCTTAACCGGCAAATTAAAGAAACCAAACGCTCAACGAC
                      ____________________________________________________________
consensus             GGAGCAGAAAAGGATTGGAACGCTTAACCGGCAAATTAAAGAAACCAAACGCTCAACGAC
 
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rJMSF029E16+          AACGTCTCCATTCCTGGGCGCTGTTATCGTTGTTTGAACAAGTTCATATGACATTTGTCT
                      ____________________________________________________________
consensus             AACGTCTCCATTCCTGGGCGCTGTTATCGTTGTTTGAACAAGTTCATATGACATTTGTCT
 
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rJMSF029E16+          TCACTGCTGCAGCGGCAACCTAAGTATCATCAATTTAACAATGTTATCAATGGCTAAGCA
                      ____________________________________________________________
consensus             TCACTGCTGCAGCGGCAACCTAAGTATCATCAATTTAACAATGTTATCAATGGCTAAGCA
 
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rJMSF029E16+          GATAGAGATAAATGTTGGTGTGCTTAAAGAATTTGCCCACTTTAGACCACAGTCTCATAC
                      ____________________________________________________________
consensus             GATAGAGATAAATGTTGGTGTGCTTAAAGAATTTGCCCACTTTAGACCACAGTCTCATAC