Previous Contig 012383:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF024P12Sequence644006571 (2)sp|O22493|GSH1_LYCES2e-48Glutamate--cysteine ligase, chloroplast precursor (EC 6.3.2.2) (Gamma- glutamylc785012383 (2)sp|O22493|GSH1_LYCES1e-59Glutamate--cysteine ligase, chloroplast precursor (EC 6.3.2.2) (Gamma- glutamylc
JMSF029C21Sequence647006571 (2)sp|O22493|GSH1_LYCES2e-48Glutamate--cysteine ligase, chloroplast precursor (EC 6.3.2.2) (Gamma- glutamylc687012383 (2)gb:AB158510_15284062e-46Zinnia elegans ZeGSH1 mRNA for gamma-glutamylcysteine synthetase, complete cds.

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF024P12+ GGTGA
                      ____________________________________________________________
consensus GGTGA
 
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rJMSF024P12+ GACTTAAAAGATACTTGGAGATGAGGGGTGCTGACNGAGGANCCGTGGAGGCGGCTATGT
                      ____________________________________________________________
consensus GACTTAAAAGATACTTGGAGATGAGGGGTGCTGACNGAGGANCCGTGGAGGCGGCTATGT
 
. : . : . : . : . : . :
rJMSF029C21+ ATACGATGAGATATCTTTACAAGCTGTTCTG
rJMSF024P12+ GCATTGCCCGCTTTTTGGGTGGGGCTATTATACGATGAGATATCTTTACAAGCTGTTCTG
                      ____________________________________________________________
consensus GCATTGCCCGCTTTTTGGGTGGGGCTATTATACGATGAGATATCTTTACAAGCTGTTCTG
 
. : . : . : . : . : . :
rJMSF029C21+ GACATGACAGCCGATTGGACTTTGGAAGAACGAGAGATGTTGAGGAAGAAGGTGCCAGTA
rJMSF024P12+ GACATGACAGCCGATTGGACTTTGGAAGAACGAGAGATGTTGAGGAAGAAGGTGCCAGTA
                      ____________________________________________________________
consensus GACATGACAGCCGATTGGACTTTGGAAGAACGAGAGATGTTGAGGAAGAAGGTGCCAGTA
 
. : . : . : . : . : . :
rJMSF029C21+ ACTGGTCTAAAGACGCCATTTCGTGATGGGTTGCTGAAGCACGTTGCTCAAGATGTTCTA
rJMSF024P12+ ACTGGTCTAAAGACGCCATTTCGTGATGGGTTGCTGAAGCACGTTGCTCAAGATGTTCTA
                      ____________________________________________________________
consensus ACTGGTCTAAAGACGCCATTTCGTGATGGGTTGCTGAAGCACGTTGCTCAAGATGTTCTA
 
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rJMSF029C21+ AAGCTGGCAAAGGAAGGCTTAGAAAGAAGAGGCTTTAAAGAAACGGGATTTTTGAATGAA
rJMSF024P12+ AAGCTGGCAAAGGAAGGCTTAGAAAGAAGAGGCTTTAAAGAAACGGGATTTTTGAATGAA
                      ____________________________________________________________
consensus AAGCTGGCAAAGGAAGGCTTAGAAAGAAGAGGCTTTAAAGAAACGGGATTTTTGAATGAA
 
. : . : . : . : . : . :
rJMSF029C21+ ATAACCGAGGTTGTCAATACAGGTATTACACCAGCCGAGAAGCTCTTGGACTTGTACCAC
rJMSF024P12+ ATAACCGAGGTTGTCAATACAGGTATTACACCAGCCGAGAAGCTCTTGGACTTGTACCAC
                      ____________________________________________________________
consensus ATAACCGAGGTTGTCAATACAGGTATTACACCAGCCGAGAAGCTCTTGGACTTGTACCAC
 
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rJMSF029C21+ AGGAAGTGGGGACAAAATGTCGATCCAGTATTCGAGGAGCTGCTCTATTGAGGCGCCCGA
rJMSF024P12+ AGGAAGTGGGGACAAAATGTCGATCCAGTATTCGAGGAGCTGCTCTATTGAGGCGCCCGA
                      ____________________________________________________________
consensus AGGAAGTGGGGACAAAATGTCGATCCAGTATTCGAGGAGCTGCTCTATTGAGGCGCCCGA
 
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rJMSF029C21+ GGGTCTCAGGCACAGTATGTACCCCGATACATTTCTGTATTGCGAGTTTGCGACCATCCA
rJMSF024P12+ GGGTCTCAGGCACAGTATGTACCCCGATACATTTCTGTATTGCGAGTTTGCGACCATCCA
                      ____________________________________________________________
consensus GGGTCTCAGGCACAGTATGTACCCCGATACATTTCTGTATTGCGAGTTTGCGACCATCCA
 
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rJMSF029C21+ TCTTTAACACCTAGAGAAATTACCCCCATGCTAACTTTTCTCGATTGCTTTCCGGTAAAG
rJMSF024P12+ TCTTTAACACCTAGAGAAATTACCCCCATGCTAACTTTTCTCGATTGCTTTCCGGTAAAG
                      ____________________________________________________________
consensus TCTTTAACACCTAGAGAAATTACCCCCATGCTAACTTTTCTCGATTGCTTTCCGGTAAAG
 
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rJMSF029C21+ ATTACACAATCCATCTCTGCTATAGCACGATAATGAAACAATGCAGTTGCAATAATACGA
rJMSF024P12+ ATTACACAATCCATCTCTGCTATAGCACGATAATGAAACAATGCAGTTGCAATAATACGA
                      ____________________________________________________________
consensus ATTACACAATCCATCTCTGCTATAGCACGATAATGAAACAATGCAGTTGCAATAATACGA
 
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rJMSF029C21+ GTTTCCCAGAAGATGGGGTTCATTTCTCGTGGGTCGTTTTATGGTCTTTTGCTGTTATTA
rJMSF024P12+ GTTTCCCAGAAGATGGGGTTCATTTCTCGTGGGTCGTTTTATGGTCTTTTGCTGTTATTA
                      ____________________________________________________________
consensus GTTTCCCAGAAGATGGGGTTCATTTCTCGTGGGTCGTTTTATGGTCTTTTGCTGTTATTA
 
. : . : . : . : . : . :
rJMSF029C21+ TTTTTGTCGCTGTTTATGGTGGTTCTGTGATCTGAGCTGAACAATCTGTTGGTGGTTTTG
rJMSF024P12+ TTTTTGTCGCTGTTTATGGTGGTTCTGTGATCTGAGCTGAACAATCTGTTGGTGGTTTTG
                      ____________________________________________________________
consensus TTTTTGTCGCTGTTTATGGTGGTTCTGTGATCTGAGCTGAACAATCTGTTGGTGGTTTTG
 
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rJMSF029C21+ GTGAAGATTACAATCTTCTGTATTTCAAATAGGGTTTTGAAGTTGTTGTTAGAGAT
rJMSF024P12+ GTGAAGATTACAATCTTCTGTATTTCAAATAGGGTTTTGAAGTTGTTGTTAGAGATTGAT
                      ____________________________________________________________
consensus GTGAAGATTACAATCTTCTGTATTTCAAATAGGGTTTTGAAGTTGTTGTTAGAGATTGAT