Previous Contig 012111:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF019P16Sequence445007052 (2)gb:AB026647_15171949e-08Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MJL12.764012111 (2)gb:AB026647_15171944e-21Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MJL12.
JMSF035O20Sequence582007052 (2)gb:AB026647_15171948e-07Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MJL12.393012111 (2)gb:AB026647_15171943e-05Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MJL12.

Alignment

This contig is upended


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rJMSF019P16+ TGAATGCTNGTGCACACAAAGAATTGGTGGGGGAGTTGGAAAGC
                      ____________________________________________________________
consensus TGAATGCTNGTGCACACAAAGAATTGGTGGGGGAGTTGGAAAGC
 
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rJMSF019P16+ ATGGGTAGTGTGAAAGACCAGAAGAAAGTGGAGGCACANGGCACGAATGCCGATAAAGTG
                      ____________________________________________________________
consensus ATGGGTAGTGTGAAAGACCAGAAGAAAGTGGAGGCACANGGCACGAATGCCGATAAAGTG
 
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rJMSF019P16+ GTTGAAAACTTAAAGGTAAGAAATGGATCCAAGGACGAGGAGACAATCGTCAACAAAACA
                      ____________________________________________________________
consensus GTTGAAAACTTAAAGGTAAGAAATGGATCCAAGGACGAGGAGACAATCGTCAACAAAACA
 
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rJMSF019P16+ AAAACAAAAACAAAAACATCAATCCCAAGAAACGATTCTCAGAGTCTGAAAGTGGAGAGT
                      ____________________________________________________________
consensus AAAACAAAAACAAAAACATCAATCCCAAGAAACGATTCTCAGAGTCTGAAAGTGGAGAGT
 
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rJMSF035O20+ GAAAGGAAAAAGAGTGG
rJMSF019P16+ TCAAGAACACTGGATTACAATCTTGCTCACAATGGCTCCATGAGAAAGGAAAAAGAGTGG
                      ____________________________________________________________
consensus TCAAGAACACTGGATTACAATCTTGCTCACAATGGCTCCATGAGAAAGGAAAAAGAGTGG
 
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rJMSF035O20+ AAAAGGACACTGGCGNGCANGCTNTANGNGGAGAGGNACACTAGAGATNTGNGTGGTGAA
rJMSF019P16+ AAAAGGACACTGGCGTGCAAGCTGTACGAGGAGAGGAACACTAGAGATGTGAGTGGTGAA
                      ____________________________________________________________
consensus AAAAGGACACTGGCGTGCAAGCTGTACGAGGAGAGGAACACTAGAGATGTGAGTGGTGAA
 
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rJMSF035O20+ GGGATGGATTTNTTNTGGGANACATACGANATNGAGGCCNTAAAGAGCANGAAGATGGAG
rJMSF019P16+ GGGATGGATTTGTTGTGGGAAACATACGAAATGGAGGCCATAAAGAGCAAGAAGATGGAG
                      ____________________________________________________________
consensus GGGATGGATTTGTTGTGGGAAACATACGAAATGGAGGCCATAAAGAGCAAGAAGATGGAG
 
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rJMSF035O20+ TCGAAGAAGAAGGCGANGANAAAATGGGNNAGCANGAGATATATTANTANGAAGGTGGAG
rJMSF019P16+ TCGAAGAAGAAGGCGAAGAAAAAATGGGAAAGCAAGAGATATAATAATAAGAAGGTGGAG
                      ____________________________________________________________
consensus TCGAAGAAGAAGGCGAAGAAAAAATGGGAAAGCAAGAGATATATTAATAAGAAGGTGGAG
 
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rJMSF035O20+ AGTGAGGNTGAAGAAGANGAAGAAGAAGAGGAAGTGTNTGATCNCCTGTGTNNTTTGCAN
rJMSF019P16+ AGTGAGGATGAAGAAGAAGAAGAAGAAGAGGAAGTGTATGATCAGCTGTGTTGTTTGCAG
                      ____________________________________________________________
consensus AGTGAGGATGAAGAAGAAGAAGAAGAAGAGGAAGTGTATGATCAGCTGTGTTGTTTGCAG
 
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rJMSF035O20+ GCCCTCACGTTNTCNNCTNGGAAAGTGAACTNGGGAATGGGAATTGGAAAGCCNANTCTT
rJMSF019P16+ GCCCTCAAGTTCTCAGCTGGGAAAGTGAACTTGGGAATGGGAATTGGAAAGCCTAATCTT
                      ____________________________________________________________
consensus GCCCTCACGTTCTCAGCTGGGAAAGTGAACTTGGGAATGGGAATTGGAAAGCCTAATCTT
 
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rJMSF035O20+ NTGANGATTTCNAAGGCTATCNAAGGTTTTGGANGGNTTCNTCANGTTAGCACCANGCAC
rJMSF019P16+ ATGAAGATTTCAAAGGCTATCAAAGGTTTTGGATGGCTTCATCATGTTAGCAGCAAGCAC
                      ____________________________________________________________
consensus ATGAAGATTTCAAAGGCTATCAAAGGTTTTGGATGGCTTCATCATGTTAGCAGCAAGCAC
 
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rJMSF035O20+ ACCANGAAGGTGCACA
rJMSF019P16+ AGCAAGAAGGTGCACATTGAAGACAGGTTATAATAATAATAATCAAATTTAATTTTGGTT
                      ____________________________________________________________
consensus AGCAAGAAGGTGCACATTGAAGACAGGTTATAATAATAATAATCAAATTTAATTTTGGTT
 
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rJMSF019P16+ CCTTAGCTTCCATCTTCATCATGCATGTATTTGCTTCCAACTAAATCTCAACCAAGTATA
                      ____________________________________________________________
consensus CCTTAGCTTCCATCTTCATCATGCATGTATTTGCTTCCAACTAAATCTCAACCAAGTATA